© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|679 |
| Gene name | |
| Location | Contig_1210:517..1848 |
| Strand | + |
| Gene length (bp) | 1331 |
| Transcript length (bp) | 1275 |
| Coding sequence length (bp) | 1275 |
| Protein length (aa) | 425 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 3.9E-20 | 54 | 185 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 44 | 302 | 4.0E-24 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 52 | 217 | 4.0E-15 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 52 | 291 | 4.0E-10 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 37 | 288 | 7.0E-10 |
| sp|P58710|GGLO_MOUSE | L-gulonolactone oxidase OS=Mus musculus GN=Gulo PE=1 SV=3 | 41 | 220 | 2.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 44 | 302 | 4.0E-24 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 52 | 217 | 4.0E-15 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 52 | 291 | 4.0E-10 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 37 | 288 | 7.0E-10 |
| sp|P58710|GGLO_MOUSE | L-gulonolactone oxidase OS=Mus musculus GN=Gulo PE=1 SV=3 | 41 | 220 | 2.0E-08 |
| sp|Q3ZC33|GGLO_BOVIN | L-gulonolactone oxidase OS=Bos taurus GN=GULO PE=2 SV=3 | 44 | 220 | 1.0E-07 |
| sp|Q9FUJ3|CKX2_ARATH | Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 | 51 | 212 | 2.0E-07 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 52 | 216 | 3.0E-07 |
| sp|Q8HXW0|GGLO_PIG | L-gulonolactone oxidase OS=Sus scrofa GN=GULO PE=2 SV=3 | 44 | 220 | 4.0E-07 |
| sp|Q9FZC7|FOX4_ARATH | Flavin-dependent oxidoreductase FOX4 OS=Arabidopsis thaliana GN=FOX4 PE=2 SV=1 | 43 | 213 | 6.0E-07 |
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 158 | 229 | 9.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0003674 | molecular_function | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0036094 | small molecule binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|679 MLITTLLALSFPLLSLAHPLNLSPLRTSLSPSSIIIEQDPLPRWSDYNAPSPYLTIHPATIADVQTTIRWADEQD LPFIVYGAGNDWANSSFTHGFYLALDLLSSISFTPDRTEASIQAGALTSDVIRAGYAASSLILTATCDCVSFLGA LLGGGVGHLTGEYGLLVDTLLSIDVVLADGSLRTVTEETEPELWWALRGAGASFGVVVGVRVRAYPEAGLWAWRG SLVYSQGQLTPVLDVLNELELSPRAAVSLLYANRNDTPAIVIDVFYHGSASEATAFFHPLLSLRPISDTTSIKAW PEWNEPSSAACTKGGRKPTWGVGLARFNAAVFARVFQVWLELTGQPFARKSSMLLNWVSMDKARAVPLGDSAVPF RDAVALFATFTVAYEDAGFDDEALRYGRLVRGLWRGADGLERPLTWVLC* |
