© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|7078 |
| Gene name | |
| Location | Contig_84:26649..28839 |
| Strand | - |
| Gene length (bp) | 2190 |
| Transcript length (bp) | 1590 |
| Coding sequence length (bp) | 1590 |
| Protein length (aa) | 530 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02798 | GST_N | Glutathione S-transferase, N-terminal domain | 2.5E-12 | 405 | 467 |
| PF06500 | FrsA-like | Esterase FrsA-like | 9.5E-10 | 55 | 263 |
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 1.7E-07 | 175 | 328 |
| PF13417 | GST_N_3 | Glutathione S-transferase, N-terminal domain | 5.2E-06 | 410 | 467 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P26642|EF1GA_XENLA | Elongation factor 1-gamma-A OS=Xenopus laevis GN=eef1g-a PE=1 SV=1 | 406 | 525 | 4.0E-19 |
| sp|Q91375|EF1GB_XENLA | Elongation factor 1-gamma-B OS=Xenopus laevis GN=eef1g-b PE=2 SV=1 | 406 | 522 | 8.0E-18 |
| sp|Q29387|EF1G_PIG | Elongation factor 1-gamma (Fragment) OS=Sus scrofa GN=EEF1G PE=2 SV=2 | 407 | 522 | 2.0E-17 |
| sp|P26641|EF1G_HUMAN | Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3 | 407 | 525 | 3.0E-16 |
| sp|A2Q127|EF1G_HORSE | Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1 | 407 | 525 | 3.0E-16 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P26642|EF1GA_XENLA | Elongation factor 1-gamma-A OS=Xenopus laevis GN=eef1g-a PE=1 SV=1 | 406 | 525 | 4.0E-19 |
| sp|Q91375|EF1GB_XENLA | Elongation factor 1-gamma-B OS=Xenopus laevis GN=eef1g-b PE=2 SV=1 | 406 | 522 | 8.0E-18 |
| sp|Q29387|EF1G_PIG | Elongation factor 1-gamma (Fragment) OS=Sus scrofa GN=EEF1G PE=2 SV=2 | 407 | 522 | 2.0E-17 |
| sp|P26641|EF1G_HUMAN | Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3 | 407 | 525 | 3.0E-16 |
| sp|A2Q127|EF1G_HORSE | Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1 | 407 | 525 | 3.0E-16 |
| sp|Q4R7H5|EF1G_MACFA | Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1 | 407 | 525 | 4.0E-16 |
| sp|Q3SZV3|EF1G_BOVIN | Elongation factor 1-gamma OS=Bos taurus GN=EEF1G PE=2 SV=1 | 407 | 525 | 4.0E-16 |
| sp|Q68FR6|EF1G_RAT | Elongation factor 1-gamma OS=Rattus norvegicus GN=Eef1g PE=2 SV=3 | 407 | 522 | 6.0E-16 |
| sp|P12261|EF1G_ARTSA | Elongation factor 1-gamma OS=Artemia salina PE=1 SV=3 | 407 | 522 | 7.0E-16 |
| sp|Q9D8N0|EF1G_MOUSE | Elongation factor 1-gamma OS=Mus musculus GN=Eef1g PE=1 SV=3 | 407 | 522 | 8.0E-16 |
| sp|P29694|EF1G_RABIT | Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3 | 407 | 522 | 9.0E-16 |
| sp|Q90YC0|EF1G_CARAU | Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1 | 407 | 522 | 1.0E-15 |
| sp|Q6PE25|EF1G_DANRE | Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1 | 407 | 522 | 2.0E-15 |
