Protein ID | Ophun1|7128 |
Gene name | |
Location | Contig_859:1074..2541 |
Strand | + |
Gene length (bp) | 1467 |
Transcript length (bp) | 1467 |
Coding sequence length (bp) | 1467 |
Protein length (aa) | 489 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF16679 | CDT1_C | DNA replication factor Cdt1 C-terminal domain | 2.3E-20 | 361 | 459 |
Orthofinder run ID | 4 |
Orthogroup | 6446 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|7128 MPRPSRRRQPALPQDARPIDTFARVSKGHASSRDKLAIGSVADAPKTRKRKAASARDGEEDGLVRRTRSFPPSSD EDELRHPVSLKRICRRDDAEPQPEPRAPPKEKKVAKAPPSGVERAQRPSRSSIIAEARRRGSTCRRVRTGAEIGL AHKSKEIVSSIPCHLAELIDLNGALLRTVALHMAHNGRNAPVDMRSAIPDVSRTWGKRQVTVADIRRCIALQSGD GDASSPLIVSDYGGGRICIEISPDFTGAMIDEDGLVKRVRDNLAALCARRAAEDASEVEKDGDSKMMEDKDVDVL LQGLSIADLPQAAVADVAASAKMDPTRAKGQRALAQFKSGLAAKQLEKEAKQQAHQGSSISLLERLRAKGLARAS ETLPHTAEAIGRRAALHRVGEVAAIISMLSLSMPASGRQAFTMAALSQKIRDSQRMPMSGDEAVACVRLITTELA PEWLRLVRLGGRENVVVQRGNQPVERDLEERVQRQLAA* |
Coding | >Ophun1|7128 ATGCCTCGCCCTTCCAGGAGACGCCAACCGGCGCTTCCCCAGGATGCCCGACCCATCGACACCTTCGCGCGCGTT TCCAAGGGTCACGCCTCCTCGCGCGACAAGCTGGCCATCGGGTCCGTGGCTGATGCTCCGAAGACGCGCAAGAGA AAGGCGGCTTCCGCTCGAGATGGCGAAGAGGATGGGCTTGTTCGACGCACTCGGTCCTTCCCACCTAGCAGCGAC GAGGACGAGCTGCGGCATCCGGTCTCGTTGAAGAGGATCTGCCGACGCGATGATGCCGAACCGCAGCCCGAGCCT CGCGCACCGCCCAAGGAAAAGAAGGTCGCCAAAGCGCCCCCGTCGGGTGTGGAGCGCGCTCAGAGGCCCAGCCGA TCCAGTATCATCGCCGAGGCCCGGCGCCGGGGAAGCACCTGTCGCCGTGTACGGACCGGCGCCGAGATCGGGCTG GCCCACAAGTCTAAAGAGATCGTCTCATCCATCCCGTGCCACTTGGCGGAGCTTATCGATCTCAATGGCGCTCTG CTACGGACGGTGGCCCTTCACATGGCGCATAACGGGAGGAACGCACCCGTCGACATGCGCTCTGCCATCCCAGAC GTTTCGCGCACTTGGGGCAAGCGTCAGGTTACCGTGGCGGATATTCGCCGATGCATCGCCTTGCAGTCTGGTGAT GGGGATGCTTCGTCGCCGCTCATCGTGTCCGACTACGGCGGCGGCAGGATCTGCATTGAGATATCACCGGACTTC ACCGGCGCCATGATTGACGAAGATGGTCTCGTCAAACGGGTTCGGGACAATCTGGCGGCCTTGTGTGCCCGACGG