Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|7048
Gene name
LocationContig_834:24..1502
Strand-
Gene length (bp)1478
Transcript length (bp)1137
Coding sequence length (bp)1137
Protein length (aa) 379

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17292 POB3_N POB3-like N-terminal PH domain 2.7E-29 6 97
PF03531 SSrecog Structure-specific recognition protein (SSRP1) 3.1E-29 104 190

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q7RWW0|POB3_NEUCR FACT complex subunit ctc-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ctc-1 PE=3 SV=1 1 373 0.0E+00
sp|Q4IJU0|POB3_GIBZE FACT complex subunit POB3 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=POB3 PE=3 SV=1 1 373 0.0E+00
sp|Q2USL9|POB3_ASPOR FACT complex subunit pob3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=pob3 PE=3 SV=1 4 376 0.0E+00
sp|Q5AYE3|POB3_EMENI FACT complex subunit pob3 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pob3 PE=3 SV=2 4 376 0.0E+00
sp|Q4WGK6|POB3_ASPFU FACT complex subunit pob3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pob3 PE=3 SV=2 1 376 0.0E+00
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Swissprot ID Swissprot Description Start End E-value
sp|Q7RWW0|POB3_NEUCR FACT complex subunit ctc-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ctc-1 PE=3 SV=1 1 373 0.0E+00
sp|Q4IJU0|POB3_GIBZE FACT complex subunit POB3 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=POB3 PE=3 SV=1 1 373 0.0E+00
sp|Q2USL9|POB3_ASPOR FACT complex subunit pob3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=pob3 PE=3 SV=1 4 376 0.0E+00
sp|Q5AYE3|POB3_EMENI FACT complex subunit pob3 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pob3 PE=3 SV=2 4 376 0.0E+00
sp|Q4WGK6|POB3_ASPFU FACT complex subunit pob3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pob3 PE=3 SV=2 1 376 0.0E+00
sp|O94529|POB3_SCHPO FACT complex subunit pob3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pob3 PE=3 SV=1 7 376 4.0E-125
sp|Q5ALL8|POB3_CANAL FACT complex subunit POB3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=POB3 PE=3 SV=1 7 367 1.0E-117
sp|Q6BS60|POB3_DEBHA FACT complex subunit POB3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=POB3 PE=3 SV=1 7 367 9.0E-116
sp|Q6C7V4|POB3_YARLI FACT complex subunit POB3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=POB3 PE=3 SV=1 7 376 8.0E-112
sp|Q04636|POB3_YEAST FACT complex subunit POB3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=POB3 PE=1 SV=1 7 369 4.0E-107
sp|Q756X6|POB3_ASHGO FACT complex subunit POB3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=POB3 PE=3 SV=1 7 369 9.0E-107
sp|Q6CWD7|POB3_KLULA FACT complex subunit POB3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=POB3 PE=3 SV=1 7 369 3.0E-106
sp|Q6FKI2|POB3_CANGA FACT complex subunit POB3 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=POB3 PE=3 SV=1 7 369 1.0E-101
sp|Q4P647|POB3_USTMA FACT complex subunit POB3 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=POB3 PE=3 SV=1 1 376 1.0E-100
sp|P0CR74|POB3_CRYNJ FACT complex subunit POB3 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=POB3 PE=3 SV=1 6 367 7.0E-83
sp|P0CR75|POB3_CRYNB FACT complex subunit POB3 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=POB3 PE=3 SV=1 6 367 7.0E-83
sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1 OS=Vicia faba GN=SSRP1 PE=2 SV=1 19 368 2.0E-61
sp|Q9W602|SSRP1_XENLA FACT complex subunit SSRP1 OS=Xenopus laevis GN=ssrp1 PE=1 SV=1 7 367 4.0E-60
sp|Q04678|SSRP1_CHICK FACT complex subunit SSRP1 OS=Gallus gallus GN=SSRP1 PE=2 SV=2 7 367 2.0E-59
sp|Q08945|SSRP1_HUMAN FACT complex subunit SSRP1 OS=Homo sapiens GN=SSRP1 PE=1 SV=1 1 367 3.0E-59
sp|Q08943|SSRP1_MOUSE FACT complex subunit SSRP1 OS=Mus musculus GN=Ssrp1 PE=1 SV=2 1 367 6.0E-59
sp|Q04931|SSRP1_RAT FACT complex subunit SSRP1 OS=Rattus norvegicus GN=Ssrp1 PE=1 SV=2 1 367 8.0E-59
sp|Q05153|SSRP1_ARATH FACT complex subunit SSRP1 OS=Arabidopsis thaliana GN=SSRP1 PE=1 SV=2 6 369 3.0E-58
sp|Q65WY8|SSP1B_ORYSJ FACT complex subunit SSRP1-B OS=Oryza sativa subsp. japonica GN=SSRP1-B PE=2 SV=1 19 368 7.0E-55
sp|Q293F6|SSRP1_DROPS FACT complex subunit Ssrp1 OS=Drosophila pseudoobscura pseudoobscura GN=Ssrp PE=3 SV=2 18 376 4.0E-54
sp|Q9LEF5|SSRP1_MAIZE FACT complex subunit SSRP1 OS=Zea mays GN=SSRP1 PE=1 SV=1 19 368 1.0E-53
sp|Q4H2R2|SSRP1_CIOIN FACT complex subunit SSRP1 OS=Ciona intestinalis GN=SSRP1 PE=2 SV=1 19 367 3.0E-53
sp|Q39601|SSRP1_CATRO FACT complex subunit SSRP1 OS=Catharanthus roseus GN=SSRP1 PE=2 SV=1 19 369 3.0E-53
sp|Q05344|SSRP1_DROME FACT complex subunit Ssrp1 OS=Drosophila melanogaster GN=Ssrp PE=1 SV=2 18 376 3.0E-53
sp|Q9LGR0|SSP1A_ORYSJ FACT complex subunit SSRP1-A OS=Oryza sativa subsp. japonica GN=SSRP1-A PE=2 SV=1 19 368 7.0E-52
sp|P41848|SSP1A_CAEEL FACT complex subunit SSRP1-A OS=Caenorhabditis elegans GN=hmg-4 PE=3 SV=1 7 378 2.0E-45
sp|Q54G78|SSRP1_DICDI FACT complex subunit SSRP1 OS=Dictyostelium discoideum GN=ssrp1 PE=3 SV=1 4 367 5.0E-43