| Coding | >Ophun1|679 ATGCTCATCACCACCCTCCTCGCCCTCTCCTTTCCCCTCCTCTCTCTCGCCCATCCCCTCAACCTCTCCCCCCTA CGCACATCCCTCTCCCCCTCAAGCATCATCATCGAGCAAGACCCTCTCCCCCGCTGGAGCGACTACAACGCTCCA TCCCCTTACCTCACCATCCACCCCGCCACCATCGCCGACGTGCAGACAACCATCCGCTGGGCGGATGAACAGGAC CTTCCCTTCATCGTCTACGGCGCTGGCAATGACTGGGCAAACTCGTCCTTTACTCATGGCTTCTACCTCGCCCTC GACCTCCTCTCCTCCATCTCCTTCACCCCGGACCGCACTGAAGCCTCCATCCAAGCCGGCGCCTTGACCTCCGAC GTCATCCGCGCCGGCTACGCTGCCTCCTCCCTCATCTTGACCGCTACATGCGACTGCGTGTCCTTCCTCGGCGCC CTGCTAGGCGGCGGCGTGGGACACCTCACGGGCGAGTACGGCCTGCTGGTCGACACGCTGCTGTCCATCGACGTC GTTCTGGCTGACGGGTCGCTCCGGACGGTGACGGAGGAGACGGAGCCGGAGCTGTGGTGGGCCCTTCGCGGGGCG GGGGCCAGCTTCGGCGTCGTCGTCGGCGTTCGGGTCCGGGCTTATCCGGAGGCTGGGCTTTGGGCTTGGAGGGGG AGTCTGGTGTACTCTCAGGGGCAGCTTACTCCGGTGCTTGATGTTCTCAACGAGTTGGAGTTGTCGCCTCGAGCA GCGGTGAGCCTCCTCTACGCAAACCGCAATGATACGCCTGCCATCGTCATCGACGTCTTCTACCACGGCTCCGCA TCCGAAGCCACCGCCTTCTTCCACCCGCTCCTCTCCCTAAGACCAATCTCAGACACAACTTCCATCAAAGCCTGG CCGGAGTGGAACGAGCCCTCGTCCGCAGCGTGCACCAAGGGAGGGAGGAAACCTACCTGGGGCGTTGGCCTCGCG CGCTTCAACGCAGCCGTCTTCGCCCGCGTCTTCCAAGTCTGGCTCGAGCTTACGGGACAGCCCTTTGCGAGGAAG AGTTCGATGCTGCTGAACTGGGTGTCCATGGACAAGGCCAGGGCTGTGCCGCTGGGGGATTCGGCGGTTCCGTTT CGGGATGCTGTCGCTTTGTTTGCTACCTTTACGGTTGCGTACGAGGACGCGGGGTTTGATGACGAGGCTTTGCGG TATGGGCGGTTGGTTAGGGGGTTGTGGAGGGGGGCGGATGGGTTGGAGAGGCCTTTGACGTGGGTTCTCTGTTGA |
| Transcript | >Ophun1|679 ATGCTCATCACCACCCTCCTCGCCCTCTCCTTTCCCCTCCTCTCTCTCGCCCATCCCCTCAACCTCTCCCCCCTA CGCACATCCCTCTCCCCCTCAAGCATCATCATCGAGCAAGACCCTCTCCCCCGCTGGAGCGACTACAACGCTCCA TCCCCTTACCTCACCATCCACCCCGCCACCATCGCCGACGTGCAGACAACCATCCGCTGGGCGGATGAACAGGAC CTTCCCTTCATCGTCTACGGCGCTGGCAATGACTGGGCAAACTCGTCCTTTACTCATGGCTTCTACCTCGCCCTC GACCTCCTCTCCTCCATCTCCTTCACCCCGGACCGCACTGAAGCCTCCATCCAAGCCGGCGCCTTGACCTCCGAC GTCATCCGCGCCGGCTACGCTGCCTCCTCCCTCATCTTGACCGCTACATGCGACTGCGTGTCCTTCCTCGGCGCC CTGCTAGGCGGCGGCGTGGGACACCTCACGGGCGAGTACGGCCTGCTGGTCGACACGCTGCTGTCCATCGACGTC