GCGGCCGAGGACGCCTCCGAGGTGGAAAAGGACGGCGACAGCAAGATGATGGAGGACAAGGACGTCGACGTGCTC CTACAGGGTCTTTCCATCGCCGACCTTCCGCAGGCTGCCGTGGCGGACGTGGCGGCGTCGGCCAAGATGGACCCA ACACGGGCCAAGGGGCAGAGGGCCTTGGCCCAGTTCAAGAGCGGGCTCGCGGCCAAGCAGCTGGAGAAGGAGGCC AAGCAACAAGCTCACCAAGGTAGCAGCATCAGCCTCCTGGAGCGACTGCGGGCCAAAGGACTAGCCAGGGCCAGC GAGACCCTCCCACACACGGCGGAGGCGATTGGCCGACGGGCGGCTCTACACCGCGTGGGCGAGGTGGCGGCCATC ATTTCGATGCTCAGCCTCTCAATGCCGGCGTCAGGGCGTCAAGCTTTCACAATGGCGGCGCTGTCACAGAAGATC CGCGACTCGCAGCGGATGCCTATGTCGGGCGACGAGGCGGTGGCGTGCGTCCGGCTGATTACTACCGAGCTGGCG CCAGAGTGGCTCCGGCTGGTGAGGCTGGGCGGACGGGAAAACGTGGTGGTACAGCGAGGCAATCAGCCGGTCGAG CGGGATCTGGAGGAGCGGGTGCAGCGGCAGTTGGCGGCGTGA |
Transcript | >Ophun1|7128 ATGCCTCGCCCTTCCAGGAGACGCCAACCGGCGCTTCCCCAGGATGCCCGACCCATCGACACCTTCGCGCGCGTT TCCAAGGGTCACGCCTCCTCGCGCGACAAGCTGGCCATCGGGTCCGTGGCTGATGCTCCGAAGACGCGCAAGAGA AAGGCGGCTTCCGCTCGAGATGGCGAAGAGGATGGGCTTGTTCGACGCACTCGGTCCTTCCCACCTAGCAGCGAC GAGGACGAGCTGCGGCATCCGGTCTCGTTGAAGAGGATCTGCCGACGCGATGATGCCGAACCGCAGCCCGAGCCT CGCGCACCGCCCAAGGAAAAGAAGGTCGCCAAAGCGCCCCCGTCGGGTGTGGAGCGCGCTCAGAGGCCCAGCCGA TCCAGTATCATCGCCGAGGCCCGGCGCCGGGGAAGCACCTGTCGCCGTGTACGGACCGGCGCCGAGATCGGGCTG GCCCACAAGTCTAAAGAGATCGTCTCATCCATCCCGTGCCACTTGGCGGAGCTTATCGATCTCAATGGCGCTCTG CTACGGACGGTGGCCCTTCACATGGCGCATAACGGGAGGAACGCACCCGTCGACATGCGCTCTGCCATCCCAGAC GTTTCGCGCACTTGGGGCAAGCGTCAGGTTACCGTGGCGGATATTCGCCGATGCATCGCCTTGCAGTCTGGTGAT GGGGATGCTTCGTCGCCGCTCATCGTGTCCGACTACGGCGGCGGCAGGATCTGCATTGAGATATCACCGGACTTC ACCGGCGCCATGATTGACGAAGATGGTCTCGTCAAACGGGTTCGGGACAATCTGGCGGCCTTGTGTGCCCGACGG GCGGCCGAGGACGCCTCCGAGGTGGAAAAGGACGGCGACAGCAAGATGATGGAGGACAAGGACGTCGACGTGCTC CTACAGGGTCTTTCCATCGCCGACCTTCCGCAGGCTGCCGTGGCGGACGTGGCGGCGTCGGCCAAGATGGACCCA ACACGGGCCAAGGGGCAGAGGGCCTTGGCCCAGTTCAAGAGCGGGCTCGCGGCCAAGCAGCTGGAGAAGGAGGCC AAGCAACAAGCTCACCAAGGTAGCAGCATCAGCCTCCTGGAGCGACTGCGGGCCAAAGGACTAGCCAGGGCCAGC