Protein ID | Ophun1|6859 |
Gene name | |
Location | Contig_790:160..2413 |
Strand | + |
Gene length (bp) | 2253 |
Transcript length (bp) | 1998 |
Coding sequence length (bp) | 1998 |
Protein length (aa) | 666 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13632 | Glyco_trans_2_3 | Glycosyl transferase family group 2 | 1.8E-18 | 279 | 542 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 32 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 11 | 28 | 17 |
2 | 74 | 96 | 22 |
3 | 524 | 543 | 19 |
4 | 563 | 585 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|6859 MSLFAWCSRRAGGLSMLALLALCYWVITDEATRARQPAAAAAAASRLDRFRPSYSSAKSSPLSSSSGPGTWTSVF AYYCLLIHILVFIFPLRACWSVWDITRSLRKLSHTHGRSYETLRLGLRRRGSSTSISSSETLTSDSLTSDSNGFS STNSEASDEPDMYTDATDVSDDSVIHAIIIPNYKEELDTLKETLDVLASHPRAQFSYDIYLGMEQREVDGESKAL SLIQEFVKKFRSIDYTIHPAGIPGESAGKGSNLGWAAKKLSAKYSMGIRKNVVVTGIDADSHLSPSYFTNVTFMH QSYPDTAATTLYAAPIVFDRNAHKVPAIVRVADILWCAAGMSGLYRSSTIAPPTSVYSLPLLLVDRVGGWDCDAE AIGEDLHMYLKCFFALNGNLTCRTVLSPVSQSNVTGGGKGGVRGTVIDMHARYKQALRHMWGALDTGFALREAVV MWQERKRTSRAFRPLHRSNGDSSDCYFPDNNVSDDSLGSVPETGVFSDVTQNTLKEPQWLRVLFLFHRLFEAHFL PVHMTILILASTLYMWVVDGKGHVDGLRWIFSVCNVLRTLGFVEVALYLFLYESFHRICVKTRRREMKKANLADG MCFSERTLRANLIDYVLVPLVAPIYGAIPCAQAEISHFWTVDLVYTVSLKATRQRARSFVAPDLA* |
Coding | >Ophun1|6859 ATGTCTCTCTTCGCATGGTGTTCGCGACGGGCTGGCGGCTTGAGTATGCTGGCCTTGCTGGCTCTTTGCTACTGG GTCATCACCGACGAGGCCACGAGGGCTCGACAGCCTGCTGCTGCTGCTGCCGCCGCCTCGAGGCTTGATCGCTTT CGTCCGTCGTACTCTTCCGCCAAGTCGTCCCCGTTGTCGTCATCGTCCGGCCCGGGCACCTGGACCTCCGTCTTC GCCTACTACTGTCTGCTTATCCATATCCTCGTCTTCATCTTTCCTCTTCGCGCCTGTTGGTCTGTTTGGGACATC ACCAGGTCGCTTCGCAAATTGTCCCACACCCACGGCAGATCCTACGAGACGCTCAGGCTCGGCCTCCGCAGACGC GGCTCCAGCACTTCAATCTCTAGCTCCGAGACGCTCACCTCCGACTCGCTCACCTCGGACAGCAATGGCTTCTCC TCCACCAACAGCGAGGCCAGCGACGAGCCCGACATGTACACCGACGCCACCGATGTCTCCGACGACTCCGTCATT CACGCCATCATCATTCCCAACTACAAGGAAGAGTTGGATACCCTCAAGGAAACGCTCGACGTCCTCGCTTCTCAC CCTCGCGCGCAGTTCTCCTACGATATCTACCTCGGCATGGAACAGCGTGAGGTCGATGGCGAATCAAAGGCCCTC TCTCTCATTCAGGAGTTTGTCAAAAAGTTTCGCTCAATCGACTACACCATCCATCCCGCTGGCATCCCCGGCGAG TCCGCCGGCAAGGGCAGCAACCTGGGCTGGGCCGCCAAAAAACTCAGCGCCAAGTACTCCATGGGAATCCGCAAG AATGTCGTTGTGACTGGCATCGATGCCGACAGCCACCTCTCGCCAAGCTACTTCACCAACGTCACCTTCATGCAC CAGTCGTACCCGGACACGGCCGCCACGACCCTGTACGCCGCGCCAATCGTCTTCGACCGCAATGCCCACAAGGTG CCCGCCATCGTCCGCGTCGCCGACATCCTCTGGTGCGCCGCCGGCATGTCGGGACTCTACCGGTCCTCGACCATT GCGCCGCCCACGTCCGTCTACTCCCTGCCCTTGCTGCTCGTCGACCGCGTCGGCGGCTGGGACTGCGATGCCGAG GCCATCGGCGAGGACCTGCACATGTACCTCAAGTGCTTCTTCGCCCTCAACGGCAACCTCACCTGTCGCACCGTC CTGAGCCCCGTCAGCCAGAGCAACGTCACGGGCGGCGGCAAGGGCGGAGTCCGAGGCACCGTCATCGACATGCAC GCTCGGTACAAGCAGGCTCTGCGGCACATGTGGGGGGCTCTCGATACCGGTTTCGCCTTGCGGGAGGCCGTCGTC ATGTGGCAGGAACGCAAGCGCACGTCGAGGGCTTTTCGTCCCCTTCATCGCAGCAATGGCGACAGTTCCGACTGC TACTTTCCCGACAACAACGTCAGCGACGATTCCTTGGGCTCCGTGCCCGAGACGGGCGTCTTCTCGGACGTGACG CAGAATACTCTCAAGGAACCGCAGTGGCTGCGCGTCTTGTTCCTCTTTCACCGCCTGTTCGAAGCGCACTTCCTC CCTGTCCACATGACGATACTCATCTTGGCCTCGACCCTGTACATGTGGGTCGTGGACGGCAAGGGCCATGTCGAC GGCCTGCGCTGGATCTTCTCCGTCTGCAACGTCCTACGGACCCTGGGCTTCGTCGAGGTGGCCTTGTACCTCTTC CTCTACGAAAGCTTCCACCGGATATGCGTCAAGACCCGCCGCAGGGAAATGAAGAAGGCCAACCTCGCTGACGGC ATGTGCTTCTCCGAACGGACCTTGCGGGCCAACCTGATCGATTACGTCCTGGTACCCCTGGTAGCACCCATATAT GGAGCGATACCCTGCGCTCAGGCCGAGATCTCCCATTTCTGGACGGTAGATCTCGTCTACACCGTCAGCCTCAAG GCAACGCGGCAACGAGCTCGGTCATTCGTGGCTCCCGATCTGGCCTGA |
Transcript | >Ophun1|6859 ATGTCTCTCTTCGCATGGTGTTCGCGACGGGCTGGCGGCTTGAGTATGCTGGCCTTGCTGGCTCTTTGCTACTGG GTCATCACCGACGAGGCCACGAGGGCTCGACAGCCTGCTGCTGCTGCTGCCGCCGCCTCGAGGCTTGATCGCTTT CGTCCGTCGTACTCTTCCGCCAAGTCGTCCCCGTTGTCGTCATCGTCCGGCCCGGGCACCTGGACCTCCGTCTTC GCCTACTACTGTCTGCTTATCCATATCCTCGTCTTCATCTTTCCTCTTCGCGCCTGTTGGTCTGTTTGGGACATC ACCAGGTCGCTTCGCAAATTGTCCCACACCCACGGCAGATCCTACGAGACGCTCAGGCTCGGCCTCCGCAGACGC GGCTCCAGCACTTCAATCTCTAGCTCCGAGACGCTCACCTCCGACTCGCTCACCTCGGACAGCAATGGCTTCTCC TCCACCAACAGCGAGGCCAGCGACGAGCCCGACATGTACACCGACGCCACCGATGTCTCCGACGACTCCGTCATT