Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|7035
Gene name
LocationContig_83:30896..31778
Strand-
Gene length (bp)882
Transcript length (bp)831
Coding sequence length (bp)831
Protein length (aa) 277

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09769 ApoO Apolipoprotein O 6.5E-40 101 229

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P50087|MIC26_YEAST MICOS subunit MIC26 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MIC26 PE=1 SV=1 129 271 5.0E-12
sp|O94578|YQ75_SCHPO Uncharacterized protein C1442.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1442.05c PE=4 SV=1 161 270 7.0E-06

GO

GO Term Description Terminal node
GO:0042407 cristae formation Yes
GO:0061617 MICOS complex Yes
GO:0007006 mitochondrial membrane organization No
GO:0098796 membrane protein complex No
GO:0007007 inner mitochondrial membrane organization No
GO:0032991 protein-containing complex No
GO:0007005 mitochondrion organization No
GO:0098798 mitochondrial protein-containing complex No
GO:0016043 cellular component organization No
GO:0006996 organelle organization No
GO:0071840 cellular component organization or biogenesis No
GO:0009987 cellular process No
GO:0005575 cellular_component No
GO:0008150 biological_process No
GO:0098800 inner mitochondrial membrane protein complex No
GO:0061024 membrane organization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.45

Transmembrane Domains

Domain # Start End Length
1 165 182 17
2 189 211 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|7035
MAARVLLQRVSPPGTDTAFQTSRSRLTGSSQRSAASLALLGMALAPATVRAEQPMDKLAEQQFDKVRKPIYDDVH
LSPLTNPLATPIALPPSQPLLTDQDSRSSRPTPTDRLALQIGRARILLHRYAVAAEDKVNATMDTAFHLEQSFTD
TIASLAPPRGSGERLMPGAIYVVVAAMAGTIVTRNRNVLLRASVPLALGIGAGWAVLPITMRNVADLSWRYEQRF
PAVADAHVRLREELEKGVHYAKVHSEQGVRYVDERVTDARQAVEGWVKQGK*
Coding >Ophun1|7035
ATGGCTGCAAGAGTGCTACTGCAACGGGTCAGCCCCCCCGGAACTGATACTGCTTTCCAAACATCCCGATCACGG
CTGACGGGCAGCTCTCAGCGGTCCGCGGCGTCTCTGGCCTTGCTCGGGATGGCTCTGGCCCCGGCCACGGTCCGC
GCCGAGCAGCCGATGGACAAGCTGGCGGAGCAGCAGTTTGACAAGGTTAGGAAGCCCATCTACGACGATGTCCAT
CTCTCGCCTCTGACGAACCCCCTCGCAACGCCCATAGCCCTCCCACCCTCACAGCCACTCCTCACCGACCAAGAC
AGCCGCTCAAGCCGGCCTACGCCCACGGACCGACTGGCCCTTCAAATCGGCCGCGCCCGCATCCTCCTGCACCGC
TACGCCGTTGCAGCAGAAGACAAGGTCAACGCCACCATGGACACAGCCTTCCACCTAGAGCAATCCTTCACCGAC
ACCATCGCCTCGCTTGCGCCCCCGCGCGGCAGCGGCGAGCGCCTCATGCCCGGCGCCATCTACGTCGTCGTCGCC
GCCATGGCCGGCACCATCGTGACTCGCAACCGGAACGTGCTGCTGCGGGCTTCGGTGCCGTTGGCGCTGGGGATA
GGTGCCGGATGGGCCGTCTTGCCCATTACCATGCGCAACGTGGCGGATCTGTCGTGGCGGTACGAGCAGCGCTTT
CCGGCCGTGGCGGATGCTCATGTGCGGCTACGCGAGGAATTAGAGAAGGGGGTTCACTATGCCAAGGTGCATAGC
GAGCAGGGTGTACGATACGTTGATGAGAGGGTCACGGATGCGCGCCAGGCTGTCGAGGGTTGGGTTAAGCAGGGT
AAATAG
Transcript >Ophun1|7035
ATGGCTGCAAGAGTGCTACTGCAACGGGTCAGCCCCCCCGGAACTGATACTGCTTTCCAAACATCCCGATCACGG
CTGACGGGCAGCTCTCAGCGGTCCGCGGCGTCTCTGGCCTTGCTCGGGATGGCTCTGGCCCCGGCCACGGTCCGC
GCCGAGCAGCCGATGGACAAGCTGGCGGAGCAGCAGTTTGACAAGGTTAGGAAGCCCATCTACGACGATGTCCAT
CTCTCGCCTCTGACGAACCCCCTCGCAACGCCCATAGCCCTCCCACCCTCACAGCCACTCCTCACCGACCAAGAC
AGCCGCTCAAGCCGGCCTACGCCCACGGACCGACTGGCCCTTCAAATCGGCCGCGCCCGCATCCTCCTGCACCGC
TACGCCGTTGCAGCAGAAGACAAGGTCAACGCCACCATGGACACAGCCTTCCACCTAGAGCAATCCTTCACCGAC
ACCATCGCCTCGCTTGCGCCCCCGCGCGGCAGCGGCGAGCGCCTCATGCCCGGCGCCATCTACGTCGTCGTCGCC
GCCATGGCCGGCACCATCGTGACTCGCAACCGGAACGTGCTGCTGCGGGCTTCGGTGCCGTTGGCGCTGGGGATA
GGTGCCGGATGGGCCGTCTTGCCCATTACCATGCGCAACGTGGCGGATCTGTCGTGGCGGTACGAGCAGCGCTTT
CCGGCCGTGGCGGATGCTCATGTGCGGCTACGCGAGGAATTAGAGAAGGGGGTTCACTATGCCAAGGTGCATAGC
GAGCAGGGTGTACGATACGTTGATGAGAGGGTCACGGATGCGCGCCAGGCTGTCGAGGGTTGGGTTAAGCAGGGT
AAATAG
Gene >Ophun1|7035
ATGGCTGCAAGAGTGCTACTGCAACGGGTCAGCCCCCCCGGAACTGATACTGCTTTCCAAACATCCCGATCACGG
CTGACGGGCAGCTCTCAGCGGTCCGCGGCGTCTCTGGCCTTGCTCGGGATGGCTCTGGCCCCGGCCACGGTCCGC
GCCGAGCAGCCGATGGACAAGCTGGCGGAGCAGCAGTTTGACAAGGTTGTGCGTCTCTTCGCCATCTTGGGTTTC
TTCTCCTGACGAGGACCGTTGCAGAGGAAGCCCATCTACGACGATGTCCATCTCTCGCCTCTGACGAACCCCCTC
GCAACGCCCATAGCCCTCCCACCCTCACAGCCACTCCTCACCGACCAAGACAGCCGCTCAAGCCGGCCTACGCCC
ACGGACCGACTGGCCCTTCAAATCGGCCGCGCCCGCATCCTCCTGCACCGCTACGCCGTTGCAGCAGAAGACAAG
GTCAACGCCACCATGGACACAGCCTTCCACCTAGAGCAATCCTTCACCGACACCATCGCCTCGCTTGCGCCCCCG
CGCGGCAGCGGCGAGCGCCTCATGCCCGGCGCCATCTACGTCGTCGTCGCCGCCATGGCCGGCACCATCGTGACT
CGCAACCGGAACGTGCTGCTGCGGGCTTCGGTGCCGTTGGCGCTGGGGATAGGTGCCGGATGGGCCGTCTTGCCC
ATTACCATGCGCAACGTGGCGGATCTGTCGTGGCGGTACGAGCAGCGCTTTCCGGCCGTGGCGGATGCTCATGTG
CGGCTACGCGAGGAATTAGAGAAGGGGGTTCACTATGCCAAGGTGCATAGCGAGCAGGGTGTACGATACGTTGAT
GAGAGGGTCACGGATGCGCGCCAGGCTGTCGAGGGTTGGGTTAAGCAGGGTAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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