GAGACCCTCCCACACACGGCGGAGGCGATTGGCCGACGGGCGGCTCTACACCGCGTGGGCGAGGTGGCGGCCATC ATTTCGATGCTCAGCCTCTCAATGCCGGCGTCAGGGCGTCAAGCTTTCACAATGGCGGCGCTGTCACAGAAGATC CGCGACTCGCAGCGGATGCCTATGTCGGGCGACGAGGCGGTGGCGTGCGTCCGGCTGATTACTACCGAGCTGGCG CCAGAGTGGCTCCGGCTGGTGAGGCTGGGCGGACGGGAAAACGTGGTGGTACAGCGAGGCAATCAGCCGGTCGAG CGGGATCTGGAGGAGCGGGTGCAGCGGCAGTTGGCGGCGTGA |
Gene | >Ophun1|7128 ATGCCTCGCCCTTCCAGGAGACGCCAACCGGCGCTTCCCCAGGATGCCCGACCCATCGACACCTTCGCGCGCGTT TCCAAGGGTCACGCCTCCTCGCGCGACAAGCTGGCCATCGGGTCCGTGGCTGATGCTCCGAAGACGCGCAAGAGA AAGGCGGCTTCCGCTCGAGATGGCGAAGAGGATGGGCTTGTTCGACGCACTCGGTCCTTCCCACCTAGCAGCGAC GAGGACGAGCTGCGGCATCCGGTCTCGTTGAAGAGGATCTGCCGACGCGATGATGCCGAACCGCAGCCCGAGCCT CGCGCACCGCCCAAGGAAAAGAAGGTCGCCAAAGCGCCCCCGTCGGGTGTGGAGCGCGCTCAGAGGCCCAGCCGA TCCAGTATCATCGCCGAGGCCCGGCGCCGGGGAAGCACCTGTCGCCGTGTACGGACCGGCGCCGAGATCGGGCTG GCCCACAAGTCTAAAGAGATCGTCTCATCCATCCCGTGCCACTTGGCGGAGCTTATCGATCTCAATGGCGCTCTG CTACGGACGGTGGCCCTTCACATGGCGCATAACGGGAGGAACGCACCCGTCGACATGCGCTCTGCCATCCCAGAC GTTTCGCGCACTTGGGGCAAGCGTCAGGTTACCGTGGCGGATATTCGCCGATGCATCGCCTTGCAGTCTGGTGAT GGGGATGCTTCGTCGCCGCTCATCGTGTCCGACTACGGCGGCGGCAGGATCTGCATTGAGATATCACCGGACTTC ACCGGCGCCATGATTGACGAAGATGGTCTCGTCAAACGGGTTCGGGACAATCTGGCGGCCTTGTGTGCCCGACGG GCGGCCGAGGACGCCTCCGAGGTGGAAAAGGACGGCGACAGCAAGATGATGGAGGACAAGGACGTCGACGTGCTC CTACAGGGTCTTTCCATCGCCGACCTTCCGCAGGCTGCCGTGGCGGACGTGGCGGCGTCGGCCAAGATGGACCCA ACACGGGCCAAGGGGCAGAGGGCCTTGGCCCAGTTCAAGAGCGGGCTCGCGGCCAAGCAGCTGGAGAAGGAGGCC AAGCAACAAGCTCACCAAGGTAGCAGCATCAGCCTCCTGGAGCGACTGCGGGCCAAAGGACTAGCCAGGGCCAGC GAGACCCTCCCACACACGGCGGAGGCGATTGGCCGACGGGCGGCTCTACACCGCGTGGGCGAGGTGGCGGCCATC ATTTCGATGCTCAGCCTCTCAATGCCGGCGTCAGGGCGTCAAGCTTTCACAATGGCGGCGCTGTCACAGAAGATC CGCGACTCGCAGCGGATGCCTATGTCGGGCGACGAGGCGGTGGCGTGCGTCCGGCTGATTACTACCGAGCTGGCG CCAGAGTGGCTCCGGCTGGTGAGGCTGGGCGGACGGGAAAACGTGGTGGTACAGCGAGGCAATCAGCCGGTCGAG CGGGATCTGGAGGAGCGGGTGCAGCGGCAGTTGGCGGCGTGA |