Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|7234
Gene name
LocationContig_880:4000..5353
Strand-
Gene length (bp)1353
Transcript length (bp)1185
Coding sequence length (bp)1185
Protein length (aa) 395

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 10 30 20
2 43 65 22
3 88 110 22
4 122 144 22
5 172 194 22
6 206 228 22
7 248 270 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|7234
MAAVSGMRLFSVQLTLLIICLLITGLRTYVKGCMARRMASEDWVILLAMTTFAISISIAMRGATFGAFGRVRSTA
ASPQSTVASYEGIYFCELLYAPTTLAVRISICLFLLKIVRHKAHKRFIYGLLVIVSAAAAAYWLITLLQCFPLSF
FWDHARPESKGRCIDPELLLLAGYIYGSISALSDVVVGTLPILILWQTRLHVRTKLAVIGLLGMSIFASIAVIIR
MTTLSSIATQSQQFFRLTMNTALWSIIEPAVGIVAASLPTLRPLVKKLKLRSRVSRPSTPRIILTGHRSRPLHLV
PHWLELKTRNMSDEARAELGLAPQIPASIMAREWTSCNVAVEQSRVLETPVPGAITVHTAIEVTTRARRSSDASQ
CQSTGWRRSQIPEGHLAVL*
Coding >Ophun1|7234
ATGGCTGCCGTCTCTGGCATGCGGCTCTTCAGCGTCCAGCTCACCCTCTTGATCATATGTCTACTGATTACGGGC
TTGAGAACATATGTCAAGGGTTGTATGGCTCGCAGAATGGCTTCCGAAGACTGGGTCATCCTCCTGGCCATGACC
ACCTTCGCCATCTCCATCTCCATCGCCATGAGAGGTGCCACATTCGGCGCCTTTGGACGGGTCAGAAGCACCGCC
GCGTCTCCTCAGAGTACAGTGGCGTCTTATGAGGGCATCTACTTCTGCGAGCTGCTCTACGCACCCACGACGCTC
GCCGTCAGAATCTCTATCTGTCTATTTCTTCTCAAAATTGTCCGACACAAGGCGCACAAGAGATTCATCTACGGG
CTGCTGGTCATCGTCTCTGCCGCCGCCGCAGCCTACTGGCTCATCACCCTCCTCCAGTGCTTTCCCCTCTCGTTC
TTCTGGGATCACGCGAGGCCAGAATCCAAGGGGCGTTGCATCGACCCGGAGCTTCTCCTTCTGGCTGGATACATC
TACGGCTCCATCTCTGCCTTGTCAGACGTCGTCGTCGGGACGCTGCCCATTCTCATCCTGTGGCAGACGCGCCTC
CACGTTCGGACCAAACTCGCCGTCATTGGCCTTTTGGGGATGAGCATATTTGCCAGTATTGCCGTCATCATCCGC
ATGACGACGCTTTCCTCCATCGCCACGCAGTCCCAGCAATTCTTCCGCTTGACCATGAACACAGCCCTCTGGTCC
ATCATCGAGCCCGCCGTCGGCATCGTGGCCGCTTCTCTGCCGACTTTGCGCCCTCTTGTCAAGAAGCTCAAGCTC
CGAAGCCGCGTCAGCAGACCATCCACCCCAAGAATCATCCTCACTGGCCATCGCTCCCGACCTCTGCACCTGGTG
CCGCATTGGCTGGAGTTGAAGACGCGGAACATGTCTGACGAGGCTCGCGCAGAGCTCGGCTTAGCTCCCCAGATA
CCCGCGTCAATCATGGCCAGGGAGTGGACTTCGTGCAACGTCGCCGTCGAGCAAAGCCGAGTTCTCGAAACGCCG
GTCCCGGGAGCCATAACAGTTCACACTGCCATCGAGGTCACGACCCGAGCGCGACGCTCTTCGGACGCCAGTCAA
TGCCAATCGACGGGGTGGCGACGCAGTCAAATCCCGGAGGGGCATCTCGCGGTCCTTTGA
Transcript >Ophun1|7234
ATGGCTGCCGTCTCTGGCATGCGGCTCTTCAGCGTCCAGCTCACCCTCTTGATCATATGTCTACTGATTACGGGC
TTGAGAACATATGTCAAGGGTTGTATGGCTCGCAGAATGGCTTCCGAAGACTGGGTCATCCTCCTGGCCATGACC
ACCTTCGCCATCTCCATCTCCATCGCCATGAGAGGTGCCACATTCGGCGCCTTTGGACGGGTCAGAAGCACCGCC
GCGTCTCCTCAGAGTACAGTGGCGTCTTATGAGGGCATCTACTTCTGCGAGCTGCTCTACGCACCCACGACGCTC
