Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|6882
Gene name
LocationContig_8:2735..3582
Strand-
Gene length (bp)847
Transcript length (bp)798
Coding sequence length (bp)798
Protein length (aa) 266

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11712 Vma12 Endoplasmic reticulum-based factor for assembly of V-ATPase 6.2E-42 62 204

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly Yes
GO:0043933 protein-containing complex organization No
GO:0065003 protein-containing complex assembly No
GO:0016043 cellular component organization No
GO:0070071 proton-transporting two-sector ATPase complex assembly No
GO:0071840 cellular component organization or biogenesis No
GO:0009987 cellular process No
GO:0070070 proton-transporting V-type ATPase complex assembly No
GO:0008150 biological_process No
GO:0022607 cellular component assembly No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 147 166 19
2 176 198 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|6882
MTPPMVEGLESLGTADGIEDDDSTEPSLARPAVGKPISHGQVVHLWTALQSSQHSPCSLERLLQGSRVFVPPPPP
KPEPSEEYKTLMARLRREEAARAYQRMVSPTPLNESFYDRFPTAAVNRPTHTSDLGDEDDVTYAEVQRQVMLIIN
FLVSILGVAGTLWVVARWWSLPARLLLALSGAIIVAVAETTVYRVYLWRKGQARAKQKAVVETQEVVNTWVVGKD
DRQEDDSSVLLPARQDDVDGAARRRRPAAIEPLEAEAKGA*
Coding >Ophun1|6882
ATGACACCGCCCATGGTTGAGGGCCTGGAGAGCCTCGGAACGGCCGATGGCATCGAAGATGACGATAGCACCGAG
CCCTCGCTTGCCCGGCCTGCGGTCGGCAAGCCGATATCTCACGGCCAGGTGGTCCATCTCTGGACAGCTCTTCAG
TCATCGCAGCATTCTCCCTGCAGCCTGGAAAGACTCCTCCAGGGCTCTCGCGTCTTTGTTCCGCCGCCGCCGCCA
AAGCCCGAGCCCTCGGAAGAATACAAGACGCTCATGGCCCGCCTTCGCCGCGAAGAGGCTGCCCGCGCTTACCAG
CGAATGGTCAGCCCGACTCCTCTGAACGAGAGTTTCTACGACCGCTTCCCGACCGCTGCGGTGAACCGTCCGACG
CATACTTCCGACCTTGGAGACGAGGACGACGTGACGTACGCAGAGGTGCAGCGACAGGTCATGCTCATCATCAAC
TTTCTCGTGAGCATCCTGGGCGTCGCGGGGACGCTGTGGGTGGTGGCACGATGGTGGAGTCTTCCTGCGCGGCTG
CTTCTCGCCCTGAGTGGCGCCATCATCGTTGCCGTTGCCGAGACGACCGTCTACCGCGTCTATCTGTGGAGGAAG
GGCCAGGCCAGGGCCAAGCAAAAAGCCGTGGTCGAGACTCAGGAAGTGGTCAATACGTGGGTTGTCGGGAAAGAT
GACCGCCAAGAAGACGACTCGTCTGTTCTTCTGCCAGCCAGACAGGATGACGTGGATGGTGCGGCCCGGAGGCGA
AGACCAGCGGCGATTGAGCCTTTGGAGGCAGAGGCGAAAGGAGCTTGA
Transcript >Ophun1|6882
ATGACACCGCCCATGGTTGAGGGCCTGGAGAGCCTCGGAACGGCCGATGGCATCGAAGATGACGATAGCACCGAG
CCCTCGCTTGCCCGGCCTGCGGTCGGCAAGCCGATATCTCACGGCCAGGTGGTCCATCTCTGGACAGCTCTTCAG
TCATCGCAGCATTCTCCCTGCAGCCTGGAAAGACTCCTCCAGGGCTCTCGCGTCTTTGTTCCGCCGCCGCCGCCA
AAGCCCGAGCCCTCGGAAGAATACAAGACGCTCATGGCCCGCCTTCGCCGCGAAGAGGCTGCCCGCGCTTACCAG
CGAATGGTCAGCCCGACTCCTCTGAACGAGAGTTTCTACGACCGCTTCCCGACCGCTGCGGTGAACCGTCCGACG
CATACTTCCGACCTTGGAGACGAGGACGACGTGACGTACGCAGAGGTGCAGCGACAGGTCATGCTCATCATCAAC
TTTCTCGTGAGCATCCTGGGCGTCGCGGGGACGCTGTGGGTGGTGGCACGATGGTGGAGTCTTCCTGCGCGGCTG
CTTCTCGCCCTGAGTGGCGCCATCATCGTTGCCGTTGCCGAGACGACCGTCTACCGCGTCTATCTGTGGAGGAAG
GGCCAGGCCAGGGCCAAGCAAAAAGCCGTGGTCGAGACTCAGGAAGTGGTCAATACGTGGGTTGTCGGGAAAGAT
GACCGCCAAGAAGACGACTCGTCTGTTCTTCTGCCAGCCAGACAGGATGACGTGGATGGTGCGGCCCGGAGGCGA
AGACCAGCGGCGATTGAGCCTTTGGAGGCAGAGGCGAAAGGAGCTTGA
Gene >Ophun1|6882
ATGACACCGCCCATGGTTGAGGGCCTGGAGAGCCTCGGAACGGCCGATGGCATCGAAGATGACGATAGCACCGAG
CCCTCGCTTGCCCGGCCTGCGGTCGGCAAGCCGATATCTCACGGCCAGGTGGTCCATCTCTGGACAGCTCTTCAG
TCATCGCAGCATTCTCCCTGCAGCCTGGAAAGACTCCTCCAGGGCTCTCGCGTCTTTGTTCCGCCGCCGCCGCCA
AAGCCCGAGCCCGTCCGTCGTGTCCTCTTCTCTGCGTCGGACGAGCACTGACCCACTGCAGTCGGAAGAATACAA
GACGCTCATGGCCCGCCTTCGCCGCGAAGAGGCTGCCCGCGCTTACCAGCGAATGGTCAGCCCGACTCCTCTGAA
CGAGAGTTTCTACGACCGCTTCCCGACCGCTGCGGTGAACCGTCCGACGCATACTTCCGACCTTGGAGACGAGGA
CGACGTGACGTACGCAGAGGTGCAGCGACAGGTCATGCTCATCATCAACTTTCTCGTGAGCATCCTGGGCGTCGC
GGGGACGCTGTGGGTGGTGGCACGATGGTGGAGTCTTCCTGCGCGGCTGCTTCTCGCCCTGAGTGGCGCCATCAT
CGTTGCCGTTGCCGAGACGACCGTCTACCGCGTCTATCTGTGGAGGAAGGGCCAGGCCAGGGCCAAGCAAAAAGC
CGTGGTCGAGACTCAGGAAGTGGTCAATACGTGGGTTGTCGGGAAAGATGACCGCCAAGAAGACGACTCGTCTGT
TCTTCTGCCAGCCAGACAGGATGACGTGGATGGTGCGGCCCGGAGGCGAAGACCAGCGGCGATTGAGCCTTTGGA
GGCAGAGGCGAAAGGAGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail