© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|7576 |
| Gene name | |
| Location | Contig_98:37927..39276 |
| Strand | + |
| Gene length (bp) | 1349 |
| Transcript length (bp) | 1260 |
| Coding sequence length (bp) | 1260 |
| Protein length (aa) | 420 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01494 | FAD_binding_3 | FAD binding domain | 1.3E-09 | 5 | 355 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 2.2E-05 | 8 | 38 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4B1Y1|A2462_ARTBC | Probable FAD-dependent monooxygenase OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02462 PE=3 SV=1 | 6 | 414 | 4.0E-90 |
| sp|Q0JCU7|ZEP_ORYSJ | Zeaxanthin epoxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=ZEP PE=2 SV=1 | 5 | 400 | 6.0E-10 |
| sp|Q53552|NHG2_PSEPU | Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=4 SV=1 | 3 | 348 | 6.0E-09 |
| sp|P23262|NHG1_PSEPU | Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=1 SV=4 | 100 | 348 | 6.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0071949 | FAD binding | Yes |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0003674 | molecular_function | No |
| GO:0000166 | nucleotide binding | No |
| GO:0050660 | flavin adenine dinucleotide binding | No |
| GO:0036094 | small molecule binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 3894 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|7576 MDAHRVIICGAGITGLVLAHALAKAGIAFDVYERDAHINDRRHGWGITFHWALPYLREMLDDETLAAIDDVQVDP EVGRHDTGNFLFLNLASLDVKFKVPPNERRRVNRQRLRQALVRGVADHVHWGKHLVGIEPPTNDPTLVRAIFADG TDARGRLLVGADGTGSLTRQFLVPDGHRNHRLPVRMLGVSVDLSPAEAQPLRDLDPLLFMGCHPETGHFLWVSIL DTPDTNGSRGTAAEYYRIQVIISWLADLDGNDSPSTTTTTDGSRLAEMKQRATGFHPRLKTLVESVPSSTAVTEI VLQDWPCHQAWNNHGGRVTLVGDAAHAMTMYRGEAANHGILDVWHLSRGIIQSSQQQQQQQQQQPQAQAQAVAAY EAEMRARAVPAVLLSRQACLDAHRYHALDENSALLKRRALQPAE* |
| Coding | >Ophun1|7576 ATGGATGCCCACCGCGTCATCATCTGTGGCGCAGGCATCACCGGCCTCGTGCTCGCCCACGCGCTGGCCAAGGCC GGCATCGCCTTCGACGTCTACGAGCGCGATGCGCACATCAACGACCGTCGCCATGGCTGGGGCATCACCTTTCAC TGGGCACTGCCGTACCTGAGAGAGATGCTAGATGACGAGACTCTTGCAGCCATAGACGACGTCCAGGTTGATCCC GAGGTCGGCCGCCACGACACGGGCAACTTCCTCTTCCTCAACCTGGCCAGCCTCGACGTCAAGTTCAAGGTGCCG CCCAACGAGCGCCGACGAGTCAACCGCCAGCGGCTGCGTCAGGCCCTCGTCCGGGGCGTCGCCGACCACGTCCAT TGGGGCAAACATCTGGTCGGCATCGAGCCCCCGACAAACGACCCGACTCTCGTCCGCGCCATCTTCGCCGACGGC ACCGACGCCCGCGGCCGGCTTCTCGTGGGCGCCGACGGGACCGGCTCACTGACACGGCAGTTCCTCGTCCCGGAC GGACACAGAAACCACAGGCTCCCCGTCCGGATGCTGGGCGTCTCTGTCGATCTCTCCCCCGCCGAGGCCCAGCCT CTCCGCGACCTCGACCCGCTGCTCTTCATGGGCTGTCATCCGGAGACGGGCCACTTCCTCTGGGTATCGATCCTC GACACGCCCGACACCAACGGCTCTCGCGGAACGGCAGCCGAATACTACCGCATTCAGGTCATCATCTCATGGCTC GCAGACCTCGACGGCAACGACAGCCCATCAACAACGACGACCACCGACGGCAGCCGCCTCGCCGAGATGAAGCAA CGAGCAACCGGCTTCCACCCGCGCCTGAAAACCCTCGTCGAATCCGTCCCCTCGTCAACCGCCGTAACAGAAATC GTCCTCCAAGACTGGCCCTGCCATCAAGCATGGAACAACCACGGCGGAAGAGTAACGCTGGTAGGCGACGCCGCC CACGCAATGACCATGTACCGCGGCGAAGCAGCCAACCACGGCATCCTCGACGTCTGGCACCTCTCGCGCGGCATC ATCCAAAGCAGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACAAGCACAAGCACAAGCCGTCGCCGCCTAC GAAGCCGAGATGCGCGCCCGCGCCGTCCCCGCCGTCCTCCTCAGCCGACAGGCCTGCCTCGACGCCCACCGTTAC CACGCCCTGGACGAGAACTCGGCCCTTTTGAAGAGGCGCGCCCTGCAGCCTGCCGAGTGA |
