Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|7111
Gene name
LocationContig_850:1643..2590
Strand-
Gene length (bp)947
Transcript length (bp)897
Coding sequence length (bp)897
Protein length (aa) 299

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02544 Steroid_dh 3-oxo-5-alpha-steroid 4-dehydrogenase 2.4E-14 186 298

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P40526|DFG10_YEAST Polyprenol reductase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DFG10 PE=1 SV=1 13 297 7.0E-20
sp|Q7F0Q2|POED2_ORYSJ Polyprenol reductase 2 OS=Oryza sativa subsp. japonica GN=Os07g0493400 PE=2 SV=1 62 297 1.0E-14
sp|Q7XUH5|POED1_ORYSJ Polyprenol reductase 1 OS=Oryza sativa subsp. japonica GN=Os04g0576800 PE=2 SV=2 62 297 1.0E-14
sp|A2XWN6|POED1_ORYSI Polyprenol reductase 1 OS=Oryza sativa subsp. indica GN=OsI_17065 PE=3 SV=1 62 297 1.0E-14
sp|B8B6G5|POED2_ORYSI Polyprenol reductase 2 OS=Oryza sativa subsp. indica GN=OsI_26070 PE=3 SV=2 62 297 2.0E-14
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P40526|DFG10_YEAST Polyprenol reductase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DFG10 PE=1 SV=1 13 297 7.0E-20
sp|Q7F0Q2|POED2_ORYSJ Polyprenol reductase 2 OS=Oryza sativa subsp. japonica GN=Os07g0493400 PE=2 SV=1 62 297 1.0E-14
sp|Q7XUH5|POED1_ORYSJ Polyprenol reductase 1 OS=Oryza sativa subsp. japonica GN=Os04g0576800 PE=2 SV=2 62 297 1.0E-14
sp|A2XWN6|POED1_ORYSI Polyprenol reductase 1 OS=Oryza sativa subsp. indica GN=OsI_17065 PE=3 SV=1 62 297 1.0E-14
sp|B8B6G5|POED2_ORYSI Polyprenol reductase 2 OS=Oryza sativa subsp. indica GN=OsI_26070 PE=3 SV=2 62 297 2.0E-14
sp|Q9VLP9|PORED_DROME Polyprenol reductase OS=Drosophila melanogaster GN=CG7840 PE=2 SV=1 62 297 5.0E-14
sp|Q9CAH5|POED1_ARATH Polyprenol reductase 1 OS=Arabidopsis thaliana GN=At1g72590 PE=3 SV=1 61 298 2.0E-13
sp|Q0P4J9|PORED_XENTR Polyprenol reductase OS=Xenopus tropicalis GN=srd5a3 PE=2 SV=1 62 298 8.0E-13
sp|Q8AVI9|PORED_XENLA Polyprenol reductase OS=Xenopus laevis GN=srd5a3 PE=2 SV=1 62 298 1.0E-11
sp|O14264|YFP9_SCHPO Uncharacterized protein C7D4.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC7D4.09c PE=3 SV=3 19 298 5.0E-09
sp|Q9SI62|POED2_ARATH Polyprenol reductase 2 OS=Arabidopsis thaliana GN=At2g16530 PE=1 SV=2 61 298 7.0E-09
sp|A8X8R3|PORED_CAEBR Polyprenol reductase OS=Caenorhabditis briggsae GN=CBG09584 PE=3 SV=1 57 297 2.0E-07
sp|Q17428|PORED_CAEEL Polyprenol reductase OS=Caenorhabditis elegans GN=B0024.13 PE=3 SV=2 51 297 3.0E-06
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GO

