Protein ID | Ophun1|7219 |
Gene name | |
Location | Contig_88:10155..11074 |
Strand | + |
Gene length (bp) | 919 |
Transcript length (bp) | 861 |
Coding sequence length (bp) | 861 |
Protein length (aa) | 287 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06912 | DUF1275 | Protein of unknown function (DUF1275) | 1.2E-42 | 65 | 269 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 111 | 130 | 19 |
2 | 143 | 162 | 19 |
3 | 172 | 191 | 19 |
4 | 231 | 248 | 17 |
5 | 252 | 274 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 4133 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|7219 MFCRLPLQAAKHAPEKKSRAPEPVSQEISSKTSAGSFWPVTPERSRLLSHFSDDVRSSLFAEAQLVLLTFCTGIQ DVTTFLDYHCFASNQTGNTVFLCIALIISQIEGDTFVTANVGMSLGVFLAAGWLTGQLSHVIGGRKRWWLVSCNL LQTALVFTVAGIQYRYGSSDRGPVALGVIALLAFAAGGQVVQSRSLRITEISTAMATAAWVDLVMDGKLFVLHNR PRNRRVAFLTALAVGSLVGAAVYRQLGSAAAIAISAAGKLLVTVLYLFSPAESQRQEEAEV* |
Coding | >Ophun1|7219 ATGTTCTGTCGCCTGCCTCTTCAGGCGGCAAAGCACGCCCCAGAGAAGAAGTCGAGGGCTCCCGAGCCCGTATCC CAGGAGATCTCGTCCAAAACCAGCGCCGGCTCCTTCTGGCCCGTTACACCGGAACGGAGCCGGCTTCTCAGCCAC TTCTCCGACGATGTCCGCTCCTCCCTCTTCGCCGAGGCGCAGCTCGTGCTTCTGACCTTTTGCACGGGAATTCAA GACGTCACCACCTTTCTCGACTATCACTGCTTCGCCTCGAACCAGACCGGCAACACCGTCTTCCTCTGCATCGCC CTCATCATCTCCCAGATCGAGGGCGACACCTTCGTGACGGCCAACGTCGGCATGTCCCTCGGCGTCTTCCTGGCC GCAGGATGGTTGACGGGCCAGCTGAGCCATGTCATCGGTGGGCGGAAGCGTTGGTGGCTGGTCTCGTGCAATCTT CTTCAAACGGCCCTCGTCTTCACCGTAGCCGGGATCCAGTACCGGTACGGCAGCTCCGATCGCGGACCCGTCGCC CTCGGCGTCATAGCCCTGTTGGCCTTTGCCGCGGGGGGGCAAGTGGTTCAGTCTCGCAGCCTGCGCATCACCGAG ATCAGCACTGCCATGGCGACAGCGGCCTGGGTGGACCTCGTCATGGACGGGAAGCTGTTTGTGCTGCACAACCGA CCGAGGAATCGCCGCGTCGCCTTTCTGACTGCTCTGGCCGTCGGATCTCTCGTTGGCGCCGCCGTCTACCGTCAG CTGGGCTCGGCGGCTGCCATTGCGATATCTGCGGCTGGCAAACTGCTCGTCACGGTCCTCTATCTGTTTTCGCCC GCTGAGTCCCAGCGACAGGAGGAGGCAGAGGTGTGA |
Transcript | >Ophun1|7219 ATGTTCTGTCGCCTGCCTCTTCAGGCGGCAAAGCACGCCCCAGAGAAGAAGTCGAGGGCTCCCGAGCCCGTATCC CAGGAGATCTCGTCCAAAACCAGCGCCGGCTCCTTCTGGCCCGTTACACCGGAACGGAGCCGGCTTCTCAGCCAC TTCTCCGACGATGTCCGCTCCTCCCTCTTCGCCGAGGCGCAGCTCGTGCTTCTGACCTTTTGCACGGGAATTCAA GACGTCACCACCTTTCTCGACTATCACTGCTTCGCCTCGAACCAGACCGGCAACACCGTCTTCCTCTGCATCGCC CTCATCATCTCCCAGATCGAGGGCGACACCTTCGTGACGGCCAACGTCGGCATGTCCCTCGGCGTCTTCCTGGCC GCAGGATGGTTGACGGGCCAGCTGAGCCATGTCATCGGTGGGCGGAAGCGTTGGTGGCTGGTCTCGTGCAATCTT CTTCAAACGGCCCTCGTCTTCACCGTAGCCGGGATCCAGTACCGGTACGGCAGCTCCGATCGCGGACCCGTCGCC CTCGGCGTCATAGCCCTGTTGGCCTTTGCCGCGGGGGGGCAAGTGGTTCAGTCTCGCAGCCTGCGCATCACCGAG ATCAGCACTGCCATGGCGACAGCGGCCTGGGTGGACCTCGTCATGGACGGGAAGCTGTTTGTGCTGCACAACCGA CCGAGGAATCGCCGCGTCGCCTTTCTGACTGCTCTGGCCGTCGGATCTCTCGTTGGCGCCGCCGTCTACCGTCAG CTGGGCTCGGCGGCTGCCATTGCGATATCTGCGGCTGGCAAACTGCTCGTCACGGTCCTCTATCTGTTTTCGCCC GCTGAGTCCCAGCGACAGGAGGAGGCAGAGGTGTGA |
Gene | >Ophun1|7219 ATGTTCTGTCGCCTGCCTCTTCAGGCGGCAAAGCACGCCCCAGAGAAGAAGTCGAGGGCTCCCGAGCCCGTATCC CAGGAGATCTCGTCCAAAACCAGCGCCGGCTCCTTCTGGCCCGTTACACCGGAACGGAGCCGGCTTCTCAGCCAC TTCTCCGACGATGTCCGCTCCTCCCTCTTCGCCGAGGCGCAGCTCGTGCTTCTGACCTTTTGCACGGGAATTCAA GGTGGACAGGAGAGCCCTCTTCGTGATTGTATGCTGAAGCTGACACGGCCGAACGCCAGACGTCACCACCTTTCT CGACTATCACTGCTTCGCCTCGAACCAGACCGGCAACACCGTCTTCCTCTGCATCGCCCTCATCATCTCCCAGAT CGAGGGCGACACCTTCGTGACGGCCAACGTCGGCATGTCCCTCGGCGTCTTCCTGGCCGCAGGATGGTTGACGGG CCAGCTGAGCCATGTCATCGGTGGGCGGAAGCGTTGGTGGCTGGTCTCGTGCAATCTTCTTCAAACGGCCCTCGT CTTCACCGTAGCCGGGATCCAGTACCGGTACGGCAGCTCCGATCGCGGACCCGTCGCCCTCGGCGTCATAGCCCT GTTGGCCTTTGCCGCGGGGGGGCAAGTGGTTCAGTCTCGCAGCCTGCGCATCACCGAGATCAGCACTGCCATGGC GACAGCGGCCTGGGTGGACCTCGTCATGGACGGGAAGCTGTTTGTGCTGCACAACCGACCGAGGAATCGCCGCGT CGCCTTTCTGACTGCTCTGGCCGTCGGATCTCTCGTTGGCGCCGCCGTCTACCGTCAGCTGGGCTCGGCGGCTGC CATTGCGATATCTGCGGCTGGCAAACTGCTCGTCACGGTCCTCTATCTGTTTTCGCCCGCTGAGTCCCAGCGACA GGAGGAGGCAGAGGTGTGA |