Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|7446
Gene name
LocationContig_939:855..2398
Strand+
Gene length (bp)1543
Transcript length (bp)1332
Coding sequence length (bp)1332
Protein length (aa) 444

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01170 UPF0020 Putative RNA methylase family UPF0020 8.8E-07 181 295

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q12463|TRM11_YEAST tRNA (guanine(10)-N2)-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRM11 PE=1 SV=1 2 396 1.0E-101
sp|O94636|TRM11_SCHPO tRNA (guanine(10)-N2)-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trm11 PE=3 SV=2 3 406 6.0E-93
sp|Q7Z4G4|TRM11_HUMAN tRNA (guanine(10)-N2)-methyltransferase homolog OS=Homo sapiens GN=TRMT11 PE=1 SV=1 3 399 6.0E-69
sp|Q6NS23|TRM11_XENLA tRNA (guanine(10)-N2)-methyltransferase homolog OS=Xenopus laevis GN=trmt11 PE=2 SV=1 2 436 2.0E-68
sp|Q5R962|TRM11_PONAB tRNA (guanine(10)-N2)-methyltransferase homolog OS=Pongo abelii GN=TRMT11 PE=2 SV=1 3 399 2.0E-68
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q12463|TRM11_YEAST tRNA (guanine(10)-N2)-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRM11 PE=1 SV=1 2 396 1.0E-101
sp|O94636|TRM11_SCHPO tRNA (guanine(10)-N2)-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trm11 PE=3 SV=2 3 406 6.0E-93
sp|Q7Z4G4|TRM11_HUMAN tRNA (guanine(10)-N2)-methyltransferase homolog OS=Homo sapiens GN=TRMT11 PE=1 SV=1 3 399 6.0E-69
sp|Q6NS23|TRM11_XENLA tRNA (guanine(10)-N2)-methyltransferase homolog OS=Xenopus laevis GN=trmt11 PE=2 SV=1 2 436 2.0E-68
sp|Q5R962|TRM11_PONAB tRNA (guanine(10)-N2)-methyltransferase homolog OS=Pongo abelii GN=TRMT11 PE=2 SV=1 3 399 2.0E-68
sp|Q7TNK6|TRM11_RAT tRNA (guanine(10)-N2)-methyltransferase homolog OS=Rattus norvegicus GN=Trmt11 PE=2 SV=1 3 401 1.0E-66
sp|Q05B63|TRM11_BOVIN tRNA (guanine(10)-N2)-methyltransferase homolog OS=Bos taurus GN=TRMT11 PE=2 SV=1 3 401 3.0E-66
sp|Q9CWH5|TRM11_MOUSE tRNA (guanine(10)-N2)-methyltransferase homolog OS=Mus musculus GN=Trmt11 PE=1 SV=1 3 401 2.0E-65
sp|Q6YJI5|TRM11_CHICK tRNA (guanine(10)-N2)-methyltransferase homolog OS=Gallus gallus GN=TRMT11 PE=2 SV=1 11 401 6.0E-63
sp|Q54QA6|TRM11_DICDI tRNA (guanine(10)-N2)-methyltransferase homolog OS=Dictyostelium discoideum GN=trmt11 PE=3 SV=1 2 399 2.0E-62
sp|O26820|TMG10_METTH tRNA (guanine(10)-N2)-dimethyltransferase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=trmG10 PE=3 SV=1 1 294 1.0E-11