GO Term Description Terminal node
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0006629 lipid metabolic process Yes
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:0071704 organic substance metabolic process No
GO:0003824 catalytic activity No
GO:0016491 oxidoreductase activity No
GO:0008150 biological_process No
GO:0044238 primary metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 67 85 18
3 146 168 22
4 183 200 17
5 221 243 22
6 253 270 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|7111
MTTTPSPSLCCQTIFLAISAALLAAHLLPPPLRHRLLQYGARGAEPLAGHDAPKLLSSIVNLQVPHAWFWHFYLG
SFIWSLVWAWQYRGRGALMGGLARAQLASSDASSVDLGRVYLAWAMMAAQGSRRLLECLFVMRPGKSSMSWAHWL
MGLGHYALVNLSIWIHGSDGILESWTGSQPVVLLTLRNSLGLAVYLAAWLEQNRCHRHLASLPKYTLPSEGLFRL
FVCPHYTCECVIYLALAFVAAPPDRLFNPSLLCIFVFVVTNLGTTARNTEKWYGQKFGRDKLAGRWKMIPFVF*
Coding >Ophun1|7111
ATGACCACAACCCCGTCACCCTCCCTCTGCTGCCAGACCATCTTCCTCGCCATCTCAGCAGCCCTCCTAGCCGCT
CACCTCCTCCCGCCCCCCCTCCGCCACCGGCTCCTCCAGTACGGCGCCCGCGGAGCCGAGCCACTCGCAGGCCAT
GACGCGCCCAAGCTGCTGTCCTCCATCGTCAACCTACAGGTTCCGCACGCCTGGTTCTGGCACTTTTACCTGGGC
TCTTTCATCTGGTCCCTTGTCTGGGCTTGGCAGTATCGAGGTCGAGGGGCTTTGATGGGGGGGCTGGCGAGGGCG
CAGCTTGCTTCTTCGGATGCTTCTTCGGTGGACTTGGGGCGCGTGTATCTTGCCTGGGCTATGATGGCTGCTCAG
GGCTCTAGACGGCTGCTCGAATGCCTCTTCGTCATGCGGCCGGGCAAATCGTCCATGTCGTGGGCTCACTGGCTT
ATGGGACTGGGTCATTACGCTCTCGTCAACCTGTCCATCTGGATACATGGCTCAGACGGCATTCTCGAATCCTGG
ACCGGATCGCAACCTGTCGTCCTGCTCACGCTGCGAAACTCGTTGGGCCTGGCCGTCTATCTGGCCGCCTGGCTG
GAACAAAACAGATGCCATCGTCACCTCGCCAGTCTTCCCAAGTACACGCTTCCCAGCGAGGGCCTGTTCCGTCTC
TTCGTCTGCCCTCATTACACGTGCGAGTGTGTCATCTATCTGGCCCTCGCCTTCGTTGCTGCTCCTCCCGACCGC
CTCTTCAACCCGAGCCTGCTCTGCATCTTCGTCTTTGTCGTTACGAATCTCGGCACTACGGCTCGGAACACGGAG
AAGTGGTATGGGCAAAAGTTCGGACGAGATAAACTGGCTGGCCGGTGGAAGATGATTCCCTTTGTCTTTTAG
Transcript >Ophun1|7111
ATGACCACAACCCCGTCACCCTCCCTCTGCTGCCAGACCATCTTCCTCGCCATCTCAGCAGCCCTCCTAGCCGCT
CACCTCCTCCCGCCCCCCCTCCGCCACCGGCTCCTCCAGTACGGCGCCCGCGGAGCCGAGCCACTCGCAGGCCAT
GACGCGCCCAAGCTGCTGTCCTCCATCGTCAACCTACAGGTTCCGCACGCCTGGTTCTGGCACTTTTACCTGGGC
TCTTTCATCTGGTCCCTTGTCTGGGCTTGGCAGTATCGAGGTCGAGGGGCTTTGATGGGGGGGCTGGCGAGGGCG
CAGCTTGCTTCTTCGGATGCTTCTTCGGTGGACTTGGGGCGCGTGTATCTTGCCTGGGCTATGATGGCTGCTCAG
GGCTCTAGACGGCTGCTCGAATGCCTCTTCGTCATGCGGCCGGGCAAATCGTCCATGTCGTGGGCTCACTGGCTT
ATGGGACTGGGTCATTACGCTCTCGTCAACCTGTCCATCTGGATACATGGCTCAGACGGCATTCTCGAATCCTGG
ACCGGATCGCAACCTGTCGTCCTGCTCACGCTGCGAAACTCGTTGGGCCTGGCCGTCTATCTGGCCGCCTGGCTG
GAACAAAACAGATGCCATCGTCACCTCGCCAGTCTTCCCAAGTACACGCTTCCCAGCGAGGGCCTGTTCCGTCTC
TTCGTCTGCCCTCATTACACGTGCGAGTGTGTCATCTATCTGGCCCTCGCCTTCGTTGCTGCTCCTCCCGACCGC
CTCTTCAACCCGAGCCTGCTCTGCATCTTCGTCTTTGTCGTTACGAATCTCGGCACTACGGCTCGGAACACGGAG
AAGTGGTATGGGCAAAAGTTCGGACGAGATAAACTGGCTGGCCGGTGGAAGATGATTCCCTTTGTCTTTTAG
Gene >Ophun1|7111
ATGACCACAACCCCGTCACCCTCCCTCTGCTGCCAGACCATCTTCCTCGCCATCTCAGCAGCCCTCCTAGCCGCT
CACCTCCTCCCGCCCCCCCTCCGCCACCGGCTCCTCCAGTACGGCGCCCGCGGAGCCGAGCCACTCGCAGGCCAT
GACGCGCCCAAGCTGCTGTCCTCCATCGTCAACCTACAGGTTCCGCACGCCTGGTTCTGGCACTTTTACCTGGGC
TCTTTCATCTGGTCCCTTGTCTGGGCTTGGCAGTATCGAGGTCGAGGGGCTTTGATGGGGGGGCTGGCGAGGGCG
CAGCTTGCTTCTTCGGATGCTTCTTCGGTGGACTTGGGGCGCGTGTATCTTGCCTGGGCTATGATGGCTGCTCAG
GGCTCTAGACGGCTGCTCGAATGCCTCTTCGTCATGCGGCCGGGCAAATCGTCCATGTCGTGGGCTCACTGGCTT
ATGGGACTGGGTCATTACGCTCTCGTCAACCTGTCCATCTGGATACATGGCTCAGGTCTGTTGACTCGCCTCTCA
TCTCTTAACCCAGCTAACACTCCTGACAAGACGGCATTCTCGAATCCTGGACCGGATCGCAACCTGTCGTCCTGC
TCACGCTGCGAAACTCGTTGGGCCTGGCCGTCTATCTGGCCGCCTGGCTGGAACAAAACAGATGCCATCGTCACC
TCGCCAGTCTTCCCAAGTACACGCTTCCCAGCGAGGGCCTGTTCCGTCTCTTCGTCTGCCCTCATTACACGTGCG
AGTGTGTCATCTATCTGGCCCTCGCCTTCGTTGCTGCTCCTCCCGACCGCCTCTTCAACCCGAGCCTGCTCTGCA
TCTTCGTCTTTGTCGTTACGAATCTCGGCACTACGGCTCGGAACACGGAGAAGTGGTATGGGCAAAAGTTCGGAC
GAGATAAACTGGCTGGCCGGTGGAAGATGATTCCCTTTGTCTTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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