© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|665 |
| Gene name | |
| Location | Contig_121:202..1417 |
| Strand | + |
| Gene length (bp) | 1215 |
| Transcript length (bp) | 1215 |
| Coding sequence length (bp) | 1215 |
| Protein length (aa) | 405 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.8E-26 | 18 | 353 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.3E-08 | 15 | 127 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 4 | 372 | 9.0E-27 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 10 | 372 | 1.0E-19 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 10 | 370 | 4.0E-18 |
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 10 | 180 | 4.0E-14 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 8 | 136 | 4.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 4 | 372 | 9.0E-27 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 10 | 372 | 1.0E-19 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 10 | 370 | 4.0E-18 |
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 10 | 180 | 4.0E-14 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 8 | 136 | 4.0E-12 |
| sp|P33733|TCR4_SALOR | Tetracycline resistance protein, class D OS=Salmonella ordonez GN=tetA PE=3 SV=1 | 7 | 134 | 2.0E-10 |
| sp|P51564|TCR8_PASMD | Tetracycline resistance protein, class H OS=Pasteurella multocida GN=tetA PE=3 SV=1 | 5 | 137 | 1.0E-09 |
| sp|P51563|TCR7_VIBAN | Tetracycline resistance protein, class G OS=Vibrio anguillarum GN=tetA PE=3 SV=1 | 9 | 289 | 3.0E-09 |
| sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 16 | 127 | 2.0E-07 |
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 16 | 134 | 2.0E-07 |
| sp|D8MQN9|MDTG_ERWBE | Multidrug resistance protein MdtG OS=Erwinia billingiae (strain Eb661) GN=mdtG PE=3 SV=1 | 12 | 143 | 4.0E-07 |
| sp|Q07282|TCR5_ECOLX | Tetracycline resistance protein, class E OS=Escherichia coli GN=tetA PE=3 SV=1 | 10 | 137 | 5.0E-07 |
| sp|P77726|YAJR_ECOLI | Inner membrane transport protein YajR OS=Escherichia coli (strain K12) GN=yajR PE=1 SV=2 | 18 | 122 | 8.0E-07 |
| sp|P02981|TCR3_ECOLX | Tetracycline resistance protein, class C OS=Escherichia coli GN=tetA PE=1 SV=1 | 9 | 126 | 2.0E-06 |
| sp|P02982|TCR1_ECOLX | Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2 | 10 | 124 | 2.0E-06 |
| sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 16 | 144 | 4.0E-06 |
| sp|Q6GIU7|NORA_STAAR | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MRSA252) GN=norA PE=3 SV=1 | 18 | 137 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 47 | 66 | 19 |
| 3 | 71 | 93 | 22 |
| 4 | 106 | 128 | 22 |
| 5 | 148 | 170 | 22 |
| 6 | 203 | 225 | 22 |
| 7 | 240 | 262 | 22 |
| 8 | 271 | 293 | 22 |
| 9 | 303 | 325 | 22 |
| 10 | 338 | 360 | 22 |
| 11 | 375 | 397 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|665 MVQQNGHLADSDVGFYSGLIESCFSLSQMMFLIPWSRLADRIGRKPVLIGTLSGMAIGQALFGLSTSLSAMIAFR SLSGILSGSGVVVRTAIGDVSTVETRAAAYSWFGFAGNLGMFLGPLVGGALADPARTMPRFFGQVDVLIRHPYAL SGLAVAVIIGGSALAAAVGLGETLPEKKLRGHQEEPALSIRQLMACPGVAAGLAIYVHVMLLAFVFAAILPLALY TPIHLGGMACSSAATSVYMAVQGASQALWLLLVFPWLQRRIGTKRVLRLCGLAGPLFYGGFVLMNALLRLDSDVS RRLFWVVGVVVATVGPGVNMAATCAQLVIQEVAPDGRSVGLMNALALTLASAIRSFVPAVSTIVFASGVRSQIIY GYLAWAVLIPLSAALIVMPSLLPDETETN* |
| Coding | >Ophun1|665 ATGGTCCAACAGAATGGCCACCTCGCCGACTCAGACGTCGGATTCTACAGCGGCCTGATAGAAAGCTGCTTCTCC CTATCGCAAATGATGTTCCTAATCCCCTGGTCAAGACTTGCCGATCGAATAGGCCGCAAGCCCGTCCTCATCGGC ACCCTCTCCGGCATGGCCATCGGACAAGCCCTCTTCGGACTATCCACAAGTCTGTCGGCCATGATAGCCTTCCGC TCGTTATCCGGCATCCTCTCCGGCTCGGGCGTCGTCGTCCGGACCGCCATCGGAGATGTCAGCACCGTCGAGACG CGCGCCGCGGCTTACAGCTGGTTCGGCTTCGCCGGCAATCTCGGCATGTTCCTCGGCCCCCTCGTCGGCGGCGCG CTCGCAGATCCGGCCCGGACAATGCCGCGATTCTTCGGACAAGTCGATGTGCTGATCCGGCATCCGTACGCGTTA TCCGGCCTGGCCGTAGCCGTCATCATCGGCGGTTCCGCTCTCGCCGCCGCCGTTGGTCTCGGCGAGACGCTCCCG GAGAAGAAGCTCAGGGGCCACCAAGAGGAGCCAGCCCTGTCTATCCGTCAACTGATGGCCTGTCCCGGTGTAGCA GCAGGGTTGGCCATATACGTGCACGTCATGCTGCTGGCCTTTGTCTTCGCCGCCATCCTCCCGCTGGCCCTGTAC ACGCCCATCCATCTAGGCGGCATGGCCTGCTCTTCAGCGGCCACATCCGTCTACATGGCCGTTCAGGGAGCCAGC CAGGCGCTGTGGCTGCTTCTGGTCTTCCCCTGGCTGCAGCGACGCATCGGCACCAAGCGTGTCCTCCGTCTCTGT GGCTTGGCTGGCCCTCTGTTCTACGGCGGCTTCGTCCTCATGAACGCCCTGCTTCGTCTCGATAGCGACGTCTCT CGTCGTCTCTTCTGGGTCGTCGGCGTTGTTGTAGCCACTGTTGGCCCTGGAGTCAACATGGCTGCGACTTGTGCT CAGCTCGTCATCCAGGAGGTGGCCCCTGATGGCCGTTCCGTTGGACTCATGAATGCGCTGGCCTTGACGCTGGCC AGTGCCATCCGCTCTTTTGTTCCAGCGGTATCGACCATCGTCTTTGCCTCTGGCGTTCGCTCCCAGATCATATAC GGCTATCTGGCCTGGGCAGTACTGATTCCGCTTTCGGCTGCGCTGATCGTCATGCCATCGTTGCTGCCAGACGAG ACGGAAACAAACTGA |
| Transcript | >Ophun1|665 ATGGTCCAACAGAATGGCCACCTCGCCGACTCAGACGTCGGATTCTACAGCGGCCTGATAGAAAGCTGCTTCTCC CTATCGCAAATGATGTTCCTAATCCCCTGGTCAAGACTTGCCGATCGAATAGGCCGCAAGCCCGTCCTCATCGGC ACCCTCTCCGGCATGGCCATCGGACAAGCCCTCTTCGGACTATCCACAAGTCTGTCGGCCATGATAGCCTTCCGC TCGTTATCCGGCATCCTCTCCGGCTCGGGCGTCGTCGTCCGGACCGCCATCGGAGATGTCAGCACCGTCGAGACG CGCGCCGCGGCTTACAGCTGGTTCGGCTTCGCCGGCAATCTCGGCATGTTCCTCGGCCCCCTCGTCGGCGGCGCG CTCGCAGATCCGGCCCGGACAATGCCGCGATTCTTCGGACAAGTCGATGTGCTGATCCGGCATCCGTACGCGTTA TCCGGCCTGGCCGTAGCCGTCATCATCGGCGGTTCCGCTCTCGCCGCCGCCGTTGGTCTCGGCGAGACGCTCCCG GAGAAGAAGCTCAGGGGCCACCAAGAGGAGCCAGCCCTGTCTATCCGTCAACTGATGGCCTGTCCCGGTGTAGCA GCAGGGTTGGCCATATACGTGCACGTCATGCTGCTGGCCTTTGTCTTCGCCGCCATCCTCCCGCTGGCCCTGTAC ACGCCCATCCATCTAGGCGGCATGGCCTGCTCTTCAGCGGCCACATCCGTCTACATGGCCGTTCAGGGAGCCAGC CAGGCGCTGTGGCTGCTTCTGGTCTTCCCCTGGCTGCAGCGACGCATCGGCACCAAGCGTGTCCTCCGTCTCTGT GGCTTGGCTGGCCCTCTGTTCTACGGCGGCTTCGTCCTCATGAACGCCCTGCTTCGTCTCGATAGCGACGTCTCT CGTCGTCTCTTCTGGGTCGTCGGCGTTGTTGTAGCCACTGTTGGCCCTGGAGTCAACATGGCTGCGACTTGTGCT CAGCTCGTCATCCAGGAGGTGGCCCCTGATGGCCGTTCCGTTGGACTCATGAATGCGCTGGCCTTGACGCTGGCC AGTGCCATCCGCTCTTTTGTTCCAGCGGTATCGACCATCGTCTTTGCCTCTGGCGTTCGCTCCCAGATCATATAC GGCTATCTGGCCTGGGCAGTACTGATTCCGCTTTCGGCTGCGCTGATCGTCATGCCATCGTTGCTGCCAGACGAG ACGGAAACAAACTGA |
| Gene | >Ophun1|665 ATGGTCCAACAGAATGGCCACCTCGCCGACTCAGACGTCGGATTCTACAGCGGCCTGATAGAAAGCTGCTTCTCC CTATCGCAAATGATGTTCCTAATCCCCTGGTCAAGACTTGCCGATCGAATAGGCCGCAAGCCCGTCCTCATCGGC ACCCTCTCCGGCATGGCCATCGGACAAGCCCTCTTCGGACTATCCACAAGTCTGTCGGCCATGATAGCCTTCCGC TCGTTATCCGGCATCCTCTCCGGCTCGGGCGTCGTCGTCCGGACCGCCATCGGAGATGTCAGCACCGTCGAGACG CGCGCCGCGGCTTACAGCTGGTTCGGCTTCGCCGGCAATCTCGGCATGTTCCTCGGCCCCCTCGTCGGCGGCGCG CTCGCAGATCCGGCCCGGACAATGCCGCGATTCTTCGGACAAGTCGATGTGCTGATCCGGCATCCGTACGCGTTA TCCGGCCTGGCCGTAGCCGTCATCATCGGCGGTTCCGCTCTCGCCGCCGCCGTTGGTCTCGGCGAGACGCTCCCG GAGAAGAAGCTCAGGGGCCACCAAGAGGAGCCAGCCCTGTCTATCCGTCAACTGATGGCCTGTCCCGGTGTAGCA GCAGGGTTGGCCATATACGTGCACGTCATGCTGCTGGCCTTTGTCTTCGCCGCCATCCTCCCGCTGGCCCTGTAC ACGCCCATCCATCTAGGCGGCATGGCCTGCTCTTCAGCGGCCACATCCGTCTACATGGCCGTTCAGGGAGCCAGC CAGGCGCTGTGGCTGCTTCTGGTCTTCCCCTGGCTGCAGCGACGCATCGGCACCAAGCGTGTCCTCCGTCTCTGT GGCTTGGCTGGCCCTCTGTTCTACGGCGGCTTCGTCCTCATGAACGCCCTGCTTCGTCTCGATAGCGACGTCTCT CGTCGTCTCTTCTGGGTCGTCGGCGTTGTTGTAGCCACTGTTGGCCCTGGAGTCAACATGGCTGCGACTTGTGCT CAGCTCGTCATCCAGGAGGTGGCCCCTGATGGCCGTTCCGTTGGACTCATGAATGCGCTGGCCTTGACGCTGGCC AGTGCCATCCGCTCTTTTGTTCCAGCGGTATCGACCATCGTCTTTGCCTCTGGCGTTCGCTCCCAGATCATATAC GGCTATCTGGCCTGGGCAGTACTGATTCCGCTTTCGGCTGCGCTGATCGTCATGCCATCGTTGCTGCCAGACGAG ACGGAAACAAACTGA |