| sp|Q9NJH0|EF1G_DROME | Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=2 SV=2 | 406 | 511 | 1.0E-12 |
| sp|Q9FVT2|EF1G2_ARATH | Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1 | 406 | 525 | 1.0E-12 |
| sp|Q9ZRI7|EF1G1_ORYSJ | Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1 | 407 | 525 | 6.0E-12 |
| sp|O04487|EF1G1_ARATH | Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1 | 406 | 524 | 1.0E-11 |
| sp|Q6YW46|EF1G2_ORYSJ | Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2 | 407 | 525 | 2.0E-11 |
| sp|Q9FUM1|EF1G_PRUAV | Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1 | 407 | 525 | 4.0E-11 |
| sp|P40921|EF1G_SCHPO | Elongation factor 1-gamma OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tef3 PE=1 SV=1 | 390 | 509 | 4.0E-11 |
| sp|Q5Z627|EF1G3_ORYSJ | Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1 | 407 | 525 | 2.0E-10 |
| sp|Q93NG6|DHPON_ARTNI | 2,6-dihydropseudooxynicotine hydrolase OS=Arthrobacter nicotinovorans PE=1 SV=1 | 154 | 266 | 3.0E-08 |
| sp|Q00717|STCT_EMENI | Putative sterigmatocystin biosynthesis protein stcT OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcT PE=4 SV=1 | 408 | 517 | 8.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006749 | glutathione metabolic process | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0006790 | sulfur compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0006518 | peptide metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0043603 | cellular amide metabolic process | No |
| GO:0006575 | cellular modified amino acid metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0005488 | binding | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| Gene cluster ID | Type of secondary metabolism gene |
|---|---|
| Cluster 29 | Decorating |
| Orthofinder run ID | 4 |
| Orthogroup | 705 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|7078 MRQVFSSALFDFEFLRVLGAAPYHGAEVGECLEAASWIKDGDAEGWYRAWLDMGRRALALGEEAQARNDRTAACW AYLRASNYFRASEFFLHCTPDDDRILASAQESVDAFDKGWVLLDATVRSVIIPIGQHQKLPGRLYLPAAHQRLGA DKLPVILQTGGFDSTQEELYYYGAAGALPRGYAVLSFDGPGQGLPLRRDKLRMRHDWEIITTKVIDYLARELAPE HGLDMNRLAIYGASLGGYLALRGAADARIKACVSVDGPYDLFQVAHSRMPAWFINGWLSGWLSDGFFNVIVDVLA ATNFQLRWEFGHSKWVFGVDSPAQVMRAMQRFSLDDGKTQYLSRLRCPTLVTGPADSFYFTPAQNAEKIFDGLSQ LGPTEKELWIGRGKSCGGLQAKIGSLALLHHKILAAAKLNGLELEIADYQHNITNHTPDFLAKFPVGKAPVFEGS DGLCLSESDAIAQYVAQSGPRASQLLGHNASSSAQIRQWISFTDSELTPHVLHLVLWRVGLGVFNAEVETRALAG DYWC* |
