© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|7446 |
| Gene name | |
| Location | Contig_939:855..2398 |
| Strand | + |
| Gene length (bp) | 1543 |
| Transcript length (bp) | 1332 |
| Coding sequence length (bp) | 1332 |
| Protein length (aa) | 444 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01170 | UPF0020 | Putative RNA methylase family UPF0020 | 8.8E-07 | 181 | 295 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12463|TRM11_YEAST | tRNA (guanine(10)-N2)-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRM11 PE=1 SV=1 | 2 | 396 | 1.0E-101 |
| sp|O94636|TRM11_SCHPO | tRNA (guanine(10)-N2)-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trm11 PE=3 SV=2 | 3 | 406 | 6.0E-93 |
| sp|Q7Z4G4|TRM11_HUMAN | tRNA (guanine(10)-N2)-methyltransferase homolog OS=Homo sapiens GN=TRMT11 PE=1 SV=1 | 3 | 399 | 6.0E-69 |
| sp|Q6NS23|TRM11_XENLA | tRNA (guanine(10)-N2)-methyltransferase homolog OS=Xenopus laevis GN=trmt11 PE=2 SV=1 | 2 | 436 | 2.0E-68 |
| sp|Q5R962|TRM11_PONAB | tRNA (guanine(10)-N2)-methyltransferase homolog OS=Pongo abelii GN=TRMT11 PE=2 SV=1 | 3 | 399 | 2.0E-68 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12463|TRM11_YEAST | tRNA (guanine(10)-N2)-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRM11 PE=1 SV=1 | 2 | 396 | 1.0E-101 |
| sp|O94636|TRM11_SCHPO | tRNA (guanine(10)-N2)-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trm11 PE=3 SV=2 | 3 | 406 | 6.0E-93 |
| sp|Q7Z4G4|TRM11_HUMAN | tRNA (guanine(10)-N2)-methyltransferase homolog OS=Homo sapiens GN=TRMT11 PE=1 SV=1 | 3 | 399 | 6.0E-69 |
| sp|Q6NS23|TRM11_XENLA | tRNA (guanine(10)-N2)-methyltransferase homolog OS=Xenopus laevis GN=trmt11 PE=2 SV=1 | 2 | 436 | 2.0E-68 |
| sp|Q5R962|TRM11_PONAB | tRNA (guanine(10)-N2)-methyltransferase homolog OS=Pongo abelii GN=TRMT11 PE=2 SV=1 | 3 | 399 | 2.0E-68 |
| sp|Q7TNK6|TRM11_RAT | tRNA (guanine(10)-N2)-methyltransferase homolog OS=Rattus norvegicus GN=Trmt11 PE=2 SV=1 | 3 | 401 | 1.0E-66 |
| sp|Q05B63|TRM11_BOVIN | tRNA (guanine(10)-N2)-methyltransferase homolog OS=Bos taurus GN=TRMT11 PE=2 SV=1 | 3 | 401 | 3.0E-66 |
| sp|Q9CWH5|TRM11_MOUSE | tRNA (guanine(10)-N2)-methyltransferase homolog OS=Mus musculus GN=Trmt11 PE=1 SV=1 | 3 | 401 | 2.0E-65 |
| sp|Q6YJI5|TRM11_CHICK | tRNA (guanine(10)-N2)-methyltransferase homolog OS=Gallus gallus GN=TRMT11 PE=2 SV=1 | 11 | 401 | 6.0E-63 |
| sp|Q54QA6|TRM11_DICDI | tRNA (guanine(10)-N2)-methyltransferase homolog OS=Dictyostelium discoideum GN=trmt11 PE=3 SV=1 | 2 | 399 | 2.0E-62 |
