Protein ID | Ophun1|7227 |
Gene name | |
Location | Contig_88:26293..28314 |
Strand | + |
Gene length (bp) | 2021 |
Transcript length (bp) | 1656 |
Coding sequence length (bp) | 1656 |
Protein length (aa) | 552 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14737 | DUF4470 | Domain of unknown function (DUF4470) | 3.8E-18 | 89 | 166 |
PF01753 | zf-MYND | MYND finger | 1.5E-10 | 20 | 54 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|7227 MAEPALSSPRCAHWTAKGFSCNKPATKICANCKLVVYCGADCQREHWPEHKKQCKSDMAKLSWRPAWDRQHRKPA WTFEDAAESCRGSFGASGDLRHVVKTLAHLPNTIDQKVQFVINDRDSDVVARNAILLLLAFDAARSPGEDEAATV SATVEAIMHLWYSAFIPQRVLTRLQQSVGPLINEMCHSIATEPADNIFRKSWQASDGACLSLTLQQKTWFRLRRF LNVPARMTKEKATRIRNAVAWAPERADYRDRWHYKEATPFGRLARERFRRDGLLLPFGHPRLGFDIPNPMLFQFS SWILNDKADPRDGWAISEVQRCSWPASEDWYGRLTAHLTALLEKFIARLGKNNVSFQLYNTDARVLPYYLEDRKF DRIEVSNICDAGYIGLSHTLCVYANYLQHPEENPHATLIGTFVNGVKEVSMLEDTGGQIPNIEFLTRMLPPPSIL SLTFWDSADITRLWDARYMARDVDALFKKYVELCRFDSIAAENGLEMKADNTIVDKWPTRLKAQSEDAVNVEEFR LFLAAGFNNLERCVEWKRRAEVVSES* |
Coding | >Ophun1|7227 ATGGCCGAACCGGCCCTCTCCTCACCTCGTTGCGCCCACTGGACAGCAAAAGGCTTCTCCTGCAACAAGCCCGCC ACAAAGATATGCGCCAACTGCAAACTCGTCGTTTACTGCGGAGCGGACTGCCAGAGAGAACACTGGCCCGAGCAC AAGAAACAATGCAAGTCGGACATGGCGAAGCTCTCTTGGCGTCCGGCCTGGGACCGCCAACATCGCAAACCGGCC TGGACTTTCGAAGACGCTGCAGAGAGCTGCCGCGGCTCCTTTGGCGCTTCGGGAGACTTGCGTCATGTCGTCAAG ACGCTCGCCCATCTCCCAAACACCATCGACCAGAAAGTCCAGTTCGTCATCAACGACAGAGACTCGGATGTCGTA GCAAGAAACGCCATCCTGCTACTCCTTGCTTTCGATGCAGCCCGTTCGCCTGGTGAAGACGAGGCCGCAACCGTC TCCGCCACCGTCGAAGCAATCATGCACCTCTGGTACTCTGCCTTTATCCCGCAGAGGGTCCTTACGCGCCTGCAG CAGAGCGTTGGGCCCTTGATCAACGAGATGTGCCACAGCATCGCGACGGAGCCTGCCGACAACATCTTTCGCAAG TCCTGGCAGGCTTCGGATGGCGCATGCCTGAGCCTGACCCTGCAGCAGAAAACCTGGTTTCGGCTCCGACGCTTC CTCAACGTTCCCGCCCGTATGACCAAAGAAAAGGCAACTCGCATCCGCAACGCCGTGGCATGGGCTCCGGAGAGG GCCGACTACCGGGATCGCTGGCACTATAAAGAGGCAACGCCGTTTGGACGCCTCGCCAGGGAGCGCTTCCGACGA GACGGTCTTCTTCTGCCGTTTGGTCACCCGCGACTCGGATTCGATATCCCTAATCCGATGCTGTTCCAATTCAGC AGCTGGATTCTCAACGACAAGGCTGATCCGAGAGACGGTTGGGCCATCTCCGAAGTCCAGCGCTGCTCGTGGCCT GCTTCCGAAGACTGGTACGGAAGATTGACGGCTCATCTGACGGCCCTGCTTGAAAAGTTCATCGCGAGGCTGGGC AAGAACAACGTCAGCTTTCAGCTGTACAACACCGACGCTCGAGTACTCCCGTATTACCTGGAGGATAGAAAATTC GACAGAATCGAGGTGTCCAACATCTGCGACGCGGGCTACATCGGCCTCAGCCACACCTTGTGCGTCTATGCCAAC TACCTGCAGCATCCAGAGGAGAACCCTCACGCGACACTCATAGGCACCTTTGTCAACGGCGTCAAGGAGGTGTCG ATGCTGGAAGACACAGGGGGACAGATTCCTAACATCGAATTCTTGACTCGGATGCTTCCCCCTCCGTCCATCTTG TCCCTAACTTTTTGGGACAGCGCAGACATCACCAGGCTCTGGGATGCGCGCTACATGGCCAGGGACGTCGACGCG CTGTTTAAAAAGTATGTAGAGTTGTGCAGGTTTGACAGCATCGCTGCCGAGAATGGACTCGAGATGAAGGCGGAC AACACCATCGTCGACAAATGGCCCACTCGGCTCAAGGCTCAGTCCGAAGATGCGGTCAACGTCGAAGAGTTTCGA CTGTTCTTGGCAGCCGGCTTCAATAATTTGGAGCGATGCGTTGAATGGAAGAGACGAGCAGAGGTTGTCTCAGAG TCGTAA |
Transcript | >Ophun1|7227 ATGGCCGAACCGGCCCTCTCCTCACCTCGTTGCGCCCACTGGACAGCAAAAGGCTTCTCCTGCAACAAGCCCGCC ACAAAGATATGCGCCAACTGCAAACTCGTCGTTTACTGCGGAGCGGACTGCCAGAGAGAACACTGGCCCGAGCAC AAGAAACAATGCAAGTCGGACATGGCGAAGCTCTCTTGGCGTCCGGCCTGGGACCGCCAACATCGCAAACCGGCC TGGACTTTCGAAGACGCTGCAGAGAGCTGCCGCGGCTCCTTTGGCGCTTCGGGAGACTTGCGTCATGTCGTCAAG ACGCTCGCCCATCTCCCAAACACCATCGACCAGAAAGTCCAGTTCGTCATCAACGACAGAGACTCGGATGTCGTA GCAAGAAACGCCATCCTGCTACTCCTTGCTTTCGATGCAGCCCGTTCGCCTGGTGAAGACGAGGCCGCAACCGTC TCCGCCACCGTCGAAGCAATCATGCACCTCTGGTACTCTGCCTTTATCCCGCAGAGGGTCCTTACGCGCCTGCAG CAGAGCGTTGGGCCCTTGATCAACGAGATGTGCCACAGCATCGCGACGGAGCCTGCCGACAACATCTTTCGCAAG TCCTGGCAGGCTTCGGATGGCGCATGCCTGAGCCTGACCCTGCAGCAGAAAACCTGGTTTCGGCTCCGACGCTTC CTCAACGTTCCCGCCCGTATGACCAAAGAAAAGGCAACTCGCATCCGCAACGCCGTGGCATGGGCTCCGGAGAGG GCCGACTACCGGGATCGCTGGCACTATAAAGAGGCAACGCCGTTTGGACGCCTCGCCAGGGAGCGCTTCCGACGA GACGGTCTTCTTCTGCCGTTTGGTCACCCGCGACTCGGATTCGATATCCCTAATCCGATGCTGTTCCAATTCAGC AGCTGGATTCTCAACGACAAGGCTGATCCGAGAGACGGTTGGGCCATCTCCGAAGTCCAGCGCTGCTCGTGGCCT GCTTCCGAAGACTGGTACGGAAGATTGACGGCTCATCTGACGGCCCTGCTTGAAAAGTTCATCGCGAGGCTGGGC AAGAACAACGTCAGCTTTCAGCTGTACAACACCGACGCTCGAGTACTCCCGTATTACCTGGAGGATAGAAAATTC GACAGAATCGAGGTGTCCAACATCTGCGACGCGGGCTACATCGGCCTCAGCCACACCTTGTGCGTCTATGCCAAC TACCTGCAGCATCCAGAGGAGAACCCTCACGCGACACTCATAGGCACCTTTGTCAACGGCGTCAAGGAGGTGTCG ATGCTGGAAGACACAGGGGGACAGATTCCTAACATCGAATTCTTGACTCGGATGCTTCCCCCTCCGTCCATCTTG TCCCTAACTTTTTGGGACAGCGCAGACATCACCAGGCTCTGGGATGCGCGCTACATGGCCAGGGACGTCGACGCG CTGTTTAAAAAGTATGTAGAGTTGTGCAGGTTTGACAGCATCGCTGCCGAGAATGGACTCGAGATGAAGGCGGAC AACACCATCGTCGACAAATGGCCCACTCGGCTCAAGGCTCAGTCCGAAGATGCGGTCAACGTCGAAGAGTTTCGA CTGTTCTTGGCAGCCGGCTTCAATAATTTGGAGCGATGCGTTGAATGGAAGAGACGAGCAGAGGTTGTCTCAGAG TCGTAA |
Gene | >Ophun1|7227 ATGGCCGAACCGGCCCTCTCCTCACCTCGTTGCGCCCACTGGACAGCAAAAGGCTTCTCCTGCAACAAGCCCGCC ACAAAGATATGCGCCAACTGCAAACTCGTCGTTGTAAGTGCAAACCGAGAACCACCAGCCAGCTATAGCTTCTCA CCAGCACGGCCTCAGTACTGCGGAGCGGACTGCCAGAGAGAACACTGGCCCGAGCACAAGAAACAATGCAAGTCG GACATGGCGAAGCTCTCTTGGCGTCCGGCCTGGGACCGCCAACATCGCAAACCGGCCTGGACTTTCGAAGACGCT GCAGAGAGCTGCCGCGGCTCCTTTGGCGGTAATCAGTACCTCTGGGGCAACACTCCTGCCTTTGACATGCTGCAG CTAGACAAGAATGAGGGACTGGACTATCAGAAAGATCTCTTCCTGCTGCTGGCTGGCGAGTCGTCCTTCCCGGCT GCTTCTCATGAGCTCTGCTGACTCGCACAAGCTTCGGGAGACTTGCGTCATGTCGTCAAGACGCTCGCCCATCTC CCAAACACCATCGACCAGAAAGTCCAGTTCGTCATCAACGACAGAGACTCGGATGTCGTAGCAAGAAACGCCATC CTGCTACTCCTTGCTTTCGATGCAGCCCGTTCGCCTGGTGAAGACGAGGCCGCAACCGTCTCCGCCACCGTCGAA GCAATCATGCACCTCTGGTACTCTGCCTTTATCCCGCAGAGGGTCCTTACGCGCCTGCAGCAGAGCGTTGGGCCC TTGATCAACGAGATGTGCCACAGCATCGCGACGGAGCCTGCCGACAACATCTTTCGCAAGTCCTGGCAGGCTTCG GATGGCGCATGCCTGAGCCTGACCCTGCAGCAGAAAACCTGGTTTCGGCTCCGACGCTTCCTCAACGTTCCCGCC CGTATGACCAAAGAAAAGGCAACTCGCATCCGCAACGCCGTGGCATGGGCTCCGGAGAGGGCCGACTACCGGGAT CGCTGGCACTATAAAGAGGCAACGCCGTTTGGACGCCTCGCCAGGGAGCGCTTCCGACGAGACGGTCTTCTTCTG CCGTTTGGTCACCCGCGACTCGGATTCGATATCCCTAATCCGTGAGTCAAGAGTTCAAGTCCGCTCTGGTAAGAA AGCAGACTAAAGGGGAGCTCAGGATGCTGTTCCAATTCAGCAGCTGGATTCTCAACGACAAGGCTGATCCGAGAG ACGGTTGGGCCATCTCCGAAGTCCAGCGCTGCTCGTGGCCTGCTTCCGAAGACTGGTACGGAAGATTGACGGCTC ATCTGACGGCCCTGCTTGAAAAGTTCATCGCGAGGCTGGGCAAGAACAACGTCAGCTTTCAGCTGTACAACACCG ACGCTCGAGTACTCCCGTATTACCTGGAGGATAGAAAATTCGACAGAATCGAGGTAAGCAACCCCCTGAAACCTG CGTAGGTTATGGCTCAACAGTGTTCAAGGTGTCCAACATCTGCGACGCGGGCTACATCGGCCTCAGCCACACCTT GTGCGTCTATGCCAACTACCTGCAGCATCCAGAGGAGAACCCTCACGCGACACTCATAGGCACCTTTGTCAACGG CGTCAAGGAGGTGTCGATGCTGGAAGACACAGGGGGACAGATTCCTAACATCGAATTCTTGACTCGGATGCTTCC CCCTCCGTCCATCTTGTCCCTAACTTTTTGGGACAGCGCAGACATCACCAGGCTCTGGGATGCGCGCTACATGGC CAGGGACGTCGACGCGCTGTTTAAAAAGTAAGAGATGCGGAGTTGTCTGTCGAGACTGAACGCTGACGAGTCCAA GGTATGTAGAGTTGTGCAGGTTTGACAGCATCGCTGCCGAGAATGGACTCGAGATGAAGGCGGACAACACCATCG TCGACAAATGGCCCACTCGGCTCAAGGCTCAGTCCGAAGATGCGGTCAACGTCGAAGAGTTTCGACTGTTCTTGG CAGCCGGCTTCAATAATTTGGAGCGATGCGTTGAATGGAAGAGACGAGCAGAGGTTGTCTCAGAGTCGTAA |