Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|7465
Gene name
LocationContig_942:3283..4774
Strand+
Gene length (bp)1491
Transcript length (bp)1326
Coding sequence length (bp)1326
Protein length (aa) 442

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00789 UBX UBX domain 1.9E-14 267 345

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P34631|UBXN4_CAEEL UBX domain-containing protein 4 OS=Caenorhabditis elegans GN=ubxn-4 PE=3 SV=1 2 346 3.0E-18
sp|P38349|UBX7_YEAST UBX domain-containing protein 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX7 PE=1 SV=1 2 350 8.0E-18
sp|P47049|UBX6_YEAST UBX domain-containing protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX6 PE=1 SV=1 203 416 1.0E-11
sp|Q5HZY0|UBXN4_RAT UBX domain-containing protein 4 OS=Rattus norvegicus GN=Ubxn4 PE=1 SV=1 1 347 7.0E-11
sp|Q8VCH8|UBXN4_MOUSE UBX domain-containing protein 4 OS=Mus musculus GN=Ubxn4 PE=1 SV=1 1 347 2.0E-10
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P34631|UBXN4_CAEEL UBX domain-containing protein 4 OS=Caenorhabditis elegans GN=ubxn-4 PE=3 SV=1 2 346 3.0E-18
sp|P38349|UBX7_YEAST UBX domain-containing protein 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX7 PE=1 SV=1 2 350 8.0E-18
sp|P47049|UBX6_YEAST UBX domain-containing protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX6 PE=1 SV=1 203 416 1.0E-11
sp|Q5HZY0|UBXN4_RAT UBX domain-containing protein 4 OS=Rattus norvegicus GN=Ubxn4 PE=1 SV=1 1 347 7.0E-11
sp|Q8VCH8|UBXN4_MOUSE UBX domain-containing protein 4 OS=Mus musculus GN=Ubxn4 PE=1 SV=1 1 347 2.0E-10
sp|Q3ZBU9|UBXN4_BOVIN UBX domain-containing protein 4 OS=Bos taurus GN=UBXN4 PE=2 SV=2 1 347 9.0E-10
sp|Q6NXA9|UBXN1_DANRE UBX domain-containing protein 1 OS=Danio rerio GN=ubxn1 PE=2 SV=1 114 345 2.0E-08
sp|Q922Y1|UBXN1_MOUSE UBX domain-containing protein 1 OS=Mus musculus GN=Ubxn1 PE=1 SV=1 213 345 2.0E-07
sp|Q32KW2|UBXN1_BOVIN UBX domain-containing protein 1 OS=Bos taurus GN=UBXN1 PE=2 SV=1 213 345 2.0E-07
sp|Q499N6|UBXN1_RAT UBX domain-containing protein 1 OS=Rattus norvegicus GN=Ubxn1 PE=3 SV=2 213 345 3.0E-07
sp|Q6GL77|UBXN1_XENTR UBX domain-containing protein 1 OS=Xenopus tropicalis GN=ubxn1 PE=2 SV=1 203 345 3.0E-07
sp|Q6IP50|UBX1A_XENLA UBX domain-containing protein 1-A OS=Xenopus laevis GN=ubxn1-a PE=2 SV=1 196 345 8.0E-07
sp|Q6GLV4|UBX1B_XENLA UBX domain-containing protein 1-B OS=Xenopus laevis GN=ubxn1-b PE=2 SV=1 196 345 2.0E-06
sp|Q04323|UBXN1_HUMAN UBX domain-containing protein 1 OS=Homo sapiens GN=UBXN1 PE=1 SV=2 213 345 2.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|7465
MFFSGSLQEGISAAVEQQKMIVCFVTNDNEESRLWENDFLREASLGELIENNAVALRLEAGSPSAAYLAELFPLP
QTPTVVLIKHGELKDYIASGTVKDDFVRRVRAALDVSPPPAPSTATPAAAPASAPVQAEETASSTASDMRNVHSV
LAERVAKLKAKKEEADRRAKDERAEAKAKAAAEAEAGADTEAARSHRQAELVRKQRQQKDEERRRILARIENDKQ
ERRQRAAQRQQMRADALPTGDVASSLVKAPESKLPSTTRISDMASIQVRLFDGSTMRNRFKTCAPFTQVRGWVDD
KRTDGSVPYTFRQLLTPRPNTAIDETDEAKTLSDLGLAPSSTLILIPVQTFSTAYEANKPQSWLSRFVAAISGLL
LWLASFVPLGFARRTTGSAPVVESSSGRTRRRISGFDDVVDPSKDQQLYNGNSLNFEPRPDEQDDA*
Coding >Ophun1|7465
ATGTTCTTCTCGGGTTCGCTGCAGGAGGGCATCTCTGCCGCTGTCGAGCAGCAGAAGATGATAGTCTGCTTTGTG
ACGAACGACAACGAGGAGAGCAGACTATGGGAGAACGACTTTCTCCGGGAAGCCTCGCTGGGCGAGTTGATTGAG
AATAACGCCGTCGCTCTTCGTCTCGAAGCAGGTTCCCCGTCGGCGGCCTACCTTGCGGAGCTGTTTCCTCTGCCC
CAGACACCCACCGTCGTCCTCATCAAGCACGGCGAGCTAAAGGATTATATCGCTTCCGGGACTGTCAAGGATGAC
TTTGTGCGTCGAGTGCGGGCCGCCTTGGACGTGTCACCTCCGCCTGCCCCGTCGACGGCTACCCCAGCTGCCGCA
CCCGCGTCCGCACCGGTCCAAGCTGAAGAGACAGCATCTTCTACTGCTTCGGACATGCGCAACGTACACAGCGTC
CTCGCCGAGAGGGTAGCCAAGCTAAAGGCCAAAAAGGAAGAGGCAGACCGCAGGGCAAAGGACGAACGTGCCGAG
GCCAAGGCCAAGGCAGCAGCCGAAGCCGAAGCCGGCGCCGATACCGAAGCCGCCAGATCCCATCGACAGGCTGAA
TTGGTCCGCAAACAACGACAGCAAAAGGATGAAGAGCGCAGACGAATCCTCGCCCGTATCGAAAACGACAAGCAG
GAGAGACGCCAGCGAGCCGCTCAGCGACAACAGATGCGCGCAGACGCCCTCCCAACAGGAGACGTCGCGTCCTCG
CTCGTCAAGGCGCCAGAGTCGAAGCTCCCGTCGACGACGCGCATCAGCGACATGGCCTCGATCCAAGTCCGGCTC
TTTGACGGCTCAACGATGAGAAACCGCTTCAAGACGTGCGCGCCTTTCACCCAGGTGCGAGGCTGGGTAGACGAC
AAGCGCACCGACGGCTCCGTGCCCTACACATTCCGACAGCTCCTGACGCCGAGGCCCAACACGGCCATTGACGAG
ACGGACGAGGCCAAGACGCTCTCGGATCTGGGTCTCGCCCCTTCGTCTACGCTCATCCTCATCCCCGTGCAGACT
TTCTCAACGGCCTACGAGGCCAATAAGCCGCAGAGCTGGCTGTCCCGTTTCGTGGCTGCCATCTCGGGCCTTCTT
CTCTGGCTGGCTTCTTTTGTGCCGCTCGGGTTTGCGAGGCGGACGACGGGCTCGGCGCCTGTGGTGGAGTCTTCG
TCTGGGCGGACGCGTCGACGTATAAGCGGGTTCGATGACGTTGTTGACCCTTCCAAGGATCAGCAGCTTTACAAT
GGGAACTCGTTGAACTTTGAGCCGAGGCCGGATGAACAGGATGATGCATAG
Transcript >Ophun1|7465
ATGTTCTTCTCGGGTTCGCTGCAGGAGGGCATCTCTGCCGCTGTCGAGCAGCAGAAGATGATAGTCTGCTTTGTG
ACGAACGACAACGAGGAGAGCAGACTATGGGAGAACGACTTTCTCCGGGAAGCCTCGCTGGGCGAGTTGATTGAG
AATAACGCCGTCGCTCTTCGTCTCGAAGCAGGTTCCCCGTCGGCGGCCTACCTTGCGGAGCTGTTTCCTCTGCCC
CAGACACCCACCGTCGTCCTCATCAAGCACGGCGAGCTAAAGGATTATATCGCTTCCGGGACTGTCAAGGATGAC
TTTGTGCGTCGAGTGCGGGCCGCCTTGGACGTGTCACCTCCGCCTGCCCCGTCGACGGCTACCCCAGCTGCCGCA
CCCGCGTCCGCACCGGTCCAAGCTGAAGAGACAGCATCTTCTACTGCTTCGGACATGCGCAACGTACACAGCGTC
CTCGCCGAGAGGGTAGCCAAGCTAAAGGCCAAAAAGGAAGAGGCAGACCGCAGGGCAAAGGACGAACGTGCCGAG