sp|P05409|TMG10_METTL Probable tRNA (guanine(10)-N2)-dimethyltransferase (Fragment) OS=Methanothermococcus thermolithotrophicus GN=trmG10 PE=3 SV=1 193 294 2.0E-08
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|7446
MEFLIKFAQTHETFRLAELNALAVIEDVDLTIVESSLLSPLCLVRLPSAEAAQRLIRRSILAQSIHEFWGSGQDL
DALHESVKERSQHLWPQYLQPSFKFVFESYQGARSDVLKLSIINSFGYLPFKGPIRMSRPDHVFTIFELWPYDSP
VLGIENPDMMYLGRLVACSSRDVILRFDLKKRSYISTTSMDSELSLVTANIALAAPGKLFYDPFVGTGSFPIACA
HFGAVGWGSDIDGRVIRGTGGCKSLKGNFEQYGLTNHVGDFFAADLINTPIKETHRLWDGIVCDPPYGVREGLRV
LGIRDPTKTPWLVEKGIIQAALPDFVPPKKPYSFMAMLDDILAFASATLVDDGRLSFWMPTANDEQEIPVPSHPC
LSLVVVCVQNFNKWSRRLITYRRIPDSQVSRPALEAYRSRSSAQETGKTADDLNPFRRGYFRKFEAED*
Coding >Ophun1|7446
ATGGAGTTCCTCATAAAATTCGCCCAGACGCACGAGACGTTTCGGTTGGCCGAGCTCAACGCGTTGGCCGTCATT
GAGGACGTTGATTTGACTATCGTCGAGTCCAGCTTACTGTCACCGTTGTGCCTCGTTCGGCTCCCTTCGGCCGAG
GCAGCGCAGAGGCTCATAAGACGCTCCATCCTGGCGCAATCGATTCACGAATTCTGGGGGTCGGGCCAAGATCTG
GATGCTCTGCACGAGTCTGTCAAGGAGCGGTCGCAGCATCTCTGGCCTCAGTATTTACAACCATCTTTTAAATTC
GTCTTCGAGTCCTACCAGGGCGCGCGCTCCGATGTTCTAAAACTGTCCATCATCAACTCGTTCGGCTACCTGCCA
TTTAAGGGCCCTATTCGCATGTCTCGCCCAGACCACGTCTTCACCATCTTCGAGTTATGGCCGTACGACAGCCCT
GTTCTCGGCATCGAGAACCCGGACATGATGTACCTCGGTCGTTTAGTTGCCTGCTCATCGCGTGATGTTATCCTT
CGGTTCGATCTCAAAAAGCGAAGCTACATTTCTACCACCAGTATGGACTCTGAGCTGTCACTTGTGACGGCCAAC
ATTGCCTTGGCTGCCCCAGGAAAGCTCTTCTACGACCCCTTCGTCGGCACTGGCTCCTTCCCCATTGCCTGTGCG
CACTTCGGCGCCGTCGGATGGGGTAGCGATATTGACGGACGTGTCATCCGCGGCACCGGTGGCTGCAAGAGCCTG
AAAGGCAACTTTGAGCAGTACGGCCTCACCAACCACGTGGGCGACTTCTTCGCCGCCGATCTCATCAACACGCCC
ATCAAAGAGACTCATAGGTTATGGGATGGCATTGTGTGCGATCCACCCTACGGCGTGCGTGAAGGGCTGAGGGTG
CTCGGTATCAGAGATCCGACCAAGACGCCCTGGCTGGTGGAAAAGGGCATTATTCAGGCGGCTCTGCCGGATTTC
GTGCCCCCAAAGAAACCATACAGCTTCATGGCCATGCTCGACGACATACTCGCTTTCGCGTCGGCGACCTTGGTC
GATGACGGGAGACTGTCCTTTTGGATGCCGACGGCCAATGACGAGCAGGAGATCCCGGTGCCGTCTCACCCGTGC
CTCAGTCTCGTCGTCGTCTGCGTCCAGAACTTCAACAAGTGGTCGAGGCGATTAATCACGTACCGGCGCATTCCC
GATAGCCAAGTGTCCCGGCCTGCCCTGGAAGCCTACCGTTCTCGCAGCAGCGCCCAAGAGACGGGAAAGACTGCA
GACGATCTGAATCCGTTTCGTCGTGGTTACTTTAGGAAGTTCGAGGCAGAAGACTAG
Transcript >Ophun1|7446
ATGGAGTTCCTCATAAAATTCGCCCAGACGCACGAGACGTTTCGGTTGGCCGAGCTCAACGCGTTGGCCGTCATT
GAGGACGTTGATTTGACTATCGTCGAGTCCAGCTTACTGTCACCGTTGTGCCTCGTTCGGCTCCCTTCGGCCGAG
GCAGCGCAGAGGCTCATAAGACGCTCCATCCTGGCGCAATCGATTCACGAATTCTGGGGGTCGGGCCAAGATCTG
GATGCTCTGCACGAGTCTGTCAAGGAGCGGTCGCAGCATCTCTGGCCTCAGTATTTACAACCATCTTTTAAATTC
GTCTTCGAGTCCTACCAGGGCGCGCGCTCCGATGTTCTAAAACTGTCCATCATCAACTCGTTCGGCTACCTGCCA
TTTAAGGGCCCTATTCGCATGTCTCGCCCAGACCACGTCTTCACCATCTTCGAGTTATGGCCGTACGACAGCCCT
GTTCTCGGCATCGAGAACCCGGACATGATGTACCTCGGTCGTTTAGTTGCCTGCTCATCGCGTGATGTTATCCTT