| sp|O26820|TMG10_METTH | tRNA (guanine(10)-N2)-dimethyltransferase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=trmG10 PE=3 SV=1 | 1 | 294 | 1.0E-11 |
| sp|P05409|TMG10_METTL | Probable tRNA (guanine(10)-N2)-dimethyltransferase (Fragment) OS=Methanothermococcus thermolithotrophicus GN=trmG10 PE=3 SV=1 | 193 | 294 | 2.0E-08 |
| Orthofinder run ID | 4 |
| Orthogroup | 4404 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|7446 MEFLIKFAQTHETFRLAELNALAVIEDVDLTIVESSLLSPLCLVRLPSAEAAQRLIRRSILAQSIHEFWGSGQDL DALHESVKERSQHLWPQYLQPSFKFVFESYQGARSDVLKLSIINSFGYLPFKGPIRMSRPDHVFTIFELWPYDSP VLGIENPDMMYLGRLVACSSRDVILRFDLKKRSYISTTSMDSELSLVTANIALAAPGKLFYDPFVGTGSFPIACA HFGAVGWGSDIDGRVIRGTGGCKSLKGNFEQYGLTNHVGDFFAADLINTPIKETHRLWDGIVCDPPYGVREGLRV LGIRDPTKTPWLVEKGIIQAALPDFVPPKKPYSFMAMLDDILAFASATLVDDGRLSFWMPTANDEQEIPVPSHPC LSLVVVCVQNFNKWSRRLITYRRIPDSQVSRPALEAYRSRSSAQETGKTADDLNPFRRGYFRKFEAED* |
| Coding | >Ophun1|7446 ATGGAGTTCCTCATAAAATTCGCCCAGACGCACGAGACGTTTCGGTTGGCCGAGCTCAACGCGTTGGCCGTCATT GAGGACGTTGATTTGACTATCGTCGAGTCCAGCTTACTGTCACCGTTGTGCCTCGTTCGGCTCCCTTCGGCCGAG GCAGCGCAGAGGCTCATAAGACGCTCCATCCTGGCGCAATCGATTCACGAATTCTGGGGGTCGGGCCAAGATCTG GATGCTCTGCACGAGTCTGTCAAGGAGCGGTCGCAGCATCTCTGGCCTCAGTATTTACAACCATCTTTTAAATTC GTCTTCGAGTCCTACCAGGGCGCGCGCTCCGATGTTCTAAAACTGTCCATCATCAACTCGTTCGGCTACCTGCCA TTTAAGGGCCCTATTCGCATGTCTCGCCCAGACCACGTCTTCACCATCTTCGAGTTATGGCCGTACGACAGCCCT GTTCTCGGCATCGAGAACCCGGACATGATGTACCTCGGTCGTTTAGTTGCCTGCTCATCGCGTGATGTTATCCTT CGGTTCGATCTCAAAAAGCGAAGCTACATTTCTACCACCAGTATGGACTCTGAGCTGTCACTTGTGACGGCCAAC ATTGCCTTGGCTGCCCCAGGAAAGCTCTTCTACGACCCCTTCGTCGGCACTGGCTCCTTCCCCATTGCCTGTGCG CACTTCGGCGCCGTCGGATGGGGTAGCGATATTGACGGACGTGTCATCCGCGGCACCGGTGGCTGCAAGAGCCTG AAAGGCAACTTTGAGCAGTACGGCCTCACCAACCACGTGGGCGACTTCTTCGCCGCCGATCTCATCAACACGCCC ATCAAAGAGACTCATAGGTTATGGGATGGCATTGTGTGCGATCCACCCTACGGCGTGCGTGAAGGGCTGAGGGTG CTCGGTATCAGAGATCCGACCAAGACGCCCTGGCTGGTGGAAAAGGGCATTATTCAGGCGGCTCTGCCGGATTTC GTGCCCCCAAAGAAACCATACAGCTTCATGGCCATGCTCGACGACATACTCGCTTTCGCGTCGGCGACCTTGGTC GATGACGGGAGACTGTCCTTTTGGATGCCGACGGCCAATGACGAGCAGGAGATCCCGGTGCCGTCTCACCCGTGC CTCAGTCTCGTCGTCGTCTGCGTCCAGAACTTCAACAAGTGGTCGAGGCGATTAATCACGTACCGGCGCATTCCC GATAGCCAAGTGTCCCGGCCTGCCCTGGAAGCCTACCGTTCTCGCAGCAGCGCCCAAGAGACGGGAAAGACTGCA GACGATCTGAATCCGTTTCGTCGTGGTTACTTTAGGAAGTTCGAGGCAGAAGACTAG |