| Coding | >Ophun1|7078 ATGCGCCAAGTGTTTTCCTCGGCCCTCTTCGACTTTGAATTTCTCCGCGTCCTCGGAGCGGCCCCGTATCACGGC GCCGAGGTCGGCGAGTGCCTGGAAGCAGCATCATGGATCAAGGATGGCGATGCCGAGGGCTGGTACCGCGCCTGG CTTGACATGGGCCGTAGGGCTTTGGCATTGGGGGAGGAGGCCCAGGCTCGCAACGACAGGACGGCTGCGTGCTGG GCGTACCTCCGAGCATCCAACTACTTCCGGGCCAGCGAGTTCTTTCTGCACTGCACGCCCGACGACGATCGTATC CTGGCCTCAGCTCAGGAGAGTGTCGATGCCTTTGACAAGGGCTGGGTCTTGTTAGACGCGACGGTGCGCAGCGTC ATCATCCCCATCGGACAGCATCAGAAGTTGCCAGGCCGACTTTACCTCCCAGCTGCTCACCAGAGGCTTGGGGCC GACAAGCTGCCCGTTATTCTTCAGACGGGAGGATTCGACTCGACGCAGGAAGAGTTGTATTACTACGGTGCAGCC GGAGCCCTTCCGCGCGGGTACGCCGTCCTCAGCTTCGACGGGCCGGGCCAGGGGCTGCCGCTCCGGAGGGACAAG CTTCGTATGAGGCACGATTGGGAGATCATCACGACCAAGGTGATTGACTATCTGGCCCGCGAGCTGGCGCCGGAA CACGGGCTCGATATGAACCGGCTCGCCATCTATGGCGCATCTCTCGGTGGCTATCTGGCCCTGCGAGGGGCGGCG GACGCGCGTATCAAAGCGTGTGTTTCAGTTGACGGGCCATATGATCTCTTCCAGGTAGCTCACAGCCGCATGCCA GCTTGGTTCATCAACGGATGGCTCAGCGGCTGGTTGAGTGACGGCTTCTTCAACGTGATCGTCGACGTTCTCGCG GCAACCAACTTCCAGCTGCGATGGGAGTTTGGACACAGCAAATGGGTCTTTGGCGTCGACTCGCCAGCTCAAGTG ATGCGAGCCATGCAGCGCTTCTCTCTCGACGACGGCAAGACGCAGTATCTGTCGAGGCTTCGATGTCCGACGCTC GTCACCGGTCCAGCCGACTCATTCTACTTCACTCCAGCCCAGAACGCCGAGAAGATCTTTGACGGCCTCAGCCAG CTCGGACCTACGGAAAAGGAGCTATGGATCGGTAGAGGGAAATCATGCGGGGGCTTGCAAGCAAAGATTGGCTCC CTGGCGCTCCTACATCATAAGATCCTCGCCGCGGCCAAGCTCAACGGCCTCGAACTAGAAATAGCCGACTACCAA CACAACATCACCAACCACACGCCCGACTTTCTCGCCAAGTTCCCCGTCGGCAAGGCCCCCGTCTTCGAAGGCTCC GACGGCCTCTGCCTCTCCGAATCAGACGCCATCGCCCAGTACGTAGCCCAATCCGGCCCACGAGCATCCCAACTC CTAGGCCACAACGCATCCAGCAGCGCGCAAATCCGGCAATGGATCTCCTTCACGGACAGCGAGCTAACGCCCCAC GTTCTCCATCTCGTGCTGTGGCGCGTGGGGCTGGGCGTCTTCAACGCAGAGGTCGAGACGCGGGCTTTGGCTGGG GACTATTGGTGTTGA |
| Transcript | >Ophun1|7078 ATGCGCCAAGTGTTTTCCTCGGCCCTCTTCGACTTTGAATTTCTCCGCGTCCTCGGAGCGGCCCCGTATCACGGC GCCGAGGTCGGCGAGTGCCTGGAAGCAGCATCATGGATCAAGGATGGCGATGCCGAGGGCTGGTACCGCGCCTGG CTTGACATGGGCCGTAGGGCTTTGGCATTGGGGGAGGAGGCCCAGGCTCGCAACGACAGGACGGCTGCGTGCTGG GCGTACCTCCGAGCATCCAACTACTTCCGGGCCAGCGAGTTCTTTCTGCACTGCACGCCCGACGACGATCGTATC CTGGCCTCAGCTCAGGAGAGTGTCGATGCCTTTGACAAGGGCTGGGTCTTGTTAGACGCGACGGTGCGCAGCGTC ATCATCCCCATCGGACAGCATCAGAAGTTGCCAGGCCGACTTTACCTCCCAGCTGCTCACCAGAGGCTTGGGGCC GACAAGCTGCCCGTTATTCTTCAGACGGGAGGATTCGACTCGACGCAGGAAGAGTTGTATTACTACGGTGCAGCC GGAGCCCTTCCGCGCGGGTACGCCGTCCTCAGCTTCGACGGGCCGGGCCAGGGGCTGCCGCTCCGGAGGGACAAG CTTCGTATGAGGCACGATTGGGAGATCATCACGACCAAGGTGATTGACTATCTGGCCCGCGAGCTGGCGCCGGAA CACGGGCTCGATATGAACCGGCTCGCCATCTATGGCGCATCTCTCGGTGGCTATCTGGCCCTGCGAGGGGCGGCG GACGCGCGTATCAAAGCGTGTGTTTCAGTTGACGGGCCATATGATCTCTTCCAGGTAGCTCACAGCCGCATGCCA GCTTGGTTCATCAACGGATGGCTCAGCGGCTGGTTGAGTGACGGCTTCTTCAACGTGATCGTCGACGTTCTCGCG GCAACCAACTTCCAGCTGCGATGGGAGTTTGGACACAGCAAATGGGTCTTTGGCGTCGACTCGCCAGCTCAAGTG ATGCGAGCCATGCAGCGCTTCTCTCTCGACGACGGCAAGACGCAGTATCTGTCGAGGCTTCGATGTCCGACGCTC GTCACCGGTCCAGCCGACTCATTCTACTTCACTCCAGCCCAGAACGCCGAGAAGATCTTTGACGGCCTCAGCCAG CTCGGACCTACGGAAAAGGAGCTATGGATCGGTAGAGGGAAATCATGCGGGGGCTTGCAAGCAAAGATTGGCTCC