Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|7513
Gene name
Location	Contig_96:23445..24555
Strand	-
Gene length (bp)	1110
Transcript length (bp)	1005
Coding sequence length (bp)	1005
Protein length (aa)	335

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13532	2OG-FeII_Oxy_2	2OG-Fe(II) oxygenase superfamily	1.0E-27	81	298

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9SIE0\|ALKB2_ARATH	DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana GN=ALKBH2 PE=2 SV=2	80	301	5.0E-24
sp\|Q6NS38\|ALKB2_HUMAN	DNA oxidative demethylase ALKBH2 OS=Homo sapiens GN=ALKBH2 PE=1 SV=1	160	302	1.0E-22
sp\|Q58DM4\|ALKB2_BOVIN	DNA oxidative demethylase ALKBH2 OS=Bos taurus GN=ALKBH2 PE=2 SV=1	160	301	2.0E-21
sp\|Q6P6J4\|ALKB2_MOUSE	DNA oxidative demethylase ALKBH2 OS=Mus musculus GN=Alkbh2 PE=1 SV=1	160	301	2.0E-20
sp\|Q5XIC8\|ALKB3_RAT	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Rattus norvegicus GN=Alkbh3 PE=2 SV=1	174	298	4.0E-19

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9SIE0\|ALKB2_ARATH	DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana GN=ALKBH2 PE=2 SV=2	80	301	5.0E-24
sp\|Q6NS38\|ALKB2_HUMAN	DNA oxidative demethylase ALKBH2 OS=Homo sapiens GN=ALKBH2 PE=1 SV=1	160	302	1.0E-22
sp\|Q58DM4\|ALKB2_BOVIN	DNA oxidative demethylase ALKBH2 OS=Bos taurus GN=ALKBH2 PE=2 SV=1	160	301	2.0E-21
sp\|Q6P6J4\|ALKB2_MOUSE	DNA oxidative demethylase ALKBH2 OS=Mus musculus GN=Alkbh2 PE=1 SV=1	160	301	2.0E-20
sp\|Q5XIC8\|ALKB3_RAT	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Rattus norvegicus GN=Alkbh3 PE=2 SV=1	174	298	4.0E-19
sp\|Q96Q83\|ALKB3_HUMAN	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Homo sapiens GN=ALKBH3 PE=1 SV=1	170	298	5.0E-19
sp\|Q32L00\|ALKB3_BOVIN	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Bos taurus GN=ALKBH3 PE=2 SV=1	174	298	1.0E-18
sp\|Q8K1E6\|ALKB3_MOUSE	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Mus musculus GN=Alkbh3 PE=1 SV=1	174	298	1.0E-18