GCCAAGGCCAAGGCAGCAGCCGAAGCCGAAGCCGGCGCCGATACCGAAGCCGCCAGATCCCATCGACAGGCTGAA
TTGGTCCGCAAACAACGACAGCAAAAGGATGAAGAGCGCAGACGAATCCTCGCCCGTATCGAAAACGACAAGCAG
GAGAGACGCCAGCGAGCCGCTCAGCGACAACAGATGCGCGCAGACGCCCTCCCAACAGGAGACGTCGCGTCCTCG
CTCGTCAAGGCGCCAGAGTCGAAGCTCCCGTCGACGACGCGCATCAGCGACATGGCCTCGATCCAAGTCCGGCTC
TTTGACGGCTCAACGATGAGAAACCGCTTCAAGACGTGCGCGCCTTTCACCCAGGTGCGAGGCTGGGTAGACGAC
AAGCGCACCGACGGCTCCGTGCCCTACACATTCCGACAGCTCCTGACGCCGAGGCCCAACACGGCCATTGACGAG
ACGGACGAGGCCAAGACGCTCTCGGATCTGGGTCTCGCCCCTTCGTCTACGCTCATCCTCATCCCCGTGCAGACT
TTCTCAACGGCCTACGAGGCCAATAAGCCGCAGAGCTGGCTGTCCCGTTTCGTGGCTGCCATCTCGGGCCTTCTT
CTCTGGCTGGCTTCTTTTGTGCCGCTCGGGTTTGCGAGGCGGACGACGGGCTCGGCGCCTGTGGTGGAGTCTTCG
TCTGGGCGGACGCGTCGACGTATAAGCGGGTTCGATGACGTTGTTGACCCTTCCAAGGATCAGCAGCTTTACAAT
GGGAACTCGTTGAACTTTGAGCCGAGGCCGGATGAACAGGATGATGCATAG
Gene >Ophun1|7465
ATGTTCTTCTCGGGTTCGCTGCAGGAGGGCATCTCTGCCGCTGTCGAGCAGCAGAAGATGATAGTCTGCTTTGTG
ACGAGTCAGTTTGCTGTGTCGTTTGCATTAGGGTGGCGAGCTGACCGGCGTTTACCTCGTGGCTTCAGACGACAA
CGAGGAGAGCAGACTATGGGAGAACGACTTTCTCCGGGAAGCCTCGGTATGCCGTTTGCTTCAGAGATGCAACAT
TTTGAGATTCTGACTTGAGAAGCTGGGCGAGTTGATTGAGAATAACGCCGTCGCTCTTCGTCTCGAAGCAGGTTC
CCCGTCGGCGGCCTACCTTGCGGAGCTGTTTCCTCTGCCCCAGACACCCACCGTCGTCCTCATCAAGCACGGCGA
GCTAAAGGATTATATCGCTTCCGGGACTGTCAAGGATGACTTTGTGCGTCGAGTGCGGGCCGCCTTGGACGTGTC
ACCTCCGCCTGCCCCGTCGACGGCTACCCCAGCTGCCGCACCCGCGTCCGCACCGGTCCAAGCTGAAGAGACAGC
ATCTTCTACTGCTTCGGACATGCGCAACGTACACAGCGTCCTCGCCGAGAGGGTAGCCAAGCTAAAGGCCAAAAA
GGAAGAGGCAGACCGCAGGGCAAAGGACGAACGTGCCGAGGCCAAGGCCAAGGCAGCAGCCGAAGCCGAAGCCGG
CGCCGATACCGAAGCCGCCAGATCCCATCGACAGGCTGAATTGGTCCGCAAACAACGACAGCAAAAGGATGAAGA
GCGCAGACGAATCCTCGCCCGTATCGAAAACGACAAGCAGGAGAGACGCCAGCGAGCCGCTCAGCGACAACAGAT
GCGCGCAGACGCCCTCCCAACAGGAGACGTCGCGTCCTCGCTCGTCAAGGCGCCAGAGTCGAAGCTCCCGTCGAC
GACGCGCATCAGCGACATGGCCTCGATCCAAGTCCGGCTCTTTGACGGCTCAACGATGAGAAACCGCTTCAAGAC
GTGCGCGCCTTTCACCCAGGTGCGAGGCTGGGTAGACGACAAGCGCACCGACGGCTCCGTGCCCTACACATTCCG
ACAGCTCCTGACGCCGAGGCCCAACACGGCCATTGACGAGACGGACGAGGCCAAGACGCTCTCGGATCTGGGTCT
CGCCCCTTCGTCTACGCTCATCCTCATCCCCGTGCAGACTTTCTCAACGGCCTACGAGGCCAATAAGCCGCAGAG
CTGGCTGTCCCGTTTCGTGGCTGCCATCTCGGGCCTTCTTCTCTGGCTGGCTTCTTTTGTGCCGCTCGGGTTTGC
GAGGCGGACGACGGGCTCGGCGCCTGTGGTGGAGTCTTCGTCTGGGCGGACGCGTCGACGTATAAGCGGGTTCGA
TGACGTTGTTGACCCTTCCAAGGATCAGCAGCTTTACAATGGGAACTCGGTTAGTTGATCCTTATTGAGCTAGGA
AGGAGTTGACTGACATGAGAGTAGTTGAACTTTGAGCCGAGGCCGGATGAACAGGATGATGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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