GCCGTCAGAATCTCTATCTGTCTATTTCTTCTCAAAATTGTCCGACACAAGGCGCACAAGAGATTCATCTACGGG
CTGCTGGTCATCGTCTCTGCCGCCGCCGCAGCCTACTGGCTCATCACCCTCCTCCAGTGCTTTCCCCTCTCGTTC
TTCTGGGATCACGCGAGGCCAGAATCCAAGGGGCGTTGCATCGACCCGGAGCTTCTCCTTCTGGCTGGATACATC
TACGGCTCCATCTCTGCCTTGTCAGACGTCGTCGTCGGGACGCTGCCCATTCTCATCCTGTGGCAGACGCGCCTC
CACGTTCGGACCAAACTCGCCGTCATTGGCCTTTTGGGGATGAGCATATTTGCCAGTATTGCCGTCATCATCCGC
ATGACGACGCTTTCCTCCATCGCCACGCAGTCCCAGCAATTCTTCCGCTTGACCATGAACACAGCCCTCTGGTCC
ATCATCGAGCCCGCCGTCGGCATCGTGGCCGCTTCTCTGCCGACTTTGCGCCCTCTTGTCAAGAAGCTCAAGCTC
CGAAGCCGCGTCAGCAGACCATCCACCCCAAGAATCATCCTCACTGGCCATCGCTCCCGACCTCTGCACCTGGTG
CCGCATTGGCTGGAGTTGAAGACGCGGAACATGTCTGACGAGGCTCGCGCAGAGCTCGGCTTAGCTCCCCAGATA
CCCGCGTCAATCATGGCCAGGGAGTGGACTTCGTGCAACGTCGCCGTCGAGCAAAGCCGAGTTCTCGAAACGCCG
GTCCCGGGAGCCATAACAGTTCACACTGCCATCGAGGTCACGACCCGAGCGCGACGCTCTTCGGACGCCAGTCAA
TGCCAATCGACGGGGTGGCGACGCAGTCAAATCCCGGAGGGGCATCTCGCGGTCCTTTGA
Gene >Ophun1|7234
ATGGCTGCCGTCTCTGGCATGCGGCTCTTCAGCGTCCAGCTCACCCTCTTGATCATATGTCTACTGATTACGGGC
TTGAGAACATATGTCAAGGGTTGTATGGCTCGCAGAATGGCTTCCGAAGACTGGGTCATCCTCCTGGCCATGGTA
TGAAAATTCTGCATCTTACGTTTTGTGGCTCGAGACTCAAGACCTTCCTCGCAGACCACCTTCGCCATCTCCATC
TCCATCGCCATGAGAGGTGCCACATTCGGCGCCTTTGGACGGGTCAGAAGCACCGCCGCGTCTCCTCAGAGTACA
GTGGCGTCTTATGAGGGCATCTACTTCTGCGAGCTGCTCTACGCACCCACGACGCTCGCCGTCAGAATCTCTATC
TGTCTATTTCTTCTCAAAATTGTCCGACACAAGGCGCACAAGAGATTCATCTACGGGCTGCTGGTCATCGTCTCT
GCCGCCGCCGCAGCCTACTGGCTCATCACCCTCCTCCAGTGCTTTCCCCTCTCGTTCTTCTGGGATCACGCGAGG
CCAGAATCCAAGGGGCGTTGCATCGACCCGGAGCTTCTCCTTCTGGCTGGATACATCTACGGCTCCATCTCTGCC
TTGTCAGACGTCGTCGTCGGGACGCTGCCCATTCTCATCCTGTGGCAGACGCGCCTCCACGTTCGGACCAAACTC
GCCGTCATTGGCCTTTTGGGGATGAGCATATTGTGAGACCATCAAGCTGTTTCTCAACGACTACTAACGCACATC
AGTGCCAGTATTGCCGTCATCATCCGCATGACGACGCTTTCCTCCATCGCCACGCAGTCCCAGCAATTCTTCCGC
TTGACCATGTAACCCAAAGCTGAAGACTTCTTCGAATCGCTCGCCACGACCTTGACTAATTCTCATCACGTCAGG
AACACAGCCCTCTGGTCCATCATCGAGCCCGCCGTCGGCATCGTGGCCGCTTCTCTGCCGACTTTGCGCCCTCTT
GTCAAGAAGCTCAAGCTCCGAAGCCGCGTCAGCAGACCATCCACCCCAAGAATCATCCTCACTGGCCATCGCTCC
CGACCTCTGCACCTGGTGCCGCATTGGCTGGAGTTGAAGACGCGGAACATGTCTGACGAGGCTCGCGCAGAGCTC
GGCTTAGCTCCCCAGATACCCGCGTCAATCATGGCCAGGGAGTGGACTTCGTGCAACGTCGCCGTCGAGCAAAGC
CGAGTTCTCGAAACGCCGGTCCCGGGAGCCATAACAGTTCACACTGCCATCGAGGTCACGACCCGAGCGCGACGC
TCTTCGGACGCCAGTCAATGCCAATCGACGGGGTGGCGACGCAGTCAAATCCCGGAGGGGCATCTCGCGGTCCTT
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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