Protein ID | Ophun1|7415 |
Gene name | |
Location | Contig_93:736..2059 |
Strand | - |
Gene length (bp) | 1323 |
Transcript length (bp) | 1323 |
Coding sequence length (bp) | 1323 |
Protein length (aa) | 441 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11790 | Glyco_hydro_cc | Glycosyl hydrolase catalytic core | 1.6E-52 | 201 | 434 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q09788|ASL1_SCHPO | Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=asl1 PE=1 SV=1 | 198 | 434 | 2.0E-15 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.99971 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH128 | 3.1E-56 | 221 | 434 |
Orthofinder run ID | 4 |
Orthogroup | 3102 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|7415 MFTSKMIVLAALASLAGQAVAFNSHRHLHRRMVGGHKAGATHWVTVYETQYTTVYDQEPTGASKPEANAVYAPEP AKPTPKPAEKPVHYKSEAPAKPPAPAYKPAPPPAPQAPAPARPAPARPAPAPPAPVEPKAPAVGPSRSEEPPKTT LEVLPKPVASLLQPAAPYVPPVAPVIPSIGPSSPSGPSHGSSGSPFSGKRGLAYNEAGLANKFNGQCNDCAPWAY NWGSSPQGLSPDTSYVPMMWGNKPAAVSNWHSDAQKALSNGCKAMLSINEPDNAGQANMSPQDAAEFHVRYMNPY GGKALIGSPAVTNSGQGGQGIEWLSAFIKACDALPDKCVVDFCVVHWYSPPEYSDTLFDHIKKAHDVCGGKPVWL TEFGPVDAGGQPMNSPDFFKSVVPKLDAIEYLHAYAPFMCSSGKLMSSPNEISLMGKAYAGIPLL* |
Coding | >Ophun1|7415 ATGTTCACCAGCAAGATGATCGTCCTCGCCGCCCTCGCCTCTCTGGCTGGGCAGGCCGTCGCCTTCAACTCCCAC CGCCATCTTCATCGCCGCATGGTTGGCGGGCACAAGGCCGGCGCCACTCACTGGGTCACCGTCTATGAGACTCAG TACACGACCGTCTACGATCAAGAGCCCACCGGAGCCTCCAAGCCGGAAGCCAACGCCGTTTACGCCCCCGAACCC GCCAAGCCGACCCCAAAGCCGGCCGAGAAGCCGGTGCACTACAAGTCGGAGGCTCCCGCCAAGCCGCCCGCTCCC GCCTACAAGCCCGCTCCCCCTCCGGCTCCACAGGCTCCGGCCCCTGCTCGCCCTGCCCCTGCTCGCCCTGCTCCG GCTCCCCCTGCCCCGGTCGAGCCCAAGGCTCCGGCCGTGGGGCCTTCTCGGTCTGAGGAACCGCCCAAGACGACG CTCGAGGTTCTGCCCAAGCCAGTTGCTTCGCTCCTGCAGCCCGCGGCCCCTTATGTGCCGCCTGTGGCGCCTGTC ATTCCCTCGATTGGTCCCTCGAGCCCGTCTGGTCCCAGCCACGGCAGCTCTGGGTCGCCCTTCTCCGGGAAGCGC GGTCTGGCCTACAACGAAGCGGGCCTCGCCAACAAGTTCAACGGCCAGTGCAACGACTGCGCTCCGTGGGCCTAC AACTGGGGGTCTTCGCCTCAGGGACTCTCGCCCGATACCAGCTACGTGCCCATGATGTGGGGGAACAAGCCGGCC GCCGTCAGCAACTGGCACTCGGACGCGCAAAAGGCCCTCTCCAACGGCTGCAAGGCCATGCTCAGCATCAACGAG CCCGACAACGCCGGCCAGGCCAACATGAGCCCGCAGGATGCGGCCGAGTTCCACGTGCGATACATGAACCCCTAC GGCGGCAAGGCACTCATCGGCTCGCCGGCCGTGACCAACAGCGGCCAGGGCGGCCAGGGCATCGAGTGGCTCAGC GCCTTCATCAAGGCTTGCGATGCCCTGCCGGACAAGTGCGTCGTCGACTTTTGCGTCGTCCACTGGTACTCGCCG CCCGAGTACTCGGACACGCTGTTCGATCACATCAAAAAGGCCCACGATGTGTGCGGCGGGAAGCCCGTCTGGCTG ACCGAGTTCGGCCCCGTCGACGCCGGCGGTCAGCCCATGAACTCGCCCGACTTCTTCAAGTCGGTGGTGCCCAAG CTCGACGCCATCGAATACCTGCACGCCTACGCGCCTTTCATGTGCTCGAGCGGCAAGCTCATGTCGTCGCCCAAC GAGATCAGCCTCATGGGAAAGGCCTACGCTGGTATCCCTCTTCTGTAG |
