Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|6572
Gene name
Location	Contig_728:4122..5238
Strand	-
Gene length (bp)	1116
Transcript length (bp)	1116
Coding sequence length (bp)	1116
Protein length (aa)	372

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13432	TPR_16	Tetratricopeptide repeat	1.9E-04	22	82
PF13181	TPR_8	Tetratricopeptide repeat	5.4E-03	53	83
PF13176	TPR_7	Tetratricopeptide repeat	1.6E-02	54	84

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|C8V3W6\|ACL4_EMENI	Probable assembly chaperone of rpl4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN10433 PE=3 SV=1	8	344	5.0E-94
sp\|Q1MTN8\|ACL4_SCHPO	Probable assembly chaperone of rpl4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16D10.01c PE=3 SV=2	32	340	8.0E-39
sp\|Q03771\|ACL4_YEAST	Assembly chaperone of RPL4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ACL4 PE=1 SV=1	62	283	4.0E-18

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|6572 MAPRRPSKKKEPGPSSMLADAETQLGAGNIDEAIALATKALEVTGSGGDFELPALNLLGVLHVENGDEDEARGYL ERAVGLDEEGLVDEKIGGGPEKFLFLAQLSEEGGIDSVRWFERGASALRKQIQALSATASRTAKQQADLEEKQQQ LGGVLCAVAEVYMTDLSWEDDAESRCEALVTEAMMIAPDSAETWQTVANVRVSQERTDEARAALTRSLDLWRDLP PEHPAIPEFPTRIALARLLLETKMEEEALTVLERLVTEDDESVEAWYLGGWCLYVLGEKQQQPRQEQNGGGSEEW KGTWSTARKWLAQCLKLHARLEYEDDRLGDHAVELFESINQELGAMPEGEEDEWEDEDGDDEVDDDEEMRD*
Coding	>Ophun1\|6572 ATGGCGCCCCGTCGACCCAGCAAGAAAAAGGAGCCGGGACCGAGCTCGATGCTGGCGGATGCCGAGACGCAGCTG GGGGCGGGAAATATCGACGAGGCCATTGCACTGGCGACGAAAGCTCTCGAAGTCACGGGTTCAGGCGGCGACTTC GAACTGCCGGCGCTGAATTTGCTGGGCGTGCTGCACGTCGAGAACGGTGACGAGGACGAGGCGCGTGGATACCTG GAGCGGGCGGTCGGCTTAGACGAAGAGGGCCTGGTGGATGAGAAGATTGGAGGCGGGCCGGAGAAGTTTCTCTTC CTGGCGCAACTAAGTGAAGAGGGTGGAATCGATAGTGTGCGATGGTTCGAGCGTGGAGCATCGGCGCTGAGGAAG CAGATACAGGCCCTTTCCGCTACGGCCTCCAGAACAGCCAAGCAGCAGGCCGACCTCGAGGAGAAGCAGCAACAG CTGGGCGGCGTTTTATGCGCCGTGGCCGAGGTCTACATGACGGATCTTTCGTGGGAGGACGACGCAGAGAGCCGG TGCGAGGCGCTCGTCACCGAGGCCATGATGATCGCTCCGGACTCGGCAGAGACGTGGCAGACGGTGGCCAACGTC CGCGTCTCACAGGAGCGCACCGACGAAGCTAGAGCGGCCCTGACGAGGAGTCTGGATCTGTGGAGGGACCTGCCG CCCGAGCACCCTGCCATCCCCGAGTTTCCAACCAGGATCGCTCTCGCGCGGCTGCTCCTCGAGACTAAGATGGAG GAGGAGGCGCTGACGGTACTGGAGAGACTGGTGACGGAGGACGATGAAAGTGTCGAGGCCTGGTACCTCGGTGGC TGGTGTCTGTACGTGTTGGGCGAGAAGCAGCAGCAGCCGCGGCAGGAGCAAAACGGCGGCGGCTCGGAGGAGTGG AAGGGAACGTGGTCAACGGCTCGGAAGTGGCTGGCGCAGTGTCTGAAGCTACACGCGAGGCTGGAGTACGAGGAC GACCGGCTGGGCGACCACGCGGTCGAACTATTCGAGTCGATCAACCAGGAGCTCGGGGCGATGCCGGