Protein ID | Ophun1|6768 |
Gene name | |
Location | Contig_77:33514..34756 |
Strand | + |
Gene length (bp) | 1242 |
Transcript length (bp) | 1242 |
Coding sequence length (bp) | 1242 |
Protein length (aa) | 414 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01494 | FAD_binding_3 | FAD binding domain | 4.1E-11 | 8 | 176 |
PF01494 | FAD_binding_3 | FAD binding domain | 1.8E-07 | 314 | 351 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q01911|TETX_BACFG | Tetracycline resistance protein from transposon Tn4351/Tn4400 OS=Bacteroides fragilis GN=tetX PE=4 SV=1 | 7 | 390 | 2.0E-31 |
sp|Q9FGC7|ZEP_ARATH | Zeaxanthin epoxidase, chloroplastic OS=Arabidopsis thaliana GN=ZEP PE=1 SV=1 | 5 | 379 | 9.0E-08 |
sp|P86491|6HN3M_PSEFL | 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas fluorescens PE=1 SV=1 | 114 | 391 | 5.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0071949 | FAD binding | Yes |
GO:0097159 | organic cyclic compound binding | No |
GO:0003674 | molecular_function | No |
GO:0000166 | nucleotide binding | No |
GO:0050660 | flavin adenine dinucleotide binding | No |
GO:0036094 | small molecule binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043167 | ion binding | No |
GO:0005488 | binding | No |
GO:0043168 | anion binding | No |
GO:1901265 | nucleoside phosphate binding | No |
Orthofinder run ID | 4 |
Orthogroup | 4857 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|6768 MPGFRPRIAIAGGGPSGLALSLLLRRQGIGSTVYELRHKPRPEELAEPSGMLDLHEESGLTVMRECGLWDEFQAA TGDCSEAMRVLRSDGVEVHADDGQSEPRPEIARHGLIRLLAEKLPGDVVRWGSKVSAVRRARNPETGAVEATVEL GDSGSATYDLVIGADGAWSRVRALLSDTKPAYCGTQMVTATLRHATTLHPDLADLSGSGSLWALGDNKALMTQRG SQDSIRVYAAISSPDENWAATVGLRGRTASEAKAFLLGPGGPFRNWAAPLRHLLATVCDADSQDHVGRAIDIMPM YALPAGHLWARGDGGATLIGDAAHLMLPFAGEGVNLALWDALDLARLLAEMPAASDAMSWHKALAPRLRAMEETM QARAKDKSEEARRNKDMILGDGAADVVAAWFKQHQSGD* |
Coding | >Ophun1|6768 ATGCCCGGCTTCAGGCCCCGAATCGCCATCGCGGGCGGCGGCCCCTCCGGCCTGGCCCTCTCGCTGCTCCTCCGA CGACAGGGCATCGGCAGCACCGTGTACGAGCTGCGGCACAAGCCCCGGCCGGAGGAGCTGGCCGAACCGTCGGGC ATGCTGGACCTGCACGAGGAGTCTGGCCTGACGGTGATGCGCGAATGCGGTCTCTGGGACGAGTTCCAGGCAGCG ACTGGCGACTGCTCCGAGGCAATGCGCGTCTTGCGGTCGGACGGCGTCGAGGTTCACGCAGACGACGGACAGAGC GAGCCGCGACCAGAGATTGCTCGACACGGGCTCATCCGGCTGCTGGCCGAGAAGCTTCCCGGAGACGTCGTCCGA TGGGGCAGCAAGGTGTCGGCGGTGCGGAGGGCCCGTAATCCGGAGACGGGGGCGGTCGAGGCCACAGTCGAGCTC GGTGACAGCGGCTCGGCGACGTACGACCTGGTCATCGGAGCCGACGGCGCCTGGTCTCGCGTCAGGGCGCTCCTC TCGGACACGAAGCCGGCCTACTGCGGAACGCAGATGGTGACGGCGACGCTGCGACACGCAACGACCCTTCACCCG GATCTGGCCGACCTCAGTGGCTCAGGCTCTCTCTGGGCGCTTGGCGACAACAAGGCGCTGATGACGCAGCGCGGC TCCCAGGACTCGATCCGCGTCTATGCCGCCATCAGCTCGCCTGACGAGAACTGGGCCGCCACTGTCGGGCTCCGA GGCCGGACGGCGAGCGAGGCAAAGGCCTTTCTGCTGGGCCCCGGTGGGCCGTTTCGCAACTGGGCTGCACCGCTG CGACACCTGCTGGCGACGGTCTGCGACGCTGATAGCCAGGATCACGTCGGACGCGCCATCGACATCATGCCCATG TATGCGCTTCCAGCCGGTCATCTCTGGGCCCGAGGCGATGGCGGCGCGACACTCATAGGCGACGCAGCACACCTG ATGCTCCCCTTTGCCGGCGAGGGAGTCAATCTGGCGCTATGGGATGCTCTCGACCTCGCCCGTCTGCTGGCCGAG ATGCCCGCTGCAAGCGACGCCATGTCCTGGCACAAGGCTCTGGCTCCTCGACTGCGAGCCATGGAGGAGACGATG CAGGCCAGAGCCAAGGACAAGTCGGAGGAGGCGAGACGCAACAAGGACATGATTCTTGGAGACGGAGCGGCCGAT GTGGTGGCAGCCTGGTTCAAGCAGCATCAGTCTGGAGACTGA |
Transcript | >Ophun1|6768 ATGCCCGGCTTCAGGCCCCGAATCGCCATCGCGGGCGGCGGCCCCTCCGGCCTGGCCCTCTCGCTGCTCCTCCGA CGACAGGGCATCGGCAGCACCGTGTACGAGCTGCGGCACAAGCCCCGGCCGGAGGAGCTGGCCGAACCGTCGGGC ATGCTGGACCTGCACGAGGAGTCTGGCCTGACGGTGATGCGCGAATGCGGTCTCTGGGACGAGTTCCAGGCAGCG ACTGGCGACTGCTCCGAGGCAATGCGCGTCTTGCGGTCGGACGGCGTCGAGGTTCACGCAGACGACGGACAGAGC GAGCCGCGACCAGAGATTGCTCGACACGGGCTCATCCGGCTGCTGGCCGAGAAGCTTCCCGGAGACGTCGTCCGA TGGGGCAGCAAGGTGTCGGCGGTGCGGAGGGCCCGTAATCCGGAGACGGGGGCGGTCGAGGCCACAGTCGAGCTC GGTGACAGCGGCTCGGCGACGTACGACCTGGTCATCGGAGCCGACGGCGCCTGGTCTCGCGTCAGGGCGCTCCTC TCGGACACGAAGCCGGCCTACTGCGGAACGCAGATGGTGACGGCGACGCTGCGACACGCAACGACCCTTCACCCG GATCTGGCCGACCTCAGTGGCTCAGGCTCTCTCTGGGCGCTTGGCGACAACAAGGCGCTGATGACGCAGCGCGGC TCCCAGGACTCGATCCGCGTCTATGCCGCCATCAGCTCGCCTGACGAGAACTGGGCCGCCACTGTCGGGCTCCGA GGCCGGACGGCGAGCGAGGCAAAGGCCTTTCTGCTGGGCCCCGGTGGGCCGTTTCGCAACTGGGCTGCACCGCTG CGACACCTGCTGGCGACGGTCTGCGACGCTGATAGCCAGGATCACGTCGGACGCGCCATCGACATCATGCCCATG TATGCGCTTCCAGCCGGTCATCTCTGGGCCCGAGGCGATGGCGGCGCGACACTCATAGGCGACGCAGCACACCTG ATGCTCCCCTTTGCCGGCGAGGGAGTCAATCTGGCGCTATGGGATGCTCTCGACCTCGCCCGTCTGCTGGCCGAG ATGCCCGCTGCAAGCGACGCCATGTCCTGGCACAAGGCTCTGGCTCCTCGACTGCGAGCCATGGAGGAGACGATG CAGGCCAGAGCCAAGGACAAGTCGGAGGAGGCGAGACGCAACAAGGACATGATTCTTGGAGACGGAGCGGCCGAT GTGGTGGCAGCCTGGTTCAAGCAGCATCAGTCTGGAGACTGA |
Gene | >Ophun1|6768 ATGCCCGGCTTCAGGCCCCGAATCGCCATCGCGGGCGGCGGCCCCTCCGGCCTGGCCCTCTCGCTGCTCCTCCGA CGACAGGGCATCGGCAGCACCGTGTACGAGCTGCGGCACAAGCCCCGGCCGGAGGAGCTGGCCGAACCGTCGGGC ATGCTGGACCTGCACGAGGAGTCTGGCCTGACGGTGATGCGCGAATGCGGTCTCTGGGACGAGTTCCAGGCAGCG ACTGGCGACTGCTCCGAGGCAATGCGCGTCTTGCGGTCGGACGGCGTCGAGGTTCACGCAGACGACGGACAGAGC GAGCCGCGACCAGAGATTGCTCGACACGGGCTCATCCGGCTGCTGGCCGAGAAGCTTCCCGGAGACGTCGTCCGA TGGGGCAGCAAGGTGTCGGCGGTGCGGAGGGCCCGTAATCCGGAGACGGGGGCGGTCGAGGCCACAGTCGAGCTC GGTGACAGCGGCTCGGCGACGTACGACCTGGTCATCGGAGCCGACGGCGCCTGGTCTCGCGTCAGGGCGCTCCTC TCGGACACGAAGCCGGCCTACTGCGGAACGCAGATGGTGACGGCGACGCTGCGACACGCAACGACCCTTCACCCG GATCTGGCCGACCTCAGTGGCTCAGGCTCTCTCTGGGCGCTTGGCGACAACAAGGCGCTGATGACGCAGCGCGGC TCCCAGGACTCGATCCGCGTCTATGCCGCCATCAGCTCGCCTGACGAGAACTGGGCCGCCACTGTCGGGCTCCGA GGCCGGACGGCGAGCGAGGCAAAGGCCTTTCTGCTGGGCCCCGGTGGGCCGTTTCGCAACTGGGCTGCACCGCTG CGACACCTGCTGGCGACGGTCTGCGACGCTGATAGCCAGGATCACGTCGGACGCGCCATCGACATCATGCCCATG TATGCGCTTCCAGCCGGTCATCTCTGGGCCCGAGGCGATGGCGGCGCGACACTCATAGGCGACGCAGCACACCTG ATGCTCCCCTTTGCCGGCGAGGGAGTCAATCTGGCGCTATGGGATGCTCTCGACCTCGCCCGTCTGCTGGCCGAG ATGCCCGCTGCAAGCGACGCCATGTCCTGGCACAAGGCTCTGGCTCCTCGACTGCGAGCCATGGAGGAGACGATG CAGGCCAGAGCCAAGGACAAGTCGGAGGAGGCGAGACGCAACAAGGACATGATTCTTGGAGACGGAGCGGCCGAT GTGGTGGCAGCCTGGTTCAAGCAGCATCAGTCTGGAGACTGA |