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 36	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|7513 MSASKKRTLDAFFSPAPKRNKAGEEEEAAAASDDEGAAVVVSSHANYPFSIADLPVSLSVGMASVPARPSRSVND QPDLDLVYFEPYIPTRVARELFNFLRAELPFYRVEYDIKRKGVQTHVRTPRWTTVFGLDDTCYFGDDGCPLEKST NLPVHDKRYIAVPPRPIPECLDRLRTSVESATGCCFNFCLVNYYASGSDSIAFHSDDERFLGKDPAIASISLGAR RDFLLKYKPPQTSQPSLQPVAPPMRNLTELRFPLGSGDMMLMRGRTQSSWLHSIPKRTGKNQEDGGRINITFRRA MIKEGTVNYYRYNVGTGPVYRWDRDSRQMTPWKS*
Coding	>Ophun1\|7513 ATGTCAGCGTCCAAGAAGCGAACTCTCGACGCCTTCTTCAGCCCGGCGCCGAAGCGGAACAAAGCTGGTGAGGAG GAGGAGGCGGCGGCGGCCAGCGACGATGAAGGCGCGGCCGTTGTCGTCTCCAGCCATGCAAACTATCCGTTTTCG ATAGCAGATCTTCCCGTGTCGCTCAGCGTGGGTATGGCATCGGTGCCGGCAAGGCCCAGTCGGTCTGTCAACGAT CAGCCGGATCTTGATCTCGTTTACTTCGAGCCCTATATCCCGACACGTGTTGCTAGGGAACTGTTCAACTTTTTG CGTGCCGAGCTTCCTTTCTACCGAGTCGAGTACGATATCAAGAGAAAGGGCGTACAGACTCACGTGCGGACGCCG AGATGGACGACCGTCTTCGGCCTCGACGATACTTGCTACTTTGGTGACGATGGCTGCCCCCTTGAAAAGTCGACT AACCTCCCCGTCCACGATAAGCGCTACATCGCCGTCCCTCCTCGTCCCATCCCCGAATGTCTCGACCGTCTACGC ACATCGGTCGAATCCGCTACCGGCTGCTGCTTCAACTTCTGCCTGGTCAACTACTACGCTTCCGGCTCAGACAGC ATCGCCTTCCACAGCGACGACGAGAGGTTCCTCGGCAAGGATCCGGCCATCGCGTCCATTTCTCTCGGCGCCCGT CGTGACTTTCTCCTCAAGTACAAGCCGCCGCAGACTTCGCAGCCGTCGCTGCAGCCCGTTGCGCCCCCGATGCGC AACCTTACCGAGTTACGATTTCCGCTCGGCAGCGGCGACATGATGTTGATGCGAGGCCGGACGCAGTCGAGCTGG CTTCACTCCATCCCAAAGAGGACCGGCAAGAACCAGGAGGATGGCGGCAGGATCAACATTACGTTTCGCAGGGCC ATGATAAAGGAGGGTACGGTGAATTACTACCGCTACAACGTTGGCACCGGGCCCGTCTATCGCTGGGACCGGGAC AGCCGCCAGATGACGCCATGGAAGTCGTGA
Transcript	>Ophun1\|7513 ATGTCAGCGTCCAAGAAGCGAACTCTCGACGCCTTCTTCAGCCCGGCGCCGAAGCGGAACAAAGCTGGTGAGGAG GAGGAGGCGGCGGCGGCCAGCGACGATGAAGGCGCGGCCGTTGTCGTCTCCAGCCATGCAAACTATCCGTTTTCG ATAGCAGATCTTCCCGTGTCGCTCAGCGTGGGTATGGCATCGGTGCCGGCAAGGCCCAGTCGGTCTGTCAACGAT CAGCCGGATCTTGATCTCGTTTACTTCGAGCCCTATATCCCGACACGTGTTGCTAGGGAACTGTTCAACTTTTTG CGTGCCGAGCTTCCTTTCTACCGAGTCGAGTACGATATCAAGAGAAAGGGCGTACAGACTCACGTGCGGACGCCG AGATGGACGACCGTCTTCGGCCTCGACGATACTTGCTACTTTGGTGACGATGGCTGCCCCCTTGAAAAGTCGACT AACCTCCCCGTCCACGATAAGCGCTACATCGCCGTCCCTCCTCGTCCCATCCCCGAATGTCTCGACCGTCTACGC ACATCGGTCGAATCCGCTACCGGCTGCTGCTTCAACTTCTGCCTGGTCAACTACTACGCTTCCGGCTCAGACAGC ATCGCCTTCCACAGCGACGACGAGAGGTTCCTCGGCAAGGATCCGGCCATCGCGTCCATTTCTCTCGGCGCCCGT CGTGACTTTCTCCTCAAGTACAAGCCGCCGCAGACTTCGCAGCCGTCGCTGCAGCCCGTTGCGCCCCCGATGCGC AACCTTACCGAGTTACGATTTCCGCTCGGCAGCGGCGACATGATGTTGATGCGAGGCCGGACGCAGTCGAGCTGG CTTCACTCCATCCCAAAGAGGACCGGCAAGAACCAGGAGGATGGCGGCAGGATCAACATTACGTTTCGCAGGGCC ATGATAAAGGAGGGTACGGTGAATTACTACCGCTACAACGTTGGCACCGGGCCCGTCTATCGCTGGGACCGGGAC AGCCGCCAGATGACGCCATGGAAGTCGTGA
Gene	>Ophun1\|7513 ATGTCAGCGTCCAAGAAGCGAACTCTCGACGCCTTCTTCAGCCCGGCGCCGAAGCGGAACAAAGCTGGTGAGGAG GAGGAGGCGGCGGCGGCCAGCGACGATGAAGGCGCGGTAAGTCAATCTCTTTTTCGAGACGCGTGAGCTTGTTGC TGATGAACTGAGGGGAAAGGCCGTTGTCGTCTCCAGCCATGCAAACTATCCGTTTTCGATAGCAGATCTTCCCGT GTCGCTCAGCGTGGGTATGGCATCGGTGCCGGCAAGGCCCAGTCGGTCTGTCAACGATCAGCCGGATCTTGATCT CGTTTACTTCGAGCCCTATATCCCGACACGTGTTGCTAGGGAACTGTTCAACTTTTTGCGTGCCGAGCTTCCTTT CTACCGAGTCGAGTACGATATCAAGAGAAAGGGCGTACAGACTCACGTGCGGACGCCGAGGTTTGTCTGCCTCCC AGACCTTGAGAATTCACGCTGACGCGGGCCAGATGGACGACCGTCTTCGGCCTCGACGATACTTGCTACTTTGGT GACGATGGCTGCCCCCTTGAAAAGTCGACTAACCTCCCCGTCCACGATAAGCGCTACATCGCCGTCCCTCCTCGT CCCATCCCCGAATGTCTCGACCGTCTACGCACATCGGTCGAATCCGCTACCGGCTGCTGCTTCAACTTCTGCCTG GTCAACTACTACGCTTCCGGCTCAGACAGCATCGCCTTCCACAGCGACGACGAGAGGTTCCTCGGCAAGGATCCG GCCATCGCGTCCATTTCTCTCGGCGCCCGTCGTGACTTTCTCCTCAAGTACAAGCCGCCGCAGACTTCGCAGCCG TCGCTGCAGCCCGTTGCGCCCCCGATGCGCAACCTTACCGAGTTACGATTTCCGCTCGGCAGCGGCGACATGATG TTGATGCGAGGCCGGACGCAGTCGAGCTGGCTTCACTCCATCCCAAAGAGGACCGGCAAGAACCAGGAGGATGGC GGCAGGATCAACATTACGTTTCGCAGGGCCATGATAAAGGAGGGTACGGTGAATTACTACCGCTACAACGTTGGC ACCGGGCCCGTCTATCGCTGGGACCGGGACAGCCGCCAGATGACGCCATGGAAGTCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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