Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|7128
Gene name
LocationContig_859:1074..2541
Strand+
Gene length (bp)1467
Transcript length (bp)1467
Coding sequence length (bp)1467
Protein length (aa) 489

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16679 CDT1_C DNA replication factor Cdt1 C-terminal domain 2.3E-20 361 459

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|7128
MPRPSRRRQPALPQDARPIDTFARVSKGHASSRDKLAIGSVADAPKTRKRKAASARDGEEDGLVRRTRSFPPSSD
EDELRHPVSLKRICRRDDAEPQPEPRAPPKEKKVAKAPPSGVERAQRPSRSSIIAEARRRGSTCRRVRTGAEIGL
AHKSKEIVSSIPCHLAELIDLNGALLRTVALHMAHNGRNAPVDMRSAIPDVSRTWGKRQVTVADIRRCIALQSGD
GDASSPLIVSDYGGGRICIEISPDFTGAMIDEDGLVKRVRDNLAALCARRAAEDASEVEKDGDSKMMEDKDVDVL
LQGLSIADLPQAAVADVAASAKMDPTRAKGQRALAQFKSGLAAKQLEKEAKQQAHQGSSISLLERLRAKGLARAS
ETLPHTAEAIGRRAALHRVGEVAAIISMLSLSMPASGRQAFTMAALSQKIRDSQRMPMSGDEAVACVRLITTELA
PEWLRLVRLGGRENVVVQRGNQPVERDLEERVQRQLAA*
Coding >Ophun1|7128
ATGCCTCGCCCTTCCAGGAGACGCCAACCGGCGCTTCCCCAGGATGCCCGACCCATCGACACCTTCGCGCGCGTT
TCCAAGGGTCACGCCTCCTCGCGCGACAAGCTGGCCATCGGGTCCGTGGCTGATGCTCCGAAGACGCGCAAGAGA
AAGGCGGCTTCCGCTCGAGATGGCGAAGAGGATGGGCTTGTTCGACGCACTCGGTCCTTCCCACCTAGCAGCGAC
GAGGACGAGCTGCGGCATCCGGTCTCGTTGAAGAGGATCTGCCGACGCGATGATGCCGAACCGCAGCCCGAGCCT
CGCGCACCGCCCAAGGAAAAGAAGGTCGCCAAAGCGCCCCCGTCGGGTGTGGAGCGCGCTCAGAGGCCCAGCCGA
TCCAGTATCATCGCCGAGGCCCGGCGCCGGGGAAGCACCTGTCGCCGTGTACGGACCGGCGCCGAGATCGGGCTG
GCCCACAAGTCTAAAGAGATCGTCTCATCCATCCCGTGCCACTTGGCGGAGCTTATCGATCTCAATGGCGCTCTG
CTACGGACGGTGGCCCTTCACATGGCGCATAACGGGAGGAACGCACCCGTCGACATGCGCTCTGCCATCCCAGAC
GTTTCGCGCACTTGGGGCAAGCGTCAGGTTACCGTGGCGGATATTCGCCGATGCATCGCCTTGCAGTCTGGTGAT
GGGGATGCTTCGTCGCCGCTCATCGTGTCCGACTACGGCGGCGGCAGGATCTGCATTGAGATATCACCGGACTTC
ACCGGCGCCATGATTGACGAAGATGGTCTCGTCAAACGGGTTCGGGACAATCTGGCGGCCTTGTGTGCCCGACGG
GCGGCCGAGGACGCCTCCGAGGTGGAAAAGGACGGCGACAGCAAGATGATGGAGGACAAGGACGTCGACGTGCTC