| Transcript | >Ophun1|7446 ATGGAGTTCCTCATAAAATTCGCCCAGACGCACGAGACGTTTCGGTTGGCCGAGCTCAACGCGTTGGCCGTCATT GAGGACGTTGATTTGACTATCGTCGAGTCCAGCTTACTGTCACCGTTGTGCCTCGTTCGGCTCCCTTCGGCCGAG GCAGCGCAGAGGCTCATAAGACGCTCCATCCTGGCGCAATCGATTCACGAATTCTGGGGGTCGGGCCAAGATCTG GATGCTCTGCACGAGTCTGTCAAGGAGCGGTCGCAGCATCTCTGGCCTCAGTATTTACAACCATCTTTTAAATTC GTCTTCGAGTCCTACCAGGGCGCGCGCTCCGATGTTCTAAAACTGTCCATCATCAACTCGTTCGGCTACCTGCCA TTTAAGGGCCCTATTCGCATGTCTCGCCCAGACCACGTCTTCACCATCTTCGAGTTATGGCCGTACGACAGCCCT GTTCTCGGCATCGAGAACCCGGACATGATGTACCTCGGTCGTTTAGTTGCCTGCTCATCGCGTGATGTTATCCTT CGGTTCGATCTCAAAAAGCGAAGCTACATTTCTACCACCAGTATGGACTCTGAGCTGTCACTTGTGACGGCCAAC ATTGCCTTGGCTGCCCCAGGAAAGCTCTTCTACGACCCCTTCGTCGGCACTGGCTCCTTCCCCATTGCCTGTGCG CACTTCGGCGCCGTCGGATGGGGTAGCGATATTGACGGACGTGTCATCCGCGGCACCGGTGGCTGCAAGAGCCTG AAAGGCAACTTTGAGCAGTACGGCCTCACCAACCACGTGGGCGACTTCTTCGCCGCCGATCTCATCAACACGCCC ATCAAAGAGACTCATAGGTTATGGGATGGCATTGTGTGCGATCCACCCTACGGCGTGCGTGAAGGGCTGAGGGTG CTCGGTATCAGAGATCCGACCAAGACGCCCTGGCTGGTGGAAAAGGGCATTATTCAGGCGGCTCTGCCGGATTTC GTGCCCCCAAAGAAACCATACAGCTTCATGGCCATGCTCGACGACATACTCGCTTTCGCGTCGGCGACCTTGGTC GATGACGGGAGACTGTCCTTTTGGATGCCGACGGCCAATGACGAGCAGGAGATCCCGGTGCCGTCTCACCCGTGC CTCAGTCTCGTCGTCGTCTGCGTCCAGAACTTCAACAAGTGGTCGAGGCGATTAATCACGTACCGGCGCATTCCC GATAGCCAAGTGTCCCGGCCTGCCCTGGAAGCCTACCGTTCTCGCAGCAGCGCCCAAGAGACGGGAAAGACTGCA GACGATCTGAATCCGTTTCGTCGTGGTTACTTTAGGAAGTTCGAGGCAGAAGACTAG |
| Gene | >Ophun1|7446 ATGGAGTTCCTCATAAAATTCGCCCAGACGCACGAGACGTTTCGGTTGGCCGAGCTCAACGCGTTGGCCGTCATT GAGGACGTTGATTTGACTATCGTCGAGTCCAGCTTACTGGTGAGCTCGATTAGTACAGTAGTTCGGCGGCCTAGA CGCGTAATCTCACTAAGTGGAGGGCAGTCACCGTTGTGCCTCGTTCGGCTCCCTTCGGCCGAGGCAGCGCAGAGG CTCATAAGACGCTCCATCCTGGCGCAATCGATTCACGAATTCTGGGGGTCGGGCCAAGATCTGGATGCTCTGCAC GAGTCTGTCAAGGAGCGGTCGCAGCATCTCTGGCCTCAGTATTTACAACCATCTTTTAAATTCGTCTTCGAGTCC TACCAGGGCGCGCGCTCCGATGTTCTAAAACTGTCCATCATCAACTCGTTCGGCTACCTGCCATTTAAGGGCCCT ATTCGCATGTCTCGCCCAGACCACGTCTTCACCATCTTCGAGTTATGGCCGTACGACAGCCCTGTTCTCGGCATC GAGAACCCGGACATGATGTACCTCGGTCGTTTAGTTGCCTGCTCATCGCGTGATGTTATCCTTCGGTTCGATCTC AAAAAGCGAAGCTACATTTCTACCACCAGTATGGACTCTGAGCTGTCACTTGTGACGGCCAACATTGCCTTGGCT GCCCCAGGAAAGCTCTTCTACGACCCCTTCGTCGGCACTGGCTCCTTCCCCATTGCCTGTGCGCACTTCGGCGCC GTCGGATGGGGTAGCGATATTGACGGACGTGTCATCCGCGGCACCGGTGGCTGCAAGAGCCTGAAAGGCAACTTT GAGCAGTACGGCCTCACCAACCACGTGGGCGACTTCTTCGCCGCCGATCTCATCAACACGCCCATCAAAGAGACT CATAGGTTATGGGATGGCATTGTGTGCGATCCACCCTACGGCGTGCGTGAAGGGCTGAGGGTGCTCGGTATCAGA GATCCGACCAAGACGCCCTGGCTGGTGGAAAAGGGCATTATTCAGGCGGCGTATGTATTCCTCTCGTTCCCACAC GCGACGCATCGCTCTGGAGATATTGACAATGACCGTTACCTTTCCAGTCTGCCGGATTTCGTGCCCCCAAAGAAA CCATACAGCTTCATGGCCATGCTCGACGACATACTCGCTTTCGCGTCGGCGACCTTGGTCGATGACGGGAGACTG TCCTTTTGGATGCCGACGGCCAATGACGAGCAGGAGATCCCGGTGCCGTCTCACCCGTGCCTCAGTCTCGTCGTC GTCTGCGTCCAGAACTTCAACAAGTGTGAGTAGTCCTCCCACAATGCCAAAAAAAAATCCAGTACGCCTCCTCAC GGTGCGCTAATTATCCTGCACACCAGGGTCGAGGCGATTAATCACGTACCGGCGCATTCCCGATAGCCAAGTGTC CCGGCCTGCCCTGGAAGCCTACCGTTCTCGCAGCAGCGCCCAAGAGACGGGAAAGACTGCAGACGATCTGAATCC GTTTCGTCGTGGTTACTTTAGGAAGTTCGAGGCAGAAGACTAG |