Transcript | >Ophun1|7415 ATGTTCACCAGCAAGATGATCGTCCTCGCCGCCCTCGCCTCTCTGGCTGGGCAGGCCGTCGCCTTCAACTCCCAC CGCCATCTTCATCGCCGCATGGTTGGCGGGCACAAGGCCGGCGCCACTCACTGGGTCACCGTCTATGAGACTCAG TACACGACCGTCTACGATCAAGAGCCCACCGGAGCCTCCAAGCCGGAAGCCAACGCCGTTTACGCCCCCGAACCC GCCAAGCCGACCCCAAAGCCGGCCGAGAAGCCGGTGCACTACAAGTCGGAGGCTCCCGCCAAGCCGCCCGCTCCC GCCTACAAGCCCGCTCCCCCTCCGGCTCCACAGGCTCCGGCCCCTGCTCGCCCTGCCCCTGCTCGCCCTGCTCCG GCTCCCCCTGCCCCGGTCGAGCCCAAGGCTCCGGCCGTGGGGCCTTCTCGGTCTGAGGAACCGCCCAAGACGACG CTCGAGGTTCTGCCCAAGCCAGTTGCTTCGCTCCTGCAGCCCGCGGCCCCTTATGTGCCGCCTGTGGCGCCTGTC ATTCCCTCGATTGGTCCCTCGAGCCCGTCTGGTCCCAGCCACGGCAGCTCTGGGTCGCCCTTCTCCGGGAAGCGC GGTCTGGCCTACAACGAAGCGGGCCTCGCCAACAAGTTCAACGGCCAGTGCAACGACTGCGCTCCGTGGGCCTAC AACTGGGGGTCTTCGCCTCAGGGACTCTCGCCCGATACCAGCTACGTGCCCATGATGTGGGGGAACAAGCCGGCC GCCGTCAGCAACTGGCACTCGGACGCGCAAAAGGCCCTCTCCAACGGCTGCAAGGCCATGCTCAGCATCAACGAG CCCGACAACGCCGGCCAGGCCAACATGAGCCCGCAGGATGCGGCCGAGTTCCACGTGCGATACATGAACCCCTAC GGCGGCAAGGCACTCATCGGCTCGCCGGCCGTGACCAACAGCGGCCAGGGCGGCCAGGGCATCGAGTGGCTCAGC GCCTTCATCAAGGCTTGCGATGCCCTGCCGGACAAGTGCGTCGTCGACTTTTGCGTCGTCCACTGGTACTCGCCG CCCGAGTACTCGGACACGCTGTTCGATCACATCAAAAAGGCCCACGATGTGTGCGGCGGGAAGCCCGTCTGGCTG ACCGAGTTCGGCCCCGTCGACGCCGGCGGTCAGCCCATGAACTCGCCCGACTTCTTCAAGTCGGTGGTGCCCAAG CTCGACGCCATCGAATACCTGCACGCCTACGCGCCTTTCATGTGCTCGAGCGGCAAGCTCATGTCGTCGCCCAAC GAGATCAGCCTCATGGGAAAGGCCTACGCTGGTATCCCTCTTCTGTAG |
Gene | >Ophun1|7415 ATGTTCACCAGCAAGATGATCGTCCTCGCCGCCCTCGCCTCTCTGGCTGGGCAGGCCGTCGCCTTCAACTCCCAC CGCCATCTTCATCGCCGCATGGTTGGCGGGCACAAGGCCGGCGCCACTCACTGGGTCACCGTCTATGAGACTCAG TACACGACCGTCTACGATCAAGAGCCCACCGGAGCCTCCAAGCCGGAAGCCAACGCCGTTTACGCCCCCGAACCC GCCAAGCCGACCCCAAAGCCGGCCGAGAAGCCGGTGCACTACAAGTCGGAGGCTCCCGCCAAGCCGCCCGCTCCC GCCTACAAGCCCGCTCCCCCTCCGGCTCCACAGGCTCCGGCCCCTGCTCGCCCTGCCCCTGCTCGCCCTGCTCCG GCTCCCCCTGCCCCGGTCGAGCCCAAGGCTCCGGCCGTGGGGCCTTCTCGGTCTGAGGAACCGCCCAAGACGACG CTCGAGGTTCTGCCCAAGCCAGTTGCTTCGCTCCTGCAGCCCGCGGCCCCTTATGTGCCGCCTGTGGCGCCTGTC ATTCCCTCGATTGGTCCCTCGAGCCCGTCTGGTCCCAGCCACGGCAGCTCTGGGTCGCCCTTCTCCGGGAAGCGC GGTCTGGCCTACAACGAAGCGGGCCTCGCCAACAAGTTCAACGGCCAGTGCAACGACTGCGCTCCGTGGGCCTAC AACTGGGGGTCTTCGCCTCAGGGACTCTCGCCCGATACCAGCTACGTGCCCATGATGTGGGGGAACAAGCCGGCC GCCGTCAGCAACTGGCACTCGGACGCGCAAAAGGCCCTCTCCAACGGCTGCAAGGCCATGCTCAGCATCAACGAG CCCGACAACGCCGGCCAGGCCAACATGAGCCCGCAGGATGCGGCCGAGTTCCACGTGCGATACATGAACCCCTAC GGCGGCAAGGCACTCATCGGCTCGCCGGCCGTGACCAACAGCGGCCAGGGCGGCCAGGGCATCGAGTGGCTCAGC GCCTTCATCAAGGCTTGCGATGCCCTGCCGGACAAGTGCGTCGTCGACTTTTGCGTCGTCCACTGGTACTCGCCG CCCGAGTACTCGGACACGCTGTTCGATCACATCAAAAAGGCCCACGATGTGTGCGGCGGGAAGCCCGTCTGGCTG ACCGAGTTCGGCCCCGTCGACGCCGGCGGTCAGCCCATGAACTCGCCCGACTTCTTCAAGTCGGTGGTGCCCAAG CTCGACGCCATCGAATACCTGCACGCCTACGCGCCTTTCATGTGCTCGAGCGGCAAGCTCATGTCGTCGCCCAAC GAGATCAGCCTCATGGGAAAGGCCTACGCTGGTATCCCTCTTCTGTAG |