CACGCCATCATCATTCCCAACTACAAGGAAGAGTTGGATACCCTCAAGGAAACGCTCGACGTCCTCGCTTCTCAC CCTCGCGCGCAGTTCTCCTACGATATCTACCTCGGCATGGAACAGCGTGAGGTCGATGGCGAATCAAAGGCCCTC TCTCTCATTCAGGAGTTTGTCAAAAAGTTTCGCTCAATCGACTACACCATCCATCCCGCTGGCATCCCCGGCGAG TCCGCCGGCAAGGGCAGCAACCTGGGCTGGGCCGCCAAAAAACTCAGCGCCAAGTACTCCATGGGAATCCGCAAG AATGTCGTTGTGACTGGCATCGATGCCGACAGCCACCTCTCGCCAAGCTACTTCACCAACGTCACCTTCATGCAC CAGTCGTACCCGGACACGGCCGCCACGACCCTGTACGCCGCGCCAATCGTCTTCGACCGCAATGCCCACAAGGTG CCCGCCATCGTCCGCGTCGCCGACATCCTCTGGTGCGCCGCCGGCATGTCGGGACTCTACCGGTCCTCGACCATT GCGCCGCCCACGTCCGTCTACTCCCTGCCCTTGCTGCTCGTCGACCGCGTCGGCGGCTGGGACTGCGATGCCGAG GCCATCGGCGAGGACCTGCACATGTACCTCAAGTGCTTCTTCGCCCTCAACGGCAACCTCACCTGTCGCACCGTC CTGAGCCCCGTCAGCCAGAGCAACGTCACGGGCGGCGGCAAGGGCGGAGTCCGAGGCACCGTCATCGACATGCAC GCTCGGTACAAGCAGGCTCTGCGGCACATGTGGGGGGCTCTCGATACCGGTTTCGCCTTGCGGGAGGCCGTCGTC ATGTGGCAGGAACGCAAGCGCACGTCGAGGGCTTTTCGTCCCCTTCATCGCAGCAATGGCGACAGTTCCGACTGC TACTTTCCCGACAACAACGTCAGCGACGATTCCTTGGGCTCCGTGCCCGAGACGGGCGTCTTCTCGGACGTGACG CAGAATACTCTCAAGGAACCGCAGTGGCTGCGCGTCTTGTTCCTCTTTCACCGCCTGTTCGAAGCGCACTTCCTC CCTGTCCACATGACGATACTCATCTTGGCCTCGACCCTGTACATGTGGGTCGTGGACGGCAAGGGCCATGTCGAC GGCCTGCGCTGGATCTTCTCCGTCTGCAACGTCCTACGGACCCTGGGCTTCGTCGAGGTGGCCTTGTACCTCTTC CTCTACGAAAGCTTCCACCGGATATGCGTCAAGACCCGCCGCAGGGAAATGAAGAAGGCCAACCTCGCTGACGGC ATGTGCTTCTCCGAACGGACCTTGCGGGCCAACCTGATCGATTACGTCCTGGTACCCCTGGTAGCACCCATATAT GGAGCGATACCCTGCGCTCAGGCCGAGATCTCCCATTTCTGGACGGTAGATCTCGTCTACACCGTCAGCCTCAAG GCAACGCGGCAACGAGCTCGGTCATTCGTGGCTCCCGATCTGGCCTGA |
Gene | >Ophun1|6859 ATGTCTCTCTTCGCATGGTGTTCGCGACGGGCTGGCGGCTTGAGTATGCTGGCCTTGCTGGCTCTTTGCTACTGG GTCATCACCGACGAGGCCACGAGGGCTCGACAGCCTGCTGCTGCTGCTGCCGCCGCCTCGAGGCTTGATCGCTTT CGTCCGTCGTACTCTTCCGCCAAGTCGTCCCCGTTGTCGTCATCGTCCGGCCCGGGCACCTGGACCTCCGTCTTC GCCTACTACTGTCTGCTTATCCATATCCTCGTCTTCATCTTTCCTCTTCGCGCCTGTTGGTCTGTTTGGGACATC ACCAGGTCGCTTCGCAAATTGTCCCACACCCACGGCAGATCCTACGAGACGCTCAGGCTCGGCCTCCGCAGACGC GGCTCCAGCACTTCAATCTCTAGCTCCGAGACGCTCACCTCCGACTCGCTCACCTCGGACAGCAATGGCTTCTCC TCCACCAACAGCGAGGCCAGCGACGAGCCCGACATGTACACCGACGCCACCGATGTCTCCGACGACTCCGTCATT CACGCCATCATCATTCCCAACTACAAGGAAGAGTTGGATACCCTCAAGGAAACGCTCGACGTCCTCGCTTCTCAC CCTCGCGCGCAGTTCTCCTACGATGTAAGTCTCGTCTGCCCCCTCGACTCTGCGTCGCGCAACCGCTCGGGCCAC GGTTTGCTTACAACAATGTCCCCCGCTTCAAGATCTACCTCGGCATGGAACAGCGTGAGGTCGATGGCGAATCAA AGGCCCTCTCTCTCATTCAGGAGTTTGTCAAAAAGTTTCGCTCAATCGACTACACCATCCATCCCGCTGGCATCC CCGGCGAGTCCGCCGGCAAGGGCAGCAACCTGGGCTGGGCCGCCAAAAAACTCAGCGCCAAGTACTCCATGGGAA TCCGCAAGAATGTCGTTGTGACTGGCATCGATGGTACGGGCCCCTTTCTCCCCCCTTTCTCCCCCCTCTCTCTTC CTCTCTCTCTTCCTCTCTCCCATGTCTTTTCTCTCCCATGTCGTGCCATGCCCGCGCAGGTCTTGTGCCACGTGG AAACCTGTGCCGTGCCAGCCGAGTTTGCCCTATTCCCGCTGACCTCCTCCTACAGCCGACAGCCACCTCTCGCCA AGCTACTTCACCAACGTCACCTTCATGCACCAGTCGTACCCGGACACGGCCGCCACGACCCTGTACGCCGCGCCA ATCGTCTTCGACCGCAATGCCCACAAGGTGCCCGCCATCGTCCGCGTCGCCGACATCCTCTGGTGCGCCGCCGGC ATGTCGGGACTCTACCGGTCCTCGACCATTGCGCCGCCCACGTCCGTCTACTCCCTGCCCTTGCTGCTCGTCGAC CGCGTCGGCGGCTGGGACTGCGATGCCGAGGCCATCGGCGAGGACCTGCACATGTACCTCAAGTGCTTCTTCGCC CTCAACGGCAACCTCACCTGTCGCACCGTCCTGAGCCCCGTCAGCCAGAGCAACGTCACGGGCGGCGGCAAGGGC GGAGTCCGAGGCACCGTCATCGACATGCACGCTCGGTACAAGCAGGCTCTGCGGCACATGTGGGGGGCTCTCGAT ACCGGTTTCGCCTTGCGGGAGGCCGTCGTCATGTGGCAGGAACGCAAGCGCACGTCGAGGGCTTTTCGTCCCCTT CATCGCAGCAATGGCGACAGTTCCGACTGCTACTTTCCCGACAACAACGTCAGCGACGATTCCTTGGGCTCCGTG CCCGAGACGGGCGTCTTCTCGGACGTGACGCAGAATACTCTCAAGGAACCGCAGTGGCTGCGCGTCTTGTTCCTC TTTCACCGCCTGTTCGAAGCGCACTTCCTCCCTGTCCACATGACGATACTCATCTTGGCCTCGACCCTGTACATG TGGGTCGTGGACGGCAAGGGCCATGTCGACGGCCTGCGCTGGATCTTCTCCGTCTGCAACGTCCTACGGACCCTG GGCTTCGTCGAGGTGGCCTTGTACCTCTTCCTCTACGAAAGCTTCCACCGGATATGCGTCAAGACCCGCCGCAGG GAAATGAAGAAGGCCAACCTCGCTGACGGCATGTGCTTCTCCGAACGGACCTTGCGGGCCAACCTGATCGATTAC GTCCTGGTACCCCTGGTAGCACCCATATATGGAGCGATACCCTGCGCTCAGGCCGAGATCTCCCATTTCTGGACG GTAGATCTCGTCTACACCGTCAGCCTCAAGGCAACGCGGCAACGAGCTCGGTCATTCGTGGCTCCCGATCTGGCC TGA |