Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|6905
Gene name
LocationContig_8:59014..61593
Strand+
Gene length (bp)2579
Transcript length (bp)2286
Coding sequence length (bp)2286
Protein length (aa) 762

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12752 SUZ SUZ domain 2.4E-14 319 384
PF01424 R3H R3H domain 2.4E-07 231 275

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9DCB4|ARP21_MOUSE cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2 219 390 1.0E-12
sp|Q80TM6|R3HD2_MOUSE R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2 219 381 2.0E-12
sp|A0JNC2|R3HD2_BOVIN R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1 219 381 2.0E-12
sp|Q15032|R3HD1_HUMAN R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3 219 390 3.0E-12
sp|Q9UBL0|ARP21_HUMAN cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2 219 444 5.0E-12
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Swissprot ID Swissprot Description Start End E-value
sp|Q9DCB4|ARP21_MOUSE cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2 219 390 1.0E-12
sp|Q80TM6|R3HD2_MOUSE R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2 219 381 2.0E-12
sp|A0JNC2|R3HD2_BOVIN R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1 219 381 2.0E-12
sp|Q15032|R3HD1_HUMAN R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3 219 390 3.0E-12
sp|Q9UBL0|ARP21_HUMAN cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2 219 444 5.0E-12
sp|Q9Y2K5|R3HD2_HUMAN R3H domain-containing protein 2 OS=Homo sapiens GN=R3HDM2 PE=1 SV=3 219 295 5.0E-09
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GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:0003674 molecular_function No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|6905
MLMRNEIVSVSTSAILPRNISPAPPRGDGAPKPCAAVADRAASSLQDLKLSHRVPHFDVTGTALDRQRAAVSRES
VSDESQKCDSSSELGTKPPSLDGKSITSGTTFALDEKESLRPDDSASVKAAAEDDDAFSHRGSLITGSRMSSEVA
ARGRNIQLGDIPERRSAERPLGTPGHGLPTPQSSASERPPAANPAMPLSADMPSDALNVIYRQAPDDKLLDALTS
PRDRYFLLRLEKDVINFVQDSKEPYMDLPPSNAFCRMLTHKLADYYHMTHSYEPHIGAVRIFRTPFCRVPPSLAT
MGPQPSASTASTPPPALLPKKIMRRGQDNESGLVSAGASKPTSESGSDNKDGKDKQPVAKEKLSREEREEIYKLA
RERIFGSSEEIAQENEGENGMSRASSVSATNKAGIGKRGKTGKQRRDDSDSFDSRYQYTPYWGPQQQTWVAQPHG
QLMAPIPGQFAGPPMPVYPPQAAAAPAYGQQPPAPYGAVSNMAPNPGYPAYAMPQVRTDGASWHSSPVTDRQQMP
PQHAPPRYPSGGSPMTAYGSPVPPPAGMPPLGWQPNFGGPSYPPRGGPAPPVTSQAQVGLPYAYGQLPANPNPND
PKSQHPIPGSYNRNHAFNPKTQSFVPGGNGIHPVPPPQPPFTAPGSHHGSPQIGTPHLAYGGYQTGVPPPPFAGG
YGMVRQESNTSMPPYHGPPQHVPPMPTMVPPPLQPMAQNGPPPMQQNPPTHIAGRPAPPKGPSQMYSHLPTYGNP
ATLPQKPASGI*
Coding >Ophun1|6905
ATGCTAATGCGAAATGAAATCGTTAGCGTCTCGACGAGTGCCATCCTCCCGCGAAACATCTCACCTGCCCCGCCC
CGTGGCGACGGCGCCCCAAAGCCGTGCGCAGCTGTCGCGGACAGGGCGGCATCATCACTCCAAGATCTCAAGCTC
AGCCATAGGGTGCCTCACTTCGATGTCACTGGTACTGCGCTCGATCGCCAGCGCGCGGCAGTAAGCAGGGAAAGC
GTATCCGATGAATCGCAGAAATGCGACTCGAGCTCTGAACTGGGCACAAAACCCCCGAGTTTGGATGGCAAGAGC
ATCACCTCCGGAACTACGTTTGCTCTCGACGAGAAAGAGTCTCTTCGGCCTGATGACAGTGCTAGCGTCAAGGCC
GCGGCCGAGGATGACGACGCCTTTTCGCACCGAGGATCTCTCATTACCGGCTCTCGGATGAGCTCCGAGGTCGCA
GCCCGAGGACGCAACATCCAGCTCGGAGACATCCCGGAGCGCAGGTCGGCAGAGCGGCCCCTCGGGACCCCGGGA
CACGGCCTCCCGACTCCCCAGAGCTCGGCCTCGGAACGACCGCCAGCCGCTAATCCGGCGATGCCGTTGAGTGCC
GACATGCCCTCCGATGCTCTCAATGTCATCTACAGACAGGCACCCGACGACAAGTTGCTCGACGCCCTGACGAGT
CCGAGGGACAGATATTTTCTTCTTAGGTTGGAGAAGGATGTCATCAACTTCGTTCAAGATTCCAAGGAGCCATAC
ATGGACCTACCCCCTTCCAACGCCTTCTGTAGGATGTTGACGCACAAGTTAGCCGACTATTACCATATGACGCAT
TCCTACGAACCGCACATTGGTGCTGTTCGCATATTCAGGACCCCATTCTGTCGTGTGCCACCCTCTCTGGCGACC
ATGGGGCCTCAGCCGAGCGCCTCGACGGCTAGCACCCCGCCTCCCGCTCTTCTTCCCAAGAAGATCATGCGTCGT
GGCCAAGACAACGAGAGCGGCCTGGTCAGCGCCGGTGCATCGAAGCCTACTTCGGAAAGTGGTAGCGACAACAAG
GACGGAAAGGACAAGCAACCGGTGGCAAAAGAAAAGTTATCGAGAGAAGAGCGGGAGGAGATCTACAAGCTGGCT
CGGGAACGCATCTTTGGCAGTTCTGAAGAGATTGCTCAAGAGAACGAAGGTGAGAACGGCATGTCTCGCGCGAGC
TCCGTCTCTGCCACCAACAAGGCTGGCATCGGCAAACGCGGCAAGACGGGCAAGCAGAGACGGGACGACTCGGAC
AGCTTCGATTCCAGATACCAGTATACACCGTACTGGGGTCCTCAGCAGCAGACGTGGGTGGCGCAACCACACGGA
CAGCTTATGGCCCCGATCCCGGGCCAGTTCGCCGGCCCGCCCATGCCCGTGTACCCGCCACAGGCGGCGGCGGCG
CCCGCGTACGGCCAGCAGCCCCCGGCTCCCTACGGCGCCGTCTCCAACATGGCGCCGAACCCGGGATACCCGGCT
TACGCGATGCCCCAGGTTAGAACGGACGGAGCAAGCTGGCATTCTTCTCCAGTGACTGACAGGCAGCAGATGCCA
CCGCAACACGCCCCTCCGCGGTATCCATCCGGAGGCAGTCCGATGACGGCGTACGGCTCCCCCGTGCCTCCGCCT
GCCGGCATGCCGCCGCTGGGCTGGCAACCGAACTTTGGCGGCCCGTCCTATCCCCCGCGAGGAGGACCTGCACCC
CCGGTGACGTCGCAGGCACAGGTAGGCCTTCCCTACGCCTACGGGCAGCTGCCAGCGAATCCCAATCCCAACGAC
CCCAAGAGCCAGCACCCGATCCCGGGCAGCTACAACAGGAACCACGCCTTCAACCCCAAGACGCAGTCGTTCGTG
CCCGGCGGCAACGGCATCCACCCGGTCCCGCCGCCCCAGCCACCGTTCACGGCCCCCGGGTCTCACCACGGCAGC
CCGCAGATCGGAACGCCGCATCTCGCGTATGGCGGCTACCAGACGGGCGTGCCGCCGCCGCCTTTTGCGGGAGGC
TACGGCATGGTAAGGCAAGAATCGAACACGTCGATGCCGCCGTATCACGGGCCACCTCAGCACGTCCCGCCGATG
CCGACCATGGTTCCTCCGCCACTGCAGCCGATGGCGCAGAACGGACCGCCGCCCATGCAACAGAACCCCCCAACG
CACATTGCGGGCAGACCGGCACCTCCCAAGGGGCCCAGCCAGATGTACAGCCACCTGCCCACCTACGGGAACCCG
GCGACGCTGCCTCAGAAACCTGCTTCCGGCATTTAG
Transcript >Ophun1|6905
ATGCTAATGCGAAATGAAATCGTTAGCGTCTCGACGAGTGCCATCCTCCCGCGAAACATCTCACCTGCCCCGCCC
CGTGGCGACGGCGCCCCAAAGCCGTGCGCAGCTGTCGCGGACAGGGCGGCATCATCACTCCAAGATCTCAAGCTC
AGCCATAGGGTGCCTCACTTCGATGTCACTGGTACTGCGCTCGATCGCCAGCGCGCGGCAGTAAGCAGGGAAAGC
GTATCCGATGAATCGCAGAAATGCGACTCGAGCTCTGAACTGGGCACAAAACCCCCGAGTTTGGATGGCAAGAGC
ATCACCTCCGGAACTACGTTTGCTCTCGACGAGAAAGAGTCTCTTCGGCCTGATGACAGTGCTAGCGTCAAGGCC
GCGGCCGAGGATGACGACGCCTTTTCGCACCGAGGATCTCTCATTACCGGCTCTCGGATGAGCTCCGAGGTCGCA
GCCCGAGGACGCAACATCCAGCTCGGAGACATCCCGGAGCGCAGGTCGGCAGAGCGGCCCCTCGGGACCCCGGGA
CACGGCCTCCCGACTCCCCAGAGCTCGGCCTCGGAACGACCGCCAGCCGCTAATCCGGCGATGCCGTTGAGTGCC
GACATGCCCTCCGATGCTCTCAATGTCATCTACAGACAGGCACCCGACGACAAGTTGCTCGACGCCCTGACGAGT
CCGAGGGACAGATATTTTCTTCTTAGGTTGGAGAAGGATGTCATCAACTTCGTTCAAGATTCCAAGGAGCCATAC
ATGGACCTACCCCCTTCCAACGCCTTCTGTAGGATGTTGACGCACAAGTTAGCCGACTATTACCATATGACGCAT
TCCTACGAACCGCACATTGGTGCTGTTCGCATATTCAGGACCCCATTCTGTCGTGTGCCACCCTCTCTGGCGACC
ATGGGGCCTCAGCCGAGCGCCTCGACGGCTAGCACCCCGCCTCCCGCTCTTCTTCCCAAGAAGATCATGCGTCGT
GGCCAAGACAACGAGAGCGGCCTGGTCAGCGCCGGTGCATCGAAGCCTACTTCGGAAAGTGGTAGCGACAACAAG
GACGGAAAGGACAAGCAACCGGTGGCAAAAGAAAAGTTATCGAGAGAAGAGCGGGAGGAGATCTACAAGCTGGCT
CGGGAACGCATCTTTGGCAGTTCTGAAGAGATTGCTCAAGAGAACGAAGGTGAGAACGGCATGTCTCGCGCGAGC
TCCGTCTCTGCCACCAACAAGGCTGGCATCGGCAAACGCGGCAAGACGGGCAAGCAGAGACGGGACGACTCGGAC
AGCTTCGATTCCAGATACCAGTATACACCGTACTGGGGTCCTCAGCAGCAGACGTGGGTGGCGCAACCACACGGA
CAGCTTATGGCCCCGATCCCGGGCCAGTTCGCCGGCCCGCCCATGCCCGTGTACCCGCCACAGGCGGCGGCGGCG
CCCGCGTACGGCCAGCAGCCCCCGGCTCCCTACGGCGCCGTCTCCAACATGGCGCCGAACCCGGGATACCCGGCT
TACGCGATGCCCCAGGTTAGAACGGACGGAGCAAGCTGGCATTCTTCTCCAGTGACTGACAGGCAGCAGATGCCA
CCGCAACACGCCCCTCCGCGGTATCCATCCGGAGGCAGTCCGATGACGGCGTACGGCTCCCCCGTGCCTCCGCCT
GCCGGCATGCCGCCGCTGGGCTGGCAACCGAACTTTGGCGGCCCGTCCTATCCCCCGCGAGGAGGACCTGCACCC
CCGGTGACGTCGCAGGCACAGGTAGGCCTTCCCTACGCCTACGGGCAGCTGCCAGCGAATCCCAATCCCAACGAC
CCCAAGAGCCAGCACCCGATCCCGGGCAGCTACAACAGGAACCACGCCTTCAACCCCAAGACGCAGTCGTTCGTG
CCCGGCGGCAACGGCATCCACCCGGTCCCGCCGCCCCAGCCACCGTTCACGGCCCCCGGGTCTCACCACGGCAGC
CCGCAGATCGGAACGCCGCATCTCGCGTATGGCGGCTACCAGACGGGCGTGCCGCCGCCGCCTTTTGCGGGAGGC
TACGGCATGGTAAGGCAAGAATCGAACACGTCGATGCCGCCGTATCACGGGCCACCTCAGCACGTCCCGCCGATG
CCGACCATGGTTCCTCCGCCACTGCAGCCGATGGCGCAGAACGGACCGCCGCCCATGCAACAGAACCCCCCAACG
CACATTGCGGGCAGACCGGCACCTCCCAAGGGGCCCAGCCAGATGTACAGCCACCTGCCCACCTACGGGAACCCG
GCGACGCTGCCTCAGAAACCTGCTTCCGGCATTTAG
Gene >Ophun1|6905
ATGCTAATGCGAAATGAAATCGTTAGGTAACCGCTTCAGTTTCCACCGAGGCTCCATCGGGTCCCTCGTCGGCTC
ACGATAAGGCTGCGAGCGCCAAGCACCAACGTGCCGCTGCGTTACCAATCGTTGTCAGCAGCGTCTCGACGAGTG
CCATCCTCCCGCGAAACATCTCACCTGCCCCGCCCCGTGGCGACGGCGCCCCAAAGCCGTGCGCAGCTGTCGCGG
ACAGGGCGGCATCATCACTCCAAGATCTCAAGCTCAGCCATAGGGTGCCTCACTTCGATGTCACTGGTACTGCGC
TCGATCGCCAGCGCGCGGCAGTAAGCAGGGAAAGCGTATCCGATGAATCGCAGAAATGCGACTCGAGCTCTGAAC
TGGGCACAAAACCCCCGAGTTTGGATGGCAAGAGCATCACCTCCGGAACTACGTTTGCTCTCGACGAGAAAGAGT
CTCTTCGGCCTGATGACAGTGCTAGCGTCAAGGCCGCGGCCGAGGATGACGACGCCTTTTCGCACCGAGGATCTC
TCATTACCGGCTCTCGGATGAGCTCCGAGGTCGCAGCCCGAGGACGCAACATCCAGCTCGGAGACATCCCGGAGC
GCAGGTCGGCAGAGCGGCCCCTCGGGACCCCGGGACACGGCCTCCCGACTCCCCAGAGCTCGGCCTCGGAACGAC
CGCCAGCCGCTAATCCGGCGATGCCGTTGAGTGCCGACATGCCCTCCGATGCTCTCAATGTCATCTACAGACAGG
CACCCGACGACAAGTTGCTCGACGCCCTGACGAGTCCGAGGGACAGATATTTTCTTCTTAGGTTGGAGAAGGATG
TCATCAACTTCGTTCAAGATTCCAAGTAAGGCTACTTGGAGCCTCGAACTCCTCGTCTTCTTTCCTTGCTGACGT
TCTCAGGGAGCCATACATGGACCTACCCCCTTCCAACGCCTTCTGTAGGATGTTGACGCACAAGTTAGCCGACTA
TTACCATATGACGCATTCCTACGAACCGCACATTGGTGCTGTTCGCATATTCAGGACCCCATTCTGTCGTGTGCC
ACCCTCTCTGGCGACCATGGGGCCTCAGCCGAGCGCCTCGACGGCTAGCACCCCGCCTCCCGCTCTTCTTCCCAA
GAAGATCATGCGTCGTGGCCAAGACAACGAGAGCGGCCTGGTCAGCGCCGGTGCATCGAAGCCTACTTCGGAAAG
TGGTAGCGACAACAAGGACGGAAAGGACAAGCAACCGGTGGCAAAAGAAAAGTGAGCATCACCCGCTGCGGAGAT
GTTGTTACAGTCTTCGAAAACTGACTCTGACATCACCAGGTTATCGAGAGAAGAGCGGGAGGAGATCTACAAGCT
GGCTCGGGAACGCATCTTTGGCAGTTCTGAAGAGATTGCTCAAGGTAGAACTGGCCGTTGCTCCAAGTCCCGCTT
GATGGAATTGGAAACTGACGTCGTCCTGTTTAGAGAACGAAGGTGAGAACGGCATGTCTCGCGCGAGCTCCGTCT
CTGCCACCAACAAGGCTGGCATCGGCAAACGCGGCAAGACGGGCAAGCAGAGACGGGACGACTCGGACAGCTTCG
ATTCCAGATACCAGTATACACCGTACTGGGGTCCTCAGCAGCAGACGTGGGTGGCGCAACCACACGGACAGCTTA
TGGCCCCGATCCCGGGCCAGTTCGCCGGCCCGCCCATGCCCGTGTACCCGCCACAGGCGGCGGCGGCGCCCGCGT
ACGGCCAGCAGCCCCCGGCTCCCTACGGCGCCGTCTCCAACATGGCGCCGAACCCGGGATACCCGGCTTACGCGA
TGCCCCAGGTTAGAACGGACGGAGCAAGCTGGCATTCTTCTCCAGTGACTGACAGGCAGCAGATGCCACCGCAAC
ACGCCCCTCCGCGGTATCCATCCGGAGGCAGTCCGATGACGGCGTACGGCTCCCCCGTGCCTCCGCCTGCCGGCA
TGCCGCCGCTGGGCTGGCAACCGAACTTTGGCGGCCCGTCCTATCCCCCGCGAGGAGGACCTGCACCCCCGGTGA
CGTCGCAGGCACAGGTAGGCCTTCCCTACGCCTACGGGCAGCTGCCAGCGAATCCCAATCCCAACGACCCCAAGA
GCCAGCACCCGATCCCGGGCAGCTACAACAGGAACCACGCCTTCAACCCCAAGACGCAGTCGTTCGTGCCCGGCG
GCAACGGCATCCACCCGGTCCCGCCGCCCCAGCCACCGTTCACGGCCCCCGGGTCTCACCACGGCAGCCCGCAGA
TCGGAACGCCGCATCTCGCGTATGGCGGCTACCAGACGGGCGTGCCGCCGCCGCCTTTTGCGGGAGGCTACGGCA
TGGTAAGGCAAGAATCGAACACGTCGATGCCGCCGTATCACGGGCCACCTCAGCACGTCCCGCCGATGCCGACCA
TGGTTCCTCCGCCACTGCAGCCGATGGCGCAGAACGGACCGCCGCCCATGCAACAGAACCCCCCAACGCACATTG
CGGGCAGACCGGCACCTCCCAAGGGGCCCAGCCAGATGTACAGCCACCTGCCCACCTACGGGAACCCGGCGACGC
TGCCTCAGAAACCTGCTTCCGGCATTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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