Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|7141
Gene name
LocationContig_86:20515..21033
Strand+
Gene length (bp)518
Transcript length (bp)387
Coding sequence length (bp)387
Protein length (aa) 129

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O74383|YNV8_SCHPO Uncharacterized protein C3H7.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.08c PE=4 SV=1 20 121 1.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 36 55 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|7141
MASITARRLFSTSLRRLEGAIPKEELKQESKRNPELMILGGVMVAAIGGAGFYFARSPTSATSEAPVSIAKSAWE
SGTDGKYHYHPGGDPKKDPKQAPSALNVVIVPDVTLPKELHDKFNKWGKDGYP*
Coding >Ophun1|7141
ATGGCCTCCATAACTGCCCGTCGTCTCTTCTCCACCTCCCTCCGTCGCCTTGAGGGGGCCATCCCCAAGGAGGAG
CTCAAGCAAGAATCGAAGCGCAACCCGGAGCTAATGATTCTCGGAGGTGTCATGGTTGCTGCCATTGGAGGCGCT
GGCTTCTACTTTGCCCGGAGCCCGACATCGGCCACCTCGGAGGCGCCAGTCAGCATCGCTAAGAGCGCCTGGGAG
TCCGGCACGGACGGCAAATACCACTACCACCCCGGTGGCGACCCCAAAAAAGACCCCAAGCAGGCGCCCAGTGCC
CTGAACGTCGTCATCGTGCCCGACGTCACCCTTCCCAAGGAGCTGCACGACAAGTTCAACAAGTGGGGTAAAGAC
GGTTATCCATGA
Transcript >Ophun1|7141
ATGGCCTCCATAACTGCCCGTCGTCTCTTCTCCACCTCCCTCCGTCGCCTTGAGGGGGCCATCCCCAAGGAGGAG
CTCAAGCAAGAATCGAAGCGCAACCCGGAGCTAATGATTCTCGGAGGTGTCATGGTTGCTGCCATTGGAGGCGCT
GGCTTCTACTTTGCCCGGAGCCCGACATCGGCCACCTCGGAGGCGCCAGTCAGCATCGCTAAGAGCGCCTGGGAG
TCCGGCACGGACGGCAAATACCACTACCACCCCGGTGGCGACCCCAAAAAAGACCCCAAGCAGGCGCCCAGTGCC
CTGAACGTCGTCATCGTGCCCGACGTCACCCTTCCCAAGGAGCTGCACGACAAGTTCAACAAGTGGGGTAAAGAC
GGTTATCCATGA
Gene >Ophun1|7141
ATGGCCTCCATAACTGCCCGTCGTCTCTTCTCCACCTCCCTCCGTCGCCTTGAGGGGGCCATCCCCAAGGAGGAG
CTCAAGCAAGAATCGAAGCGCAACCCGGAGCTAATGGTTCGTCGGCCGCGCGTAGCAACGACAATGCTGCTGCTC
TGACACGCATATATGGCTGAACATCTTCATGATCGCTTAGATTCTCGGAGGTGTCATGGTTGCTGCCATTGGAGG
CGCTGGCTTCTACTTTGGTATGTCAAACGGATCGCCGTCAACGCACCAGTCGAGCTGATCTTTTTTCAGCCCGGA
GCCCGACATCGGCCACCTCGGAGGCGCCAGTCAGCATCGCTAAGAGCGCCTGGGAGTCCGGCACGGACGGCAAAT
ACCACTACCACCCCGGTGGCGACCCCAAAAAAGACCCCAAGCAGGCGCCCAGTGCCCTGAACGTCGTCATCGTGC
CCGACGTCACCCTTCCCAAGGAGCTGCACGACAAGTTCAACAAGTGGGGTAAAGACGGTTATCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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