Protein ID | Ophun1|6881 |
Gene name | |
Location | Contig_8:1626..2340 |
Strand | - |
Gene length (bp) | 714 |
Transcript length (bp) | 714 |
Coding sequence length (bp) | 714 |
Protein length (aa) | 238 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13878 | zf-C2H2_3 | zinc-finger of acetyl-transferase ESCO | 2.2E-07 | 186 | 223 |
Orthofinder run ID | 4 |
Orthogroup | 5220 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|6881 MSGPPSRIRDRPLRTYGKRSASSNAPGEPPTKRQLIEAKDDVSPTPTTKPGSAPSVTHVTDQPAQANGKLSTRPS IRAYFKPVTRTKVEDSSKPDSYNEPSGSLRSSDAHERRRPRLLRLRPTASNTTAETPLQNRVKTPSDSHKAENRC SASPCAGGNCATQPTETERTAKPGTKSKRRRRPRVQTTLNLSTGGTFAECKVCNTVWNPLYPDDVSYHARRHAKV TAREKRKKDDGL* |
Coding | >Ophun1|6881 ATGTCCGGCCCCCCGTCTCGAATACGCGATAGGCCTTTGCGCACCTATGGCAAGCGATCAGCCTCTTCCAATGCG CCAGGAGAGCCCCCAACCAAGAGACAACTTATCGAAGCGAAGGACGATGTATCTCCTACGCCGACGACGAAACCC GGTTCTGCTCCCAGCGTCACGCATGTCACAGACCAACCGGCTCAAGCCAACGGGAAGCTGTCGACACGTCCATCG ATTCGCGCATATTTTAAGCCGGTGACGCGTACCAAGGTCGAAGACTCTTCGAAGCCGGACTCTTATAACGAGCCG TCCGGCTCTCTCCGCTCGAGCGACGCGCACGAAAGAAGACGACCGCGTCTCCTCAGGCTCCGACCGACGGCATCC AACACGACGGCAGAAACCCCCCTTCAAAACCGCGTCAAAACCCCCAGCGACTCACACAAGGCCGAAAACCGGTGC AGCGCATCTCCCTGCGCGGGCGGAAACTGCGCCACCCAACCAACCGAGACAGAACGCACCGCGAAGCCAGGAACC AAGAGCAAGCGGAGACGCAGGCCGCGCGTACAGACGACGCTGAACTTGTCGACGGGGGGGACTTTTGCTGAGTGC AAGGTCTGCAATACGGTTTGGAATCCTCTTTATCCCGACGACGTCAGCTACCACGCACGGCGTCACGCCAAGGTG ACGGCGAGGGAGAAGAGAAAGAAAGACGATGGTCTTTAG |
Transcript | >Ophun1|6881 ATGTCCGGCCCCCCGTCTCGAATACGCGATAGGCCTTTGCGCACCTATGGCAAGCGATCAGCCTCTTCCAATGCG CCAGGAGAGCCCCCAACCAAGAGACAACTTATCGAAGCGAAGGACGATGTATCTCCTACGCCGACGACGAAACCC GGTTCTGCTCCCAGCGTCACGCATGTCACAGACCAACCGGCTCAAGCCAACGGGAAGCTGTCGACACGTCCATCG ATTCGCGCATATTTTAAGCCGGTGACGCGTACCAAGGTCGAAGACTCTTCGAAGCCGGACTCTTATAACGAGCCG TCCGGCTCTCTCCGCTCGAGCGACGCGCACGAAAGAAGACGACCGCGTCTCCTCAGGCTCCGACCGACGGCATCC AACACGACGGCAGAAACCCCCCTTCAAAACCGCGTCAAAACCCCCAGCGACTCACACAAGGCCGAAAACCGGTGC AGCGCATCTCCCTGCGCGGGCGGAAACTGCGCCACCCAACCAACCGAGACAGAACGCACCGCGAAGCCAGGAACC AAGAGCAAGCGGAGACGCAGGCCGCGCGTACAGACGACGCTGAACTTGTCGACGGGGGGGACTTTTGCTGAGTGC AAGGTCTGCAATACGGTTTGGAATCCTCTTTATCCCGACGACGTCAGCTACCACGCACGGCGTCACGCCAAGGTG ACGGCGAGGGAGAAGAGAAAGAAAGACGATGGTCTTTAG |
Gene | >Ophun1|6881 ATGTCCGGCCCCCCGTCTCGAATACGCGATAGGCCTTTGCGCACCTATGGCAAGCGATCAGCCTCTTCCAATGCG CCAGGAGAGCCCCCAACCAAGAGACAACTTATCGAAGCGAAGGACGATGTATCTCCTACGCCGACGACGAAACCC GGTTCTGCTCCCAGCGTCACGCATGTCACAGACCAACCGGCTCAAGCCAACGGGAAGCTGTCGACACGTCCATCG ATTCGCGCATATTTTAAGCCGGTGACGCGTACCAAGGTCGAAGACTCTTCGAAGCCGGACTCTTATAACGAGCCG TCCGGCTCTCTCCGCTCGAGCGACGCGCACGAAAGAAGACGACCGCGTCTCCTCAGGCTCCGACCGACGGCATCC AACACGACGGCAGAAACCCCCCTTCAAAACCGCGTCAAAACCCCCAGCGACTCACACAAGGCCGAAAACCGGTGC AGCGCATCTCCCTGCGCGGGCGGAAACTGCGCCACCCAACCAACCGAGACAGAACGCACCGCGAAGCCAGGAACC AAGAGCAAGCGGAGACGCAGGCCGCGCGTACAGACGACGCTGAACTTGTCGACGGGGGGGACTTTTGCTGAGTGC AAGGTCTGCAATACGGTTTGGAATCCTCTTTATCCCGACGACGTCAGCTACCACGCACGGCGTCACGCCAAGGTG ACGGCGAGGGAGAAGAGAAAGAAAGACGATGGTCTTTAG |