CTGGCGCTCCTACATCATAAGATCCTCGCCGCGGCCAAGCTCAACGGCCTCGAACTAGAAATAGCCGACTACCAA CACAACATCACCAACCACACGCCCGACTTTCTCGCCAAGTTCCCCGTCGGCAAGGCCCCCGTCTTCGAAGGCTCC GACGGCCTCTGCCTCTCCGAATCAGACGCCATCGCCCAGTACGTAGCCCAATCCGGCCCACGAGCATCCCAACTC CTAGGCCACAACGCATCCAGCAGCGCGCAAATCCGGCAATGGATCTCCTTCACGGACAGCGAGCTAACGCCCCAC GTTCTCCATCTCGTGCTGTGGCGCGTGGGGCTGGGCGTCTTCAACGCAGAGGTCGAGACGCGGGCTTTGGCTGGG GACTATTGGTGTTGA |
| Gene | >Ophun1|7078 ATGCGCCAAGTGTTTTCCTCGGCCCTCTTCGACTTTGAATTTCTCCGCGTCCTCGGAGCGGCCCCGTATCACGGC GCCGAGGTCGGCGAGTGCCTGGAAGCAGCATCATGGATCAAGGATGGCGATGCCGAGGGCTGGTACCGCGCCTGG CTTGACATGGGCCGTAGGGCTTTGGCATTGGGGGAGGAGGCCCAGGCTCGCAACGACAGGACGGCTGCGTGCTGG GCGTACCTCCGAGCATCCAACTACTTCCGGGCCAGCGAGTTCTTTCTGCACTGCACGCCCGACGACGATCGTATC CTGGCCTCAGCTCAGGAGAGTGTCGATGCCTTTGACAAGGGCTGGGTCTTGTTAGACGCGACGGTGCGCAGCGTC ATCATCCCCATCGGACAGCATCAGAAGTTGCCAGGCCGACTTTACCTCCCAGCTGCTCACCAGAGGCTTGGGGCC GACAAGCTGCCCGTTATTCTTCAGACGGGAGGATTCGACTCGACGCAGGAAGAGTTGTATTACTACGGTGCAGCC GGAGCCCTTCCGCGCGGGTACGCCGTCCTCAGCTTCGACGGGCCGGGCCAGGGGCTGCCGCTCCGGAGGGACAAG CTTCGTATGAGGCACGATTGGGAGATCATCACGACCAAGGTGATTGACTATCTGGCCCGCGAGCTGGCGCCGGAA CACGGGCTCGATATGAACCGGCTCGCCATCTATGGCGCATCTCTCGGTGGCTATCTGGCCCTGCGAGGGGCGGCG GACGCGCGTATCAAAGCGTGTGTTTCAGTTGACGGGCCATATGATCTCTTCCAGGTAGCTCACAGCCGCATGCCA GCTTGGTTCATCAACGGATGGCTCAGCGGCTGGTTGAGTGACGGCTTCTTCAACGTGATCGTCGACGTTCTCGCG GCAACCAACTTCCAGCTGCGATGGGAGTTTGGACACAGCAAATGGGTCTTTGGCGTCGACTCGCCAGCTCAAGTG ATGCGAGCCATGCAGCGCTTCTCTCTCGACGACGGCAAGACGCAGTATCTGTCGAGGCTTCGATGTCCGACGCTC GTCACCGGTCCAGCCGACTCATTCTACTTCACTCCAGCCCAGAACGCCGAGAAGATCTTTGACGGCCTCAGCCAG CTCGGACCTACGGAAAAGGAGCTATGGATCGGTAGAGGGAAATCATGCGGGGGCTTGCAAGCAAAGATTGGCTCC CTGGCGCTCCTACATCATAAGGTCTTTTCCTGGCTGGACGATCAGTTTGGCATCCAGCGAGCGGGTGAAGACGGA TGCCGAGGGGGTAGTTATTGAGTCTCGGTCAATAGTCAGGAACAGTGGTTCGTTTCGTGCTTGGCGCCACGGCTG GCTGGGGATGGAACTCGCCGAAAATGGCTTCATCGCTCAGACAAGTTGTGAAGTTGTGGAATGATTATAGATTTA TACAATCTGGTTGTCAGCATCTCCTTTGACTTCAATTGCTTTCCTCGAGCCCTGATATGTTGTCAGTCCGTTGTT CGTCCGTGTCGTCTCTCACCCAGGATGTTTGGCAAGGTCTATTCCTTCATGCCAAATGGAAGGGTGTTTAAAGTA AAGCCCGCTGACGAGAATCCTTCCAACTCTCTTCAACGTCGAAGACGATCGAACTAACACCCCTTCACAGATCCT CGCCGCGGCCAAGCTCAACGGCCTCGAACTAGAAATAGCCGACTACCAACACAACATCACCAACCACACGCCCGA CTTTCTCGCCAAGTTCCCCGTCGGCAAGGCCCCCGTCTTCGAAGGCTCCGACGGCCTCTGCCTCTCCGAATCAGA CGCCATCGCCCAGTACGTAGCCCAATCCGGCCCACGAGCATCCCAACTCCTAGGCCACAACGCATCCAGCAGCGC GCAAATCCGGCAATGGATCTCCTTCACGGACAGCGAGCTAACGCCCCACGTTCTCCATCTCGTGCTGTGGCGCGT GGGGCTGGGCGTCTTCAACGCAGAGGTCGAGACGCGGGCTTTGGCTGGGGTTGAGAAGGGGCTGGCTGTGTTGGA GGGGCGTTTGCGTGGCCGGACTTGGTTGGTGGGTGAGGAGGTGAGTCTTGCTGATTTGACGGTTGCTTCTGCGCT GGTTTGGGCGTTTCGACATGTTGTTGATGGGAGGATGAGGGGGGGGTTTCCGGGTGTTTGTGCTTGGTATCTTAG GACTATTGGTGTTGA |