Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|7233
Gene name
LocationContig_880:3274..3663
Strand+
Gene length (bp)389
Transcript length (bp)264
Coding sequence length (bp)264
Protein length (aa) 88

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P0C5R9|YP17B_YEAST Uncharacterized protein YPR170W-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR170W-B PE=3 SV=1 1 87 5.0E-23
sp|P0C5R7|YP169_YEAST Putative uncharacterized protein YPR169W-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR169W-A PE=5 SV=1 1 60 1.0E-12

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 53 75 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|7233
MKPLVSALNAWSCAVISVFAIVILSILGGLYRSGHEEFVGGRDDPKDGKAVAGTIFTAVFVYVGFLVFCGFQGLL
HIRENRRGSIAL*
Coding >Ophun1|7233
ATGAAGCCACTCGTCAGCGCTCTGAACGCTTGGTCGTGCGCCGTCATATCCGTCTTCGCAATCGTCATACTCAGT
ATACTCGGAGGTCTCTATCGCTCCGGCCATGAGGAGTTTGTGGGCGGTCGCGACGACCCCAAGGACGGCAAGGCT
GTTGCGGGGACCATATTCACCGCCGTCTTTGTCTACGTTGGCTTTTTAGTCTTCTGCGGCTTTCAAGGTCTGCTG
CACATCCGAGAGAACCGGAGAGGCTCCATCGCTTTGTGA
Transcript >Ophun1|7233
ATGAAGCCACTCGTCAGCGCTCTGAACGCTTGGTCGTGCGCCGTCATATCCGTCTTCGCAATCGTCATACTCAGT
ATACTCGGAGGTCTCTATCGCTCCGGCCATGAGGAGTTTGTGGGCGGTCGCGACGACCCCAAGGACGGCAAGGCT
GTTGCGGGGACCATATTCACCGCCGTCTTTGTCTACGTTGGCTTTTTAGTCTTCTGCGGCTTTCAAGGTCTGCTG
CACATCCGAGAGAACCGGAGAGGCTCCATCGCTTTGTGA
Gene >Ophun1|7233
ATGAAGCCACTCGTCAGCGCTCTGAACGCTTGGTCGTGGTACGTCAGCCTCGGACTGGACCGGACAACAATCCGC
AGCACCGGGCTCGAAGACTGACTGAGCGGGGAATAACAGCGCCGTCATATCCGTCTTCGCAATCGTCATACTCAG
TATACTCGGAGGTCTCTATCGCTCCGGCCATGAGGAGTTTGTGGGCGGTCGCGACGACCCCAAGGACGGCAAGGC
TGTTGCGGGGACCATATTCACCGCCGTCTTTGTCTACGTTGTACGTTGGACGACGTTCTTAACATCTTCTCTGCT
GACTCAAATTGCAGGGCTTTTTAGTCTTCTGCGGCTTTCAAGGTCTGCTGCACATCCGAGAGAACCGGAGAGGCT
CCATCGCTTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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