CGGTTCGATCTCAAAAAGCGAAGCTACATTTCTACCACCAGTATGGACTCTGAGCTGTCACTTGTGACGGCCAAC
ATTGCCTTGGCTGCCCCAGGAAAGCTCTTCTACGACCCCTTCGTCGGCACTGGCTCCTTCCCCATTGCCTGTGCG
CACTTCGGCGCCGTCGGATGGGGTAGCGATATTGACGGACGTGTCATCCGCGGCACCGGTGGCTGCAAGAGCCTG
AAAGGCAACTTTGAGCAGTACGGCCTCACCAACCACGTGGGCGACTTCTTCGCCGCCGATCTCATCAACACGCCC
ATCAAAGAGACTCATAGGTTATGGGATGGCATTGTGTGCGATCCACCCTACGGCGTGCGTGAAGGGCTGAGGGTG
CTCGGTATCAGAGATCCGACCAAGACGCCCTGGCTGGTGGAAAAGGGCATTATTCAGGCGGCTCTGCCGGATTTC
GTGCCCCCAAAGAAACCATACAGCTTCATGGCCATGCTCGACGACATACTCGCTTTCGCGTCGGCGACCTTGGTC
GATGACGGGAGACTGTCCTTTTGGATGCCGACGGCCAATGACGAGCAGGAGATCCCGGTGCCGTCTCACCCGTGC
CTCAGTCTCGTCGTCGTCTGCGTCCAGAACTTCAACAAGTGGTCGAGGCGATTAATCACGTACCGGCGCATTCCC
GATAGCCAAGTGTCCCGGCCTGCCCTGGAAGCCTACCGTTCTCGCAGCAGCGCCCAAGAGACGGGAAAGACTGCA
GACGATCTGAATCCGTTTCGTCGTGGTTACTTTAGGAAGTTCGAGGCAGAAGACTAG
Gene >Ophun1|7446
ATGGAGTTCCTCATAAAATTCGCCCAGACGCACGAGACGTTTCGGTTGGCCGAGCTCAACGCGTTGGCCGTCATT
GAGGACGTTGATTTGACTATCGTCGAGTCCAGCTTACTGGTGAGCTCGATTAGTACAGTAGTTCGGCGGCCTAGA
CGCGTAATCTCACTAAGTGGAGGGCAGTCACCGTTGTGCCTCGTTCGGCTCCCTTCGGCCGAGGCAGCGCAGAGG
CTCATAAGACGCTCCATCCTGGCGCAATCGATTCACGAATTCTGGGGGTCGGGCCAAGATCTGGATGCTCTGCAC
GAGTCTGTCAAGGAGCGGTCGCAGCATCTCTGGCCTCAGTATTTACAACCATCTTTTAAATTCGTCTTCGAGTCC
TACCAGGGCGCGCGCTCCGATGTTCTAAAACTGTCCATCATCAACTCGTTCGGCTACCTGCCATTTAAGGGCCCT
ATTCGCATGTCTCGCCCAGACCACGTCTTCACCATCTTCGAGTTATGGCCGTACGACAGCCCTGTTCTCGGCATC
GAGAACCCGGACATGATGTACCTCGGTCGTTTAGTTGCCTGCTCATCGCGTGATGTTATCCTTCGGTTCGATCTC
AAAAAGCGAAGCTACATTTCTACCACCAGTATGGACTCTGAGCTGTCACTTGTGACGGCCAACATTGCCTTGGCT
GCCCCAGGAAAGCTCTTCTACGACCCCTTCGTCGGCACTGGCTCCTTCCCCATTGCCTGTGCGCACTTCGGCGCC
GTCGGATGGGGTAGCGATATTGACGGACGTGTCATCCGCGGCACCGGTGGCTGCAAGAGCCTGAAAGGCAACTTT
GAGCAGTACGGCCTCACCAACCACGTGGGCGACTTCTTCGCCGCCGATCTCATCAACACGCCCATCAAAGAGACT
CATAGGTTATGGGATGGCATTGTGTGCGATCCACCCTACGGCGTGCGTGAAGGGCTGAGGGTGCTCGGTATCAGA
GATCCGACCAAGACGCCCTGGCTGGTGGAAAAGGGCATTATTCAGGCGGCGTATGTATTCCTCTCGTTCCCACAC
GCGACGCATCGCTCTGGAGATATTGACAATGACCGTTACCTTTCCAGTCTGCCGGATTTCGTGCCCCCAAAGAAA
CCATACAGCTTCATGGCCATGCTCGACGACATACTCGCTTTCGCGTCGGCGACCTTGGTCGATGACGGGAGACTG
TCCTTTTGGATGCCGACGGCCAATGACGAGCAGGAGATCCCGGTGCCGTCTCACCCGTGCCTCAGTCTCGTCGTC
GTCTGCGTCCAGAACTTCAACAAGTGTGAGTAGTCCTCCCACAATGCCAAAAAAAAATCCAGTACGCCTCCTCAC
GGTGCGCTAATTATCCTGCACACCAGGGTCGAGGCGATTAATCACGTACCGGCGCATTCCCGATAGCCAAGTGTC
CCGGCCTGCCCTGGAAGCCTACCGTTCTCGCAGCAGCGCCCAAGAGACGGGAAAGACTGCAGACGATCTGAATCC
GTTTCGTCGTGGTTACTTTAGGAAGTTCGAGGCAGAAGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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