CTACAGGGTCTTTCCATCGCCGACCTTCCGCAGGCTGCCGTGGCGGACGTGGCGGCGTCGGCCAAGATGGACCCA
ACACGGGCCAAGGGGCAGAGGGCCTTGGCCCAGTTCAAGAGCGGGCTCGCGGCCAAGCAGCTGGAGAAGGAGGCC
AAGCAACAAGCTCACCAAGGTAGCAGCATCAGCCTCCTGGAGCGACTGCGGGCCAAAGGACTAGCCAGGGCCAGC
GAGACCCTCCCACACACGGCGGAGGCGATTGGCCGACGGGCGGCTCTACACCGCGTGGGCGAGGTGGCGGCCATC
ATTTCGATGCTCAGCCTCTCAATGCCGGCGTCAGGGCGTCAAGCTTTCACAATGGCGGCGCTGTCACAGAAGATC
CGCGACTCGCAGCGGATGCCTATGTCGGGCGACGAGGCGGTGGCGTGCGTCCGGCTGATTACTACCGAGCTGGCG
CCAGAGTGGCTCCGGCTGGTGAGGCTGGGCGGACGGGAAAACGTGGTGGTACAGCGAGGCAATCAGCCGGTCGAG
CGGGATCTGGAGGAGCGGGTGCAGCGGCAGTTGGCGGCGTGA
Transcript >Ophun1|7128
ATGCCTCGCCCTTCCAGGAGACGCCAACCGGCGCTTCCCCAGGATGCCCGACCCATCGACACCTTCGCGCGCGTT
TCCAAGGGTCACGCCTCCTCGCGCGACAAGCTGGCCATCGGGTCCGTGGCTGATGCTCCGAAGACGCGCAAGAGA
AAGGCGGCTTCCGCTCGAGATGGCGAAGAGGATGGGCTTGTTCGACGCACTCGGTCCTTCCCACCTAGCAGCGAC
GAGGACGAGCTGCGGCATCCGGTCTCGTTGAAGAGGATCTGCCGACGCGATGATGCCGAACCGCAGCCCGAGCCT
CGCGCACCGCCCAAGGAAAAGAAGGTCGCCAAAGCGCCCCCGTCGGGTGTGGAGCGCGCTCAGAGGCCCAGCCGA
TCCAGTATCATCGCCGAGGCCCGGCGCCGGGGAAGCACCTGTCGCCGTGTACGGACCGGCGCCGAGATCGGGCTG
GCCCACAAGTCTAAAGAGATCGTCTCATCCATCCCGTGCCACTTGGCGGAGCTTATCGATCTCAATGGCGCTCTG
CTACGGACGGTGGCCCTTCACATGGCGCATAACGGGAGGAACGCACCCGTCGACATGCGCTCTGCCATCCCAGAC
GTTTCGCGCACTTGGGGCAAGCGTCAGGTTACCGTGGCGGATATTCGCCGATGCATCGCCTTGCAGTCTGGTGAT
GGGGATGCTTCGTCGCCGCTCATCGTGTCCGACTACGGCGGCGGCAGGATCTGCATTGAGATATCACCGGACTTC
ACCGGCGCCATGATTGACGAAGATGGTCTCGTCAAACGGGTTCGGGACAATCTGGCGGCCTTGTGTGCCCGACGG
GCGGCCGAGGACGCCTCCGAGGTGGAAAAGGACGGCGACAGCAAGATGATGGAGGACAAGGACGTCGACGTGCTC
CTACAGGGTCTTTCCATCGCCGACCTTCCGCAGGCTGCCGTGGCGGACGTGGCGGCGTCGGCCAAGATGGACCCA
ACACGGGCCAAGGGGCAGAGGGCCTTGGCCCAGTTCAAGAGCGGGCTCGCGGCCAAGCAGCTGGAGAAGGAGGCC
AAGCAACAAGCTCACCAAGGTAGCAGCATCAGCCTCCTGGAGCGACTGCGGGCCAAAGGACTAGCCAGGGCCAGC
GAGACCCTCCCACACACGGCGGAGGCGATTGGCCGACGGGCGGCTCTACACCGCGTGGGCGAGGTGGCGGCCATC
ATTTCGATGCTCAGCCTCTCAATGCCGGCGTCAGGGCGTCAAGCTTTCACAATGGCGGCGCTGTCACAGAAGATC
CGCGACTCGCAGCGGATGCCTATGTCGGGCGACGAGGCGGTGGCGTGCGTCCGGCTGATTACTACCGAGCTGGCG
CCAGAGTGGCTCCGGCTGGTGAGGCTGGGCGGACGGGAAAACGTGGTGGTACAGCGAGGCAATCAGCCGGTCGAG
CGGGATCTGGAGGAGCGGGTGCAGCGGCAGTTGGCGGCGTGA
Gene >Ophun1|7128
ATGCCTCGCCCTTCCAGGAGACGCCAACCGGCGCTTCCCCAGGATGCCCGACCCATCGACACCTTCGCGCGCGTT
TCCAAGGGTCACGCCTCCTCGCGCGACAAGCTGGCCATCGGGTCCGTGGCTGATGCTCCGAAGACGCGCAAGAGA
AAGGCGGCTTCCGCTCGAGATGGCGAAGAGGATGGGCTTGTTCGACGCACTCGGTCCTTCCCACCTAGCAGCGAC
GAGGACGAGCTGCGGCATCCGGTCTCGTTGAAGAGGATCTGCCGACGCGATGATGCCGAACCGCAGCCCGAGCCT
CGCGCACCGCCCAAGGAAAAGAAGGTCGCCAAAGCGCCCCCGTCGGGTGTGGAGCGCGCTCAGAGGCCCAGCCGA
TCCAGTATCATCGCCGAGGCCCGGCGCCGGGGAAGCACCTGTCGCCGTGTACGGACCGGCGCCGAGATCGGGCTG
GCCCACAAGTCTAAAGAGATCGTCTCATCCATCCCGTGCCACTTGGCGGAGCTTATCGATCTCAATGGCGCTCTG
CTACGGACGGTGGCCCTTCACATGGCGCATAACGGGAGGAACGCACCCGTCGACATGCGCTCTGCCATCCCAGAC
GTTTCGCGCACTTGGGGCAAGCGTCAGGTTACCGTGGCGGATATTCGCCGATGCATCGCCTTGCAGTCTGGTGAT
GGGGATGCTTCGTCGCCGCTCATCGTGTCCGACTACGGCGGCGGCAGGATCTGCATTGAGATATCACCGGACTTC
ACCGGCGCCATGATTGACGAAGATGGTCTCGTCAAACGGGTTCGGGACAATCTGGCGGCCTTGTGTGCCCGACGG
GCGGCCGAGGACGCCTCCGAGGTGGAAAAGGACGGCGACAGCAAGATGATGGAGGACAAGGACGTCGACGTGCTC
CTACAGGGTCTTTCCATCGCCGACCTTCCGCAGGCTGCCGTGGCGGACGTGGCGGCGTCGGCCAAGATGGACCCA
ACACGGGCCAAGGGGCAGAGGGCCTTGGCCCAGTTCAAGAGCGGGCTCGCGGCCAAGCAGCTGGAGAAGGAGGCC
AAGCAACAAGCTCACCAAGGTAGCAGCATCAGCCTCCTGGAGCGACTGCGGGCCAAAGGACTAGCCAGGGCCAGC
GAGACCCTCCCACACACGGCGGAGGCGATTGGCCGACGGGCGGCTCTACACCGCGTGGGCGAGGTGGCGGCCATC
ATTTCGATGCTCAGCCTCTCAATGCCGGCGTCAGGGCGTCAAGCTTTCACAATGGCGGCGCTGTCACAGAAGATC
CGCGACTCGCAGCGGATGCCTATGTCGGGCGACGAGGCGGTGGCGTGCGTCCGGCTGATTACTACCGAGCTGGCG
CCAGAGTGGCTCCGGCTGGTGAGGCTGGGCGGACGGGAAAACGTGGTGGTACAGCGAGGCAATCAGCCGGTCGAG
CGGGATCTGGAGGAGCGGGTGCAGCGGCAGTTGGCGGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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