GTTCTGGCTGACGGGTCGCTCCGGACGGTGACGGAGGAGACGGAGCCGGAGCTGTGGTGGGCCCTTCGCGGGGCG GGGGCCAGCTTCGGCGTCGTCGTCGGCGTTCGGGTCCGGGCTTATCCGGAGGCTGGGCTTTGGGCTTGGAGGGGG AGTCTGGTGTACTCTCAGGGGCAGCTTACTCCGGTGCTTGATGTTCTCAACGAGTTGGAGTTGTCGCCTCGAGCA GCGGTGAGCCTCCTCTACGCAAACCGCAATGATACGCCTGCCATCGTCATCGACGTCTTCTACCACGGCTCCGCA TCCGAAGCCACCGCCTTCTTCCACCCGCTCCTCTCCCTAAGACCAATCTCAGACACAACTTCCATCAAAGCCTGG CCGGAGTGGAACGAGCCCTCGTCCGCAGCGTGCACCAAGGGAGGGAGGAAACCTACCTGGGGCGTTGGCCTCGCG CGCTTCAACGCAGCCGTCTTCGCCCGCGTCTTCCAAGTCTGGCTCGAGCTTACGGGACAGCCCTTTGCGAGGAAG AGTTCGATGCTGCTGAACTGGGTGTCCATGGACAAGGCCAGGGCTGTGCCGCTGGGGGATTCGGCGGTTCCGTTT CGGGATGCTGTCGCTTTGTTTGCTACCTTTACGGTTGCGTACGAGGACGCGGGGTTTGATGACGAGGCTTTGCGG TATGGGCGGTTGGTTAGGGGGTTGTGGAGGGGGGCGGATGGGTTGGAGAGGCCTTTGACGTGGGTTCTCTGTTGA |
| Gene | >Ophun1|679 ATGCTCATCACCACCCTCCTCGCCCTCTCCTTTCCCCTCCTCTCTCTCGCCCATCCCCTCAACCTCTCCCCCCTA CGCACATCCCTCTCCCCCTCAAGCATCATCATCGAGCAAGACCCTCTCCCCCGCTGGAGCGACTACAACGCTCCA TCCCCTTACCTCACCATCCACCCCGCCACCATCGCCGACGTGCAGACAACCGTAAGCCCCGTCCCCGAAAGCCGC CCACCTGCTTACCTCTCATCCCCTCCCCACAGATCCGCTGGGCGGATGAACAGGACCTTCCCTTCATCGTCTACG GCGCTGGCAATGACTGGGCAAACTCGTCCTTTACTCATGGCTTCTACCTCGCCCTCGACCTCCTCTCCTCCATCT CCTTCACCCCGGACCGCACTGAAGCCTCCATCCAAGCCGGCGCCTTGACCTCCGACGTCATCCGCGCCGGCTACG CTGCCTCCTCCCTCATCTTGACCGCTACATGCGACTGCGTGTCCTTCCTCGGCGCCCTGCTAGGCGGCGGCGTGG GACACCTCACGGGCGAGTACGGCCTGCTGGTCGACACGCTGCTGTCCATCGACGTCGTTCTGGCTGACGGGTCGC TCCGGACGGTGACGGAGGAGACGGAGCCGGAGCTGTGGTGGGCCCTTCGCGGGGCGGGGGCCAGCTTCGGCGTCG TCGTCGGCGTTCGGGTCCGGGCTTATCCGGAGGCTGGGCTTTGGGCTTGGAGGGGGAGTCTGGTGTACTCTCAGG GGCAGCTTACTCCGGTGCTTGATGTTCTCAACGAGTTGGAGTTGTCGCCTCGAGCAGCGGTGAGCCTCCTCTACG CAAACCGCAATGATACGCCTGCCATCGTCATCGACGTCTTCTACCACGGCTCCGCATCCGAAGCCACCGCCTTCT TCCACCCGCTCCTCTCCCTAAGACCAATCTCAGACACAACTTCCATCAAAGCCTGGCCGGAGTGGAACGAGCCCT CGTCCGCAGCGTGCACCAAGGGAGGGAGGAAACCTACCTGGGGCGTTGGCCTCGCGCGCTTCAACGCAGCCGTCT TCGCCCGCGTCTTCCAAGTCTGGCTCGAGCTTACGGGACAGCCCTTTGCGAGGAAGAGTTCGATGCTGCTGAACT GGGTGTCCATGGACAAGGCCAGGGCTGTGCCGCTGGGGGATTCGGCGGTTCCGTTTCGGGATGCTGTCGCTTTGT TTGCTACCTTTACGGTTGCGTACGAGGACGCGGGGTTTGATGACGAGGCTTTGCGGTATGGGCGGTTGGTTAGGG GGTTGTGGAGGGGGGCGGATGGGTTGGAGAGGCCTTTGACGTGGGTTCTCTGTTGA |