Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|7543
Gene name
Location	Contig_97:23842..25281
Strand	+
Gene length (bp)	1439
Transcript length (bp)	1386
Coding sequence length (bp)	1386
Protein length (aa)	462

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00498	FHA	FHA domain	2.2E-12	366	445

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q8BIZ6\|SNIP1_MOUSE	Smad nuclear-interacting protein 1 OS=Mus musculus GN=Snip1 PE=1 SV=1	167	455	1.0E-37
sp\|Q5M9G6\|SNIP1_RAT	Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1 PE=1 SV=1	167	460	2.0E-37
sp\|Q8TAD8\|SNIP1_HUMAN	Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1	202	455	3.0E-35
sp\|Q8W4D8\|DDL_ARATH	FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL PE=1 SV=1	280	455	3.0E-31
sp\|Q54VU4\|Y8013_DICDI	Probable serine/threonine-protein kinase DDB_G0280133 OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1	299	455	2.0E-23

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q8BIZ6\|SNIP1_MOUSE	Smad nuclear-interacting protein 1 OS=Mus musculus GN=Snip1 PE=1 SV=1	167	455	1.0E-37
sp\|Q5M9G6\|SNIP1_RAT	Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1 PE=1 SV=1	167	460	2.0E-37
sp\|Q8TAD8\|SNIP1_HUMAN	Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1	202	455	3.0E-35
sp\|Q8W4D8\|DDL_ARATH	FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL PE=1 SV=1	280	455	3.0E-31
sp\|Q54VU4\|Y8013_DICDI	Probable serine/threonine-protein kinase DDB_G0280133 OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1	299	455	2.0E-23
sp\|Q07930\|PML1_YEAST	Pre-mRNA leakage protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PML1 PE=1 SV=1	302	446	2.0E-13

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GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|7543 MTTNTIADASGIAETDDARKAVADVTNRVMIIVRAVQLPIIDDKTLVTTGAREALHLIVDVTKTVAIVTTSVRIV EDLFIDAKLLLTGVRTVERRATILVTALAARGLPMNDAETTIGPERETNARGMAAIAVSIVMSVTWKDAGDRPSD EQRDERYDDDHEGRLWPRYMSSSSSEYYGDTEEDSYDDSYRRGRDWTDDDDRDDHQDDRSSEHSHDEDDNSSDDR SYRRGGSTHRRDDEGGRRGRSRDERRVWNSDDEMTSESDNESRHRMEHRAPLASQQESFAIARGDAPSDATQPRE RPNLASTGTLAAASNSVAHDDGSSTVLKYQEPAEARAPPAREQWRLFVFKDGEVTDEIALSIKSCWLVGRNSRVV DVLAPNPTVSKQHAVIQFRLVEKRNRYGDTVGETKPYLVDLESGGGTFLNGKLVPKGRYIELRSQDLLMFASSKR EYVIMLAPNDD*
Coding	>Ophun1\|7543 ATGACGACGAATACGATCGCGGACGCGAGCGGCATCGCGGAGACAGACGACGCACGGAAGGCCGTGGCCGACGTT ACGAATCGCGTCATGATTATCGTTCGCGCAGTTCAGCTTCCTATTATCGACGACAAGACTCTTGTGACGACCGGC GCTCGCGAAGCCCTGCATCTGATCGTCGACGTTACGAAAACCGTGGCCATCGTGACAACCAGCGTTCGCATAGTA GAAGATCTTTTCATCGACGCGAAACTGTTGTTAACAGGCGTTCGCACAGTCGAGAGGCGCGCTACGATTCTCGTG ACCGCTCTCGCAGCCCGCGGTCTTCCCATGAACGACGCCGAGACGACTATCGGGCCCGAGAGAGAGACGAACGCG AGAGGCATGGCGGCCATCGCAGTCAGCATCGTCATGAGCGTGACTTGGAAAGACGCGGGAGACCGGCCCAGCGAC GAACAGCGAGACGAAAGATATGACGACGACCATGAGGGAAGGCTGTGGCCTAGGTACATGAGCTCCTCATCCTCC GAATATTATGGTGATACTGAGGAAGACTCCTATGATGACAGTTATCGCCGAGGAAGAGACTGGACCGACGACGAT GATCGCGATGATCATCAGGATGATAGGTCCAGCGAACATAGCCACGACGAGGACGATAATTCCTCTGATGATCGA AGCTACAGACGGGGTGGAAGCACACACAGACGCGATGACGAAGGTGGTCGACGTGGTCGCTCGCGAGACGAAAGG CGAGTCTGGAACTCGGACGACGAGATGACTTCTGAGTCTGACAATGAGTCAAGACACCGAATGGAGCATCGTGCG CCCCTTGCCTCGCAGCAAGAATCCTTCGCGATCGCGCGGGGAGACGCGCCCAGCGACGCGACCCAGCCTAGGGAG AGGCCCAACTTGGCCAGCACGGGCACCCTGGCTGCCGCTTCCAACTCGGTCGCCCACGACGACGGCTCGTCCACA GTCCTCAAGTACCAAGAGCCGGCCGAGGCGCGCGCGCCACCGGCACGCGAACAGTGGAGGCTCTTTGTCTTCAAA GATGGTGAAGTCACGGACGAGATTGCGCTGAGCATCAAGAGCTGCTGGCTCGTCGGTCGAAACTCACGCGTCGTC GACGTGCTGGCGCCGAACCCCACCGTTAGCAAGCAACATGCCGTCATCCAGTTTCGCCTTGTGGAGAAGCGCAAC AGATATGGCGACACGGTTGGCGAGACGAAGCCCTATCTTGTCGACTTGGAGAGCGGAGGCGGTACCTTTCTCAAT GGCAAGCTTGTGCCAAAGGGCCGATACATCGAGCTCCGATCCCAAGACTTGCTCATGTTTGCAAGCAGCAAGCGG GAATACGTGATCATGCTGGCCCCCAATGATGATTGA
Transcript	>Ophun1\|7543 ATGACGACGAATACGATCGCGGACGCGAGCGGCATCGCGGAGACAGACGACGCACGGAAGGCCGTGGCCGACGTT ACGAATCGCGTCATGATTATCGTTCGCGCAGTTCAGCTTCCTATTATCGACGACAAGACTCTTGTGACGACCGGC GCTCGCGAAGCCCTGCATCTGATCGTCGACGTTACGAAAACCGTGGCCATCGTGACAACCAGCGTTCGCATAGTA GAAGATCTTTTCATCGACGCGAAACTGTTGTTAACAGGCGTTCGCACAGTCGAGAGGCGCGCTACGATTCTCGTG ACCGCTCTCGCAGCCCGCGGTCTTCCCATGAACGACGCCGAGACGACTATCGGGCCCGAGAGAGAGACGAACGCG AGAGGCATGGCGGCCATCGCAGTCAGCATCGTCATGAGCGTGACTTGGAAAGACGCGGGAGACCGGCCCAGCGAC GAACAGCGAGACGAAAGATATGACGACGACCATGAGGGAAGGCTGTGGCCTAGGTACATGAGCTCCTCATCCTCC GAATATTATGGTGATACTGAGGAAGACTCCTATGATGACAGTTATCGCCGAGGAAGAGACTGGACCGACGACGAT GATCGCGATGATCATCAGGATGATAGGTCCAGCGAACATAGCCACGACGAGGACGATAATTCCTCTGATGATCGA AGCTACAGACGGGGTGGAAGCACACACAGACGCGATGACGAAGGTGGTCGACGTGGTCGCTCGCGAGACGAAAGG CGAGTCTGGAACTCGGACGACGAGATGACTTCTGAGTCTGACAATGAGTCAAGACACCGAATGGAGCATCGTGCG CCCCTTGCCTCGCAGCAAGAATCCTTCGCGATCGCGCGGGGAGACGCGCCCAGCGACGCGACCCAGCCTAGGGAG AGGCCCAACTTGGCCAGCACGGGCACCCTGGCTGCCGCTTCCAACTCGGTCGCCCACGACGACGGCTCGTCCACA GTCCTCAAGTACCAAGAGCCGGCCGAGGCGCGCGCGCCACCGGCACGCGAACAGTGGAGGCTCTTTGTCTTCAAA GATGGTGAAGTCACGGACGAGATTGCGCTGAGCATCAAGAGCTGCTGGCTCGTCGGTCGAAACTCACGCGTCGTC GACGTGCTGGCGCCGAACCCCACCGTTAGCAAGCAACATGCCGTCATCCAGTTTCGCCTTGTGGAGAAGCGCAAC AGATATGGCGACACGGTTGGCGAGACGAAGCCCTATCTTGTCGACTTGGAGAGCGGAGGCGGTACCTTTCTCAAT GGCAAGCTTGTGCCAAAGGGCCGATACATCGAGCTCCGATCCCAAGACTTGCTCATGTTTGCAAGCAGCAAGCGG GAATACGTGATCATGCTGGCCCCCAATGATGATTGA
Gene	>Ophun1\|7543 ATGACGACGAATACGATCGCGGACGCGAGCGGCATCGCGGAGACAGACGACGCACGGAAGGCCGTGGCCGACGTT ACGAATCGCGTCATGATTATCGTTCGCGCAGTTCAGCTTCCTATTATCGACGACAAGACTCTTGTGACGACCGGC GCTCGCGAAGCCCTGCATCTGATCGTCGACGTTACGAAAACCGTGGCCATCGTGACAACCAGCGTTCGCATAGTA GAAGATCTTTTCATCGACGCGAAACTGTTGTTAACAGGCGTTCGCACAGTCGAGAGGCGCGCTACGATTCTCGTG ACCGCTCTCGCAGCCCGCGGTCTTCCCATGAACGACGCCGAGACGACTATCGGGCCCGAGAGAGAGACGAACGCG AGAGGCATGGCGGCCATCGCAGTCAGCATCGTCATGAGCGTGACTTGGAAAGACGCGGGAGGTACGACGATGATC ACTACTACCGTCGTACTATTGAAGTTAACGGCAGACGAGACCGGCCCAGCGACGAACAGCGAGACGAAAGATATG ACGACGACCATGAGGGAAGGCTGTGGCCTAGGTACATGAGCTCCTCATCCTCCGAATATTATGGTGATACTGAGG AAGACTCCTATGATGACAGTTATCGCCGAGGAAGAGACTGGACCGACGACGATGATCGCGATGATCATCAGGATG ATAGGTCCAGCGAACATAGCCACGACGAGGACGATAATTCCTCTGATGATCGAAGCTACAGACGGGGTGGAAGCA CACACAGACGCGATGACGAAGGTGGTCGACGTGGTCGCTCGCGAGACGAAAGGCGAGTCTGGAACTCGGACGACG AGATGACTTCTGAGTCTGACAATGAGTCAAGACACCGAATGGAGCATCGTGCGCCCCTTGCCTCGCAGCAAGAAT CCTTCGCGATCGCGCGGGGAGACGCGCCCAGCGACGCGACCCAGCCTAGGGAGAGGCCCAACTTGGCCAGCACGG GCACCCTGGCTGCCGCTTCCAACTCGGTCGCCCACGACGACGGCTCGTCCACAGTCCTCAAGTACCAAGAGCCGG CCGAGGCGCGCGCGCCACCGGCACGCGAACAGTGGAGGCTCTTTGTCTTCAAAGATGGTGAAGTCACGGACGAGA TTGCGCTGAGCATCAAGAGCTGCTGGCTCGTCGGTCGAAACTCACGCGTCGTCGACGTGCTGGCGCCGAACCCCA CCGTTAGCAAGCAACATGCCGTCATCCAGTTTCGCCTTGTGGAGAAGCGCAACAGATATGGCGACACGGTTGGCG AGACGAAGCCCTATCTTGTCGACTTGGAGAGCGGAGGCGGTACCTTTCTCAATGGCAAGCTTGTGCCAAAGGGCC GATACATCGAGCTCCGATCCCAAGACTTGCTCATGTTTGCAAGCAGCAAGCGGGAATACGTGATCATGCTGGCCC CCAATGATGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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