| Transcript | >Ophun1|7576 ATGGATGCCCACCGCGTCATCATCTGTGGCGCAGGCATCACCGGCCTCGTGCTCGCCCACGCGCTGGCCAAGGCC GGCATCGCCTTCGACGTCTACGAGCGCGATGCGCACATCAACGACCGTCGCCATGGCTGGGGCATCACCTTTCAC TGGGCACTGCCGTACCTGAGAGAGATGCTAGATGACGAGACTCTTGCAGCCATAGACGACGTCCAGGTTGATCCC GAGGTCGGCCGCCACGACACGGGCAACTTCCTCTTCCTCAACCTGGCCAGCCTCGACGTCAAGTTCAAGGTGCCG CCCAACGAGCGCCGACGAGTCAACCGCCAGCGGCTGCGTCAGGCCCTCGTCCGGGGCGTCGCCGACCACGTCCAT TGGGGCAAACATCTGGTCGGCATCGAGCCCCCGACAAACGACCCGACTCTCGTCCGCGCCATCTTCGCCGACGGC ACCGACGCCCGCGGCCGGCTTCTCGTGGGCGCCGACGGGACCGGCTCACTGACACGGCAGTTCCTCGTCCCGGAC GGACACAGAAACCACAGGCTCCCCGTCCGGATGCTGGGCGTCTCTGTCGATCTCTCCCCCGCCGAGGCCCAGCCT CTCCGCGACCTCGACCCGCTGCTCTTCATGGGCTGTCATCCGGAGACGGGCCACTTCCTCTGGGTATCGATCCTC GACACGCCCGACACCAACGGCTCTCGCGGAACGGCAGCCGAATACTACCGCATTCAGGTCATCATCTCATGGCTC GCAGACCTCGACGGCAACGACAGCCCATCAACAACGACGACCACCGACGGCAGCCGCCTCGCCGAGATGAAGCAA CGAGCAACCGGCTTCCACCCGCGCCTGAAAACCCTCGTCGAATCCGTCCCCTCGTCAACCGCCGTAACAGAAATC GTCCTCCAAGACTGGCCCTGCCATCAAGCATGGAACAACCACGGCGGAAGAGTAACGCTGGTAGGCGACGCCGCC CACGCAATGACCATGTACCGCGGCGAAGCAGCCAACCACGGCATCCTCGACGTCTGGCACCTCTCGCGCGGCATC ATCCAAAGCAGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACAAGCACAAGCACAAGCCGTCGCCGCCTAC GAAGCCGAGATGCGCGCCCGCGCCGTCCCCGCCGTCCTCCTCAGCCGACAGGCCTGCCTCGACGCCCACCGTTAC CACGCCCTGGACGAGAACTCGGCCCTTTTGAAGAGGCGCGCCCTGCAGCCTGCCGAGTGA |
| Gene | >Ophun1|7576 ATGGATGCCCACCGCGTCATCATCTGTGGCGCAGGCATCACCGGCCTCGTGCTCGCCCACGCGCTGGCCAAGGTA TGATGACGACCAAGACGACGGTGAAGAGAAGAAAGAAGAAAGGAAGAAACCCCCAAAAAGGCCTCTCCGCTGACG TAGGTATGCAGGCCGGCATCGCCTTCGACGTCTACGAGCGCGATGCGCACATCAACGACCGTCGCCATGGCTGGG GCATCACCTTTCACTGGGCACTGCCGTACCTGAGAGAGATGCTAGATGACGAGACTCTTGCAGCCATAGACGACG TCCAGGTTGATCCCGAGGTCGGCCGCCACGACACGGGCAACTTCCTCTTCCTCAACCTGGCCAGCCTCGACGTCA AGTTCAAGGTGCCGCCCAACGAGCGCCGACGAGTCAACCGCCAGCGGCTGCGTCAGGCCCTCGTCCGGGGCGTCG CCGACCACGTCCATTGGGGCAAACATCTGGTCGGCATCGAGCCCCCGACAAACGACCCGACTCTCGTCCGCGCCA TCTTCGCCGACGGCACCGACGCCCGCGGCCGGCTTCTCGTGGGCGCCGACGGGACCGGCTCACTGACACGGCAGT TCCTCGTCCCGGACGGACACAGAAACCACAGGCTCCCCGTCCGGATGCTGGGCGTCTCTGTCGATCTCTCCCCCG CCGAGGCCCAGCCTCTCCGCGACCTCGACCCGCTGCTCTTCATGGGCTGTCATCCGGAGACGGGCCACTTCCTCT GGGTATCGATCCTCGACACGCCCGACACCAACGGCTCTCGCGGAACGGCAGCCGAATACTACCGCATTCAGGTCA TCATCTCATGGCTCGCAGACCTCGACGGCAACGACAGCCCATCAACAACGACGACCACCGACGGCAGCCGCCTCG CCGAGATGAAGCAACGAGCAACCGGCTTCCACCCGCGCCTGAAAACCCTCGTCGAATCCGTCCCCTCGTCAACCG CCGTAACAGAAATCGTCCTCCAAGACTGGCCCTGCCATCAAGCATGGAACAACCACGGCGGAAGAGTAACGCTGG TAGGCGACGCCGCCCACGCAATGACCATGTACCGCGGCGAAGCAGCCAACCACGGCATCCTCGACGTCTGGCACC TCTCGCGCGGCATCATCCAAAGCAGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACAAGCACAAGCACAAG CCGTCGCCGCCTACGAAGCCGAGATGCGCGCCCGCGCCGTCCCCGCCGTCCTCCTCAGCCGACAGGCCTGCCTCG ACGCCCACCGTTACCACGCCCTGGACGAGAACTCGGCCCTTTTGAAGAGGCGCGCCCTGCAGCCTGCCGAGTGA |