sp|O01683|SSP1B_CAEEL FACT complex subunit ssrp1-B OS=Caenorhabditis elegans GN=hmg-3 PE=3 SV=1 1 378 1.0E-40
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GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1814
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5815
Ophiocordyceps australis map64 (Brazil) OphauB2|7150
Ophiocordyceps camponoti-floridani Ophcf2|06027
Ophiocordyceps camponoti-rufipedis Ophun1|7048 (this protein)
Ophiocordyceps kimflemingae Ophio5|7745
Ophiocordyceps subramaniannii Hirsu2|1786

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|7048
MTAIESFDGIYLDLSKESGKCRFAETGFGWKPAGGGETFTLDRSNVGGAQWSRAAKGYEVRILHRNSGIIQLDGF
QQADLERLTKVFKNWYSTVLENKEHALRGWNWGKADFSKAELTFNVQNKPALELPYSEIANTNLAGRNEVAIELS
LPQDANDTGTAGQGGARGKGKKAGAGRDQLVEMRFYIPGTAAKKEKEAADGDEGGSDDAVEEQNAATLFYETLIE
KAEIGEMAGDTIASFLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYDAIKKFMVLPKPDDMHCMLCIGLDPP
LRQGQTRYPFVVMQFKKDEEVTIDLNIDESDLHSKYKDKLDAHYEEPLHHVVAKIFRGLGNKKISSPAKDFITLQ
GWP*
Coding >Ophun1|7048
ATGACCGCCATCGAGAGCTTCGACGGCATCTACCTCGACCTCTCAAAAGAGAGCGGAAAATGCCGCTTCGCAGAG
ACCGGCTTCGGCTGGAAACCCGCAGGCGGCGGCGAAACCTTCACCCTCGACCGCTCCAACGTCGGCGGCGCGCAA
TGGAGCCGCGCAGCAAAAGGCTACGAAGTCCGCATCCTGCACCGCAACTCGGGCATCATCCAGCTCGACGGCTTC
CAGCAAGCCGACCTCGAACGCCTCACCAAAGTCTTCAAGAACTGGTACAGCACCGTGCTCGAGAACAAGGAGCAC
GCCCTCCGCGGCTGGAACTGGGGAAAAGCAGACTTCTCAAAGGCGGAACTCACCTTCAACGTCCAGAACAAACCC
GCCCTCGAACTGCCCTACTCGGAGATTGCAAACACCAACCTCGCAGGGCGTAACGAGGTGGCCATTGAGCTTTCG
CTCCCGCAGGATGCGAACGATACCGGCACGGCTGGACAGGGCGGCGCTCGTGGCAAGGGCAAAAAGGCTGGTGCT
GGGAGGGACCAGCTCGTCGAGATGCGCTTCTACATCCCCGGAACGGCCGCCAAGAAGGAGAAGGAGGCGGCCGAT
GGCGATGAAGGCGGCAGCGACGACGCCGTCGAAGAGCAAAACGCCGCAACCCTCTTCTACGAGACGCTCATTGAA
AAGGCCGAGATTGGCGAGATGGCCGGAGACACCATTGCTAGTTTCCTTGATGTCCTCCATCTCACCCCGAGAGGC
CGCTTCGACATCGACATGTACGAAGCCTCATTCCGTCTCCGCGGCAAAACCTACGACTACAAGATCCAATACGAC
GCCATCAAGAAATTCATGGTCCTCCCCAAACCAGACGACATGCACTGCATGCTCTGCATCGGCCTCGATCCCCCC
CTCCGCCAAGGCCAAACCCGCTACCCCTTTGTCGTGATGCAGTTCAAAAAGGACGAAGAAGTCACCATCGACCTC
AACATCGACGAGTCGGACCTCCACTCCAAATACAAGGACAAGCTCGACGCCCACTACGAAGAACCCCTGCACCAC
GTCGTCGCCAAGATCTTCCGCGGCCTGGGAAACAAGAAGATTTCCTCTCCCGCCAAAGACTTTATCACTCTCCAG
GGGTGGCCGTAG
Transcript >Ophun1|7048
ATGACCGCCATCGAGAGCTTCGACGGCATCTACCTCGACCTCTCAAAAGAGAGCGGAAAATGCCGCTTCGCAGAG
ACCGGCTTCGGCTGGAAACCCGCAGGCGGCGGCGAAACCTTCACCCTCGACCGCTCCAACGTCGGCGGCGCGCAA
TGGAGCCGCGCAGCAAAAGGCTACGAAGTCCGCATCCTGCACCGCAACTCGGGCATCATCCAGCTCGACGGCTTC
CAGCAAGCCGACCTCGAACGCCTCACCAAAGTCTTCAAGAACTGGTACAGCACCGTGCTCGAGAACAAGGAGCAC
GCCCTCCGCGGCTGGAACTGGGGAAAAGCAGACTTCTCAAAGGCGGAACTCACCTTCAACGTCCAGAACAAACCC
GCCCTCGAACTGCCCTACTCGGAGATTGCAAACACCAACCTCGCAGGGCGTAACGAGGTGGCCATTGAGCTTTCG
CTCCCGCAGGATGCGAACGATACCGGCACGGCTGGACAGGGCGGCGCTCGTGGCAAGGGCAAAAAGGCTGGTGCT
GGGAGGGACCAGCTCGTCGAGATGCGCTTCTACATCCCCGGAACGGCCGCCAAGAAGGAGAAGGAGGCGGCCGAT
GGCGATGAAGGCGGCAGCGACGACGCCGTCGAAGAGCAAAACGCCGCAACCCTCTTCTACGAGACGCTCATTGAA
AAGGCCGAGATTGGCGAGATGGCCGGAGACACCATTGCTAGTTTCCTTGATGTCCTCCATCTCACCCCGAGAGGC
CGCTTCGACATCGACATGTACGAAGCCTCATTCCGTCTCCGCGGCAAAACCTACGACTACAAGATCCAATACGAC
GCCATCAAGAAATTCATGGTCCTCCCCAAACCAGACGACATGCACTGCATGCTCTGCATCGGCCTCGATCCCCCC
CTCCGCCAAGGCCAAACCCGCTACCCCTTTGTCGTGATGCAGTTCAAAAAGGACGAAGAAGTCACCATCGACCTC
AACATCGACGAGTCGGACCTCCACTCCAAATACAAGGACAAGCTCGACGCCCACTACGAAGAACCCCTGCACCAC
GTCGTCGCCAAGATCTTCCGCGGCCTGGGAAACAAGAAGATTTCCTCTCCCGCCAAAGACTTTATCACTCTCCAG
GGGTGGCCGTAG
Gene >Ophun1|7048
ATGACCGCCATGTAAGCGGCCTCATAGTCTCCTCTATCCCTGAAAGTGTCAAATGCTAATCATCCCCAGCGAGAG
CTTCGACGGCATCTACCTCGACCTCTCAAAAGAGAGCGGAAAATGCCGCTTCGCAGAGACCGGCTTCGGCTGGAA
ACCCGCAGGCGGCGGCGAAACCTTCACCCTCGACCGCTCCAACGTCGGCGGCGCGCAATGGAGCCGCGCAGCAAA
AGGCTACGAAGTCCGCATCCTGCACCGCAACTCGGGCATCATCCAGCTCGACGGCTTCCAGCAAGCCGACCTCGA
ACGCCTCACCAAAGTCTTCAAGAACTGGTACAGCACCGTGCTCGAGAACAAGGAGCACGCCCTCCGCGGCTGGAA
CTGGGGAAAAGCAGACTTCTCAAAGGCGGAACTCACCTTCAACGTCCAGAACAAACCCGCCCTCGAACTGCCCTA
CTCGGAGATTGCAAACACCAACCTCGCAGGGCGTAACGAGGTGGCCATTGAGCTTTCGCTCCCGCAGGATGCGAA
CGATACCGGCACGGCTGGACAGGGCGGCGCTCGTGGCAAGGGCAAAAAGGCTGGTGCTGGGAGGGACCAGCTCGT
CGAGATGCGCTTCTACATCCCCGGAACGGCCGCCAAGAAGGAGAAGGAGGCGGCCGATGGCGATGAAGGCGGCAG
CGACGACGCCGTCGAAGAGCAAAACGCCGCAACCCTCTTCTACGAGACGCTCATTGAAAAGGCCGAGATTGGCGA
GATGGCCGGAGACACCATTGCTAGTTTCCTTGATGTCCTCCATCTCACCCCGAGGTTCGCCCCCCAATCTCTTCT
TCCAGTCGTCCTTCACTCTTCACTAACAAAACACTCTTCCCCGCAGAGGCCGCTTCGACATCGACATGTACGAAG
CCTCATTCCGTCTCCGCGGCAAAACCTACGACTACAAGATCCAATACGACGCCATCAAGAAATTCATGGTCCTCC
CCAAACCAGACGACATGCACTGCATGCTCTGCATCGGCCTCGATCCCCCCCTCCGCCAAGGCCAAACCCGCTACC
CCTTTGTCGTGATGCAGTTCAAAAAGGACGAAGAAGTCACCATCGACCTCAACATCGACGAGTCGGACCTCCACT
CCAAATACAAGGACAAGCTCGACGCCCACTACGAAGAACCCCTGCACCACGTCGTCGCCAAGATCTTCCGCGGCC
TGGGAAACAAGAAGATTTCCTCTCCCGCCAAAGACTTTATCACGTACGCCCCCTTCCCCTTCTCCTCCACGTCAA
ACCCAACTAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCGCATCCAACACTCCCCCCACACACCACCAC
CGCCTCCCCTCCCTCCCCCCAAAAACCCTCCTGTTTCTACCCCCACCCCCCCACCCCCCACCCCCTCCCTTTTAC
ACACTTACTCCCACCCCCGACAAGGACAGTGTAGTCTCCAGGGGTGGCCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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