Protein ID | Ophun1|7432 |
Gene name | |
Location | Contig_931:238..1722 |
Strand | - |
Gene length (bp) | 1484 |
Transcript length (bp) | 1437 |
Coding sequence length (bp) | 1437 |
Protein length (aa) | 479 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13391 | HNH_2 | HNH endonuclease | 2.4E-09 | 221 | 310 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 29 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|7432 MESDMESLHDAADIGNPALEEFLTLAESYFMEYQNEDELSYGRAYLTARPDFSRPTTVPLSEEVDERLEIARTFE DFLSVHVPTPLLNFQLALILSAPLPVLRRELETARTQRDTPPKDVLSFILRMNGFSLYLRQFTQCFFHGPNTITQ TPMSTHRTSPASNPVTPPRTSLSEETPMSPGAYHELRASKKEEDIRKCEIANVGRSTKAANDCKSRDEYKCIITG TDNPEACHILPHAWTRSLRNRIIVQERLPFALQFLCDINGQEAADIQSMFFPDKTTLCALDAPWNMISLSPSLHY WWGRAAFGLKYLGHFPAGSKNLNATDVVLEFHRFTLSQMSKQDLDNAAAIDNGAKDLPTTLVGQLLRSPKPKMDA NFFDSNRCVQSGHQFTITIEPSTDAPKFIAAIKIQWATIQLGSMTGAAGPQDPNNRNDEDDDYYVATSGMGRIPE GNVFMSDPWDLGGGANQSERACDVMSDE* |
Coding | >Ophun1|7432 ATGGAATCCGACATGGAGTCTCTTCACGATGCCGCAGATATTGGAAATCCCGCCCTAGAAGAGTTCTTAACGCTA GCCGAGAGCTATTTCATGGAATATCAGAACGAAGACGAGCTATCATATGGCAGGGCCTATCTCACCGCCAGGCCT GATTTCAGCCGTCCGACCACAGTCCCGCTAAGCGAAGAGGTGGACGAGAGACTAGAGATCGCCAGAACTTTCGAG GATTTTTTAAGTGTGCATGTGCCGACGCCATTACTCAATTTTCAGCTGGCATTGATTCTGTCGGCACCTCTGCCA GTTTTGAGACGCGAACTTGAGACGGCACGGACACAGCGAGACACCCCACCAAAAGATGTGCTTTCATTTATCTTG CGTATGAACGGGTTTTCCCTGTACCTACGCCAATTCACCCAATGCTTTTTCCACGGCCCGAATACCATCACTCAA ACTCCCATGTCGACCCACCGTACATCCCCGGCTTCCAATCCTGTCACTCCGCCTCGGACTTCCTTGTCCGAGGAA ACCCCAATGTCGCCCGGTGCTTACCACGAGTTGAGGGCGTCGAAGAAAGAGGAAGACATTCGAAAATGCGAAATC GCGAACGTTGGCCGGAGTACTAAAGCTGCAAACGATTGCAAAAGTCGCGATGAATATAAGTGCATAATCACTGGG ACCGACAATCCTGAGGCGTGCCACATCCTCCCCCATGCGTGGACAAGATCGTTAAGAAACCGCATCATTGTTCAA GAGCGATTGCCTTTCGCGCTCCAGTTCCTGTGTGATATCAATGGTCAGGAAGCTGCAGACATTCAGAGCATGTTC TTCCCGGATAAGACTACTTTGTGCGCACTTGACGCTCCATGGAACATGATATCGCTCAGTCCCTCCTTACACTAC TGGTGGGGCAGAGCAGCCTTCGGGCTGAAATACCTTGGACATTTTCCGGCCGGGTCGAAGAATCTCAATGCCACC GACGTTGTTCTTGAATTCCACCGGTTCACCCTCTCTCAAATGTCGAAGCAGGATCTGGACAACGCCGCCGCAATT GATAACGGTGCTAAGGATCTACCGACGACGCTCGTTGGACAACTTCTCAGGTCTCCAAAGCCTAAGATGGACGCC AATTTCTTTGATTCAAACCGCTGCGTACAATCTGGTCATCAGTTTACGATCACTATCGAGCCTAGTACGGATGCA CCGAAGTTTATTGCGGCTATTAAGATCCAGTGGGCTACTATCCAGTTAGGGTCGATGACAGGCGCGGCCGGTCCT CAAGACCCGAACAACAGAAACGATGAAGACGACGACTACTACGTTGCGACTAGTGGGATGGGACGGATTCCCGAG GGAAATGTCTTCATGTCTGATCCCTGGGATCTAGGTGGGGGGGCAAATCAGTCGGAAAGGGCATGTGACGTTATG TCAGATGAATAG |
Transcript | >Ophun1|7432 ATGGAATCCGACATGGAGTCTCTTCACGATGCCGCAGATATTGGAAATCCCGCCCTAGAAGAGTTCTTAACGCTA GCCGAGAGCTATTTCATGGAATATCAGAACGAAGACGAGCTATCATATGGCAGGGCCTATCTCACCGCCAGGCCT GATTTCAGCCGTCCGACCACAGTCCCGCTAAGCGAAGAGGTGGACGAGAGACTAGAGATCGCCAGAACTTTCGAG GATTTTTTAAGTGTGCATGTGCCGACGCCATTACTCAATTTTCAGCTGGCATTGATTCTGTCGGCACCTCTGCCA GTTTTGAGACGCGAACTTGAGACGGCACGGACACAGCGAGACACCCCACCAAAAGATGTGCTTTCATTTATCTTG CGTATGAACGGGTTTTCCCTGTACCTACGCCAATTCACCCAATGCTTTTTCCACGGCCCGAATACCATCACTCAA ACTCCCATGTCGACCCACCGTACATCCCCGGCTTCCAATCCTGTCACTCCGCCTCGGACTTCCTTGTCCGAGGAA ACCCCAATGTCGCCCGGTGCTTACCACGAGTTGAGGGCGTCGAAGAAAGAGGAAGACATTCGAAAATGCGAAATC GCGAACGTTGGCCGGAGTACTAAAGCTGCAAACGATTGCAAAAGTCGCGATGAATATAAGTGCATAATCACTGGG ACCGACAATCCTGAGGCGTGCCACATCCTCCCCCATGCGTGGACAAGATCGTTAAGAAACCGCATCATTGTTCAA GAGCGATTGCCTTTCGCGCTCCAGTTCCTGTGTGATATCAATGGTCAGGAAGCTGCAGACATTCAGAGCATGTTC TTCCCGGATAAGACTACTTTGTGCGCACTTGACGCTCCATGGAACATGATATCGCTCAGTCCCTCCTTACACTAC TGGTGGGGCAGAGCAGCCTTCGGGCTGAAATACCTTGGACATTTTCCGGCCGGGTCGAAGAATCTCAATGCCACC GACGTTGTTCTTGAATTCCACCGGTTCACCCTCTCTCAAATGTCGAAGCAGGATCTGGACAACGCCGCCGCAATT GATAACGGTGCTAAGGATCTACCGACGACGCTCGTTGGACAACTTCTCAGGTCTCCAAAGCCTAAGATGGACGCC AATTTCTTTGATTCAAACCGCTGCGTACAATCTGGTCATCAGTTTACGATCACTATCGAGCCTAGTACGGATGCA CCGAAGTTTATTGCGGCTATTAAGATCCAGTGGGCTACTATCCAGTTAGGGTCGATGACAGGCGCGGCCGGTCCT CAAGACCCGAACAACAGAAACGATGAAGACGACGACTACTACGTTGCGACTAGTGGGATGGGACGGATTCCCGAG GGAAATGTCTTCATGTCTGATCCCTGGGATCTAGGTGGGGGGGCAAATCAGTCGGAAAGGGCATGTGACGTTATG TCAGATGAATAG |
Gene | >Ophun1|7432 ATGGAATCCGACATGGAGTCTCTTCACGATGCCGCAGATATTGGAAATCCCGCCCTAGAAGAGTTCTTAACGCTA GCCGAGAGCTATTTCATGGAATATCAGAACGAAGACGAGCTATCATATGGCAGGGCCTATCTCACCGCCAGGCCT GATTTCAGCCGTCCGACCACAGTCCCGCTAAGCGAAGAGGTGGACGAGAGACTAGAGATCGCCAGAACTTTCGAG GATTTTTTAAGTGTGCATGTGCCGACGCCATTACTCAATTTTCAGCTGGCATTGATTCTGTCGGCACCTCTGCCA GTTTTGAGACGCGAACTTGAGACGGCACGGACACAGCGAGACACCCCACCAAAAGATGTGCTTTCATTTATCTTG CGTATGAACGGGTTTTCCCTGTACCTACGCCAATTCACCCAATGCTGTGAGCTATCTGTTATTCTTTACTTCATC ATTGCTAACGAAATTCAGTTTTCCACGGCCCGAATACCATCACTCAAACTCCCATGTCGACCCACCGTACATCCC CGGCTTCCAATCCTGTCACTCCGCCTCGGACTTCCTTGTCCGAGGAAACCCCAATGTCGCCCGGTGCTTACCACG AGTTGAGGGCGTCGAAGAAAGAGGAAGACATTCGAAAATGCGAAATCGCGAACGTTGGCCGGAGTACTAAAGCTG CAAACGATTGCAAAAGTCGCGATGAATATAAGTGCATAATCACTGGGACCGACAATCCTGAGGCGTGCCACATCC TCCCCCATGCGTGGACAAGATCGTTAAGAAACCGCATCATTGTTCAAGAGCGATTGCCTTTCGCGCTCCAGTTCC TGTGTGATATCAATGGTCAGGAAGCTGCAGACATTCAGAGCATGTTCTTCCCGGATAAGACTACTTTGTGCGCAC TTGACGCTCCATGGAACATGATATCGCTCAGTCCCTCCTTACACTACTGGTGGGGCAGAGCAGCCTTCGGGCTGA AATACCTTGGACATTTTCCGGCCGGGTCGAAGAATCTCAATGCCACCGACGTTGTTCTTGAATTCCACCGGTTCA CCCTCTCTCAAATGTCGAAGCAGGATCTGGACAACGCCGCCGCAATTGATAACGGTGCTAAGGATCTACCGACGA CGCTCGTTGGACAACTTCTCAGGTCTCCAAAGCCTAAGATGGACGCCAATTTCTTTGATTCAAACCGCTGCGTAC AATCTGGTCATCAGTTTACGATCACTATCGAGCCTAGTACGGATGCACCGAAGTTTATTGCGGCTATTAAGATCC AGTGGGCTACTATCCAGTTAGGGTCGATGACAGGCGCGGCCGGTCCTCAAGACCCGAACAACAGAAACGATGAAG ACGACGACTACTACGTTGCGACTAGTGGGATGGGACGGATTCCCGAGGGAAATGTCTTCATGTCTGATCCCTGGG ATCTAGGTGGGGGGGCAAATCAGTCGGAAAGGGCATGTGACGTTATGTCAGATGAATAG |