Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|7614
Gene name
Location	Contig_997:1741..3182
Strand	+
Gene length (bp)	1441
Transcript length (bp)	1023
Coding sequence length (bp)	1023
Protein length (aa)	341

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01454	MAGE	MAGE homology domain	2.0E-60	89	286

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9Y7U4\|NSE3_SCHPO	Non-structural maintenance of chromosome element 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nse3 PE=1 SV=1	85	298	3.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 27	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|7614 MLSKQTMLEAIVRSLVLRPRTKRAQSQSSTLKVVGDMKDDDDDSEQDAPPRRRPNRNASDDDLDDESTDGLDLNG DSGNEVDVRLAKKLVRYALSCEYSRTAIRRDGIKERVLGNNHGRSFKKVLELAQKQLRAVWGMELRELPVREKMT LHEKRQAMKSASQARGGSGAYILTSTLPEPYRSAAVLRPSKTPGEDDEAIYAGFYTLVLAFIWLSSGELSDQKLR RCLVRLNADRNLADEKTDMTLKRMERQGYVVKKVERPPVGHEAGEPLTTWHVGPRAKEEVGLDGVMGMVREVYGS EWGPDLEAKLHLSLGIKARPGVEGAGGASERRANGGGEAE*
Coding	>Ophun1\|7614 ATGTTGAGCAAACAGACGATGCTAGAAGCAATCGTGAGGTCATTGGTATTGCGACCTCGGACGAAGAGGGCACAA TCGCAATCCTCCACGCTCAAGGTGGTGGGTGACATGAAGGACGACGACGACGACTCAGAACAAGACGCGCCTCCC CGCCGGCGCCCGAACCGCAACGCCTCAGACGATGACCTCGACGACGAATCAACCGACGGCCTCGATCTCAACGGC GACTCTGGCAACGAAGTCGATGTCCGGCTCGCCAAGAAGCTGGTCCGGTACGCCCTCTCGTGCGAGTACTCGCGT ACCGCGATCCGGAGAGATGGCATCAAGGAGAGGGTTCTCGGGAATAATCATGGGCGCTCGTTTAAAAAGGTGTTG GAACTTGCGCAGAAGCAGCTTCGAGCGGTTTGGGGCATGGAGTTGCGCGAACTGCCCGTGCGCGAGAAGATGACT CTTCACGAGAAACGCCAAGCCATGAAGTCGGCCTCGCAGGCTAGGGGAGGATCCGGCGCCTACATTCTGACGTCG ACGCTGCCCGAACCGTACCGAAGCGCGGCGGTGCTGCGACCGTCCAAGACACCAGGCGAGGACGACGAGGCCATC TACGCCGGCTTCTACACCCTGGTCCTGGCCTTTATATGGCTCAGCAGCGGCGAGCTAAGCGACCAGAAGCTCAGA CGTTGCCTCGTCCGGCTCAACGCGGACCGCAACCTGGCCGACGAGAAGACGGACATGACTCTCAAGCGGATGGAG AGGCAGGGCTACGTGGTGAAGAAGGTGGAGAGGCCGCCCGTCGGCCACGAGGCGGGAGAGCCGCTTACGACGTGG CACGTCGGTCCGCGCGCCAAGGAAGAGGTCGGGTTGGATGGCGTCATGGGTATGGTTCGCGAGGTGTATGGCAGC GAATGGGGTCCGGATTTGGAGGCGAAGCTGCATCTGAGCTTGGGGATCAAGGCGCGGCCGGGTGTCGAGGGCGCG GGGGGGGCGAGCGAGAGGCGAGCGAATGGGGGTGGTGAGGCCGAGTGA
Transcript	>Ophun1\|7614 ATGTTGAGCAAACAGACGATGCTAGAAGCAATCGTGAGGTCATTGGTATTGCGACCTCGGACGAAGAGGGCACAA TCGCAATCCTCCACGCTCAAGGTGGTGGGTGACATGAAGGACGACGACGACGACTCAGAACAAGACGCGCCTCCC CGCCGGCGCCCGAACCGCAACGCCTCAGACGATGACCTCGACGACGAATCAACCGACGGCCTCGATCTCAACGGC GACTCTGGCAACGAAGTCGATGTCCGGCTCGCCAAGAAGCTGGTCCGGTACGCCCTCTCGTGCGAGTACTCGCGT ACCGCGATCCGGAGAGATGGCATCAAGGAGAGGGTTCTCGGGAATAATCATGGGCGCTCGTTTAAAAAGGTGTTG GAACTTGCGCAGAAGCAGCTTCGAGCGGTTTGGGGCATGGAGTTGCGCGAACTGCCCGTGCGCGAGAAGATGACT CTTCACGAGAAACGCCAAGCCATGAAGTCGGCCTCGCAGGCTAGGGGAGGATCCGGCGCCTACATTCTGACGTCG ACGCTGCCCGAACCGTACCGAAGCGCGGCGGTGCTGCGACCGTCCAAGACACCAGGCGAGGACGACGAGGCCATC TACGCCGGCTTCTACACCCTGGTCCTGGCCTTTATATGGCTCAGCAGCGGCGAGCTAAGCGACCAGAAGCTCAGA CGTTGCCTCGTCCGGCTCAACGCGGACCGCAACCTGGCCGACGAGAAGACGGACATGACTCTCAAGCGGATGGAG AGGCAGGGCTACGTGGTGAAGAAGGTGGAGAGGCCGCCCGTCGGCCACGAGGCGGGAGAGCCGCTTACGACGTGG CACGTCGGTCCGCGCGCCAAGGAAGAGGTCGGGTTGGATGGCGTCATGGGTATGGTTCGCGAGGTGTATGGCAGC GAATGGGGTCCGGATTTGGAGGCGAAGCTGCATCTGAGCTTGGGGATCAAGGCGCGGCCGGGTGTCGAGGGCGCG GGGGGGGCGAGCGAGAGGCGAGCGAATGGGGGTGGTGAGGCCGAGTGA
Gene	>Ophun1\|7614 ATGTTGAGCAAACAGACGATGCTAGAAGCAATCGTGAGGTCATTGGTATTGCGACCTCGGACGAAGAGGGCACAA TCGCAATCCTCCACGCTCAAGGTGGTGGGTGACATGAAGGTGAGAAGAGAAAGCTCTTCACAGGGATCGTCAAGA ATTTTTGCGGCGATAAGGGTGCTGATAAGCGATAAGCTGATAAGCCTTTTTTGGTCTTGGCGCGTCTCTTCGCGT CTTGATGAGAGATCAGCAGCAGTCCGTTTCATTATAGGCATTTATCTTGAGGGCGGTCGCAGCATAAGCGCAGCC AGAGATACCGCTTCATCTCGTTTCAATCTCATATCCGAACCGGAAGAATGCCTCCGCAAAGGAGAAGACGCCCGG TAACCCCCGCGTCTCCCGCCCAGACTGCCCAACTAACCACGACGACCAGGACGACGACGACGACTCAGAACAAGA CGCGCCTCCCCGCCGGCGCCCGAACCGCAACGCCTCAGACGATGACCTCGACGACGAATCAACCGACGGCCTCGA TCTCAACGGCGACTCTGGCAACGAAGTCGATGTCCGGCTCGCCAAGAAGCTGGTCCGGTACGCCCTCTCGTGCGA GTACTCGCGTACCGCGATCCGGAGAGATGGCATCAAGGAGAGGGGTAGGTCTCTTCTTTGTGTTTTGGCTTGGTC TTTCGCTGATGTTGTCGTGCAAGTTCTCGGGAATAATCATGGGCGCTCGTTTAAAAAGGTGTTGGAACTTGCGCA GAAGCAGCTTCGAGCGGTTTGGGGCATGGAGTTGCGCGAACTGCCCGTGCGCGAGAAGATGACTCTTCACGAGAA ACGCCAAGGTCAGTTTGACCATATCTCGCGCGACAAGTACACAGATTGACAGTACGATGCAGCCATGAAGTCGGC CTCGCAGGCTAGGGGAGGATCCGGCGCCTACATTCTGACGTCGACGCTGCCCGAACCGTACCGAAGCGCGGCGGT GCTGCGACCGTCCAAGACACCAGGCGAGGACGACGAGGCCATCTACGCCGGCTTCTACACCCTGGTCCTGGCCTT TATATGGCTCAGCAGCGGCGAGCTAAGCGACCAGAAGCTCAGACGTTGCCTCGTCCGGCTCAACGCGGACCGCAA CCTGGCCGACGAGAAGACGGACATGACTCTCAAGCGGATGGAGAGGCAGGGCTACGTGGTGAAGAAGGTGGAGAG GCCGCCCGTCGGCCACGAGGCGGGAGAGCCGCTTACGACGTGGCACGTCGGTCCGCGCGCCAAGGAAGAGGTCGG GTTGGATGGCGTCATGGGTATGGTTCGCGAGGTGTATGGCAGCGAATGGGGTCCGGATTTGGAGGCGAAGCTGCA TCTGAGCTTGGGGATCAAGGCGCGGCCGGGTGTCGAGGGCGCGGGGGGGGCGAGCGAGAGGCGAGCGAATGGGGG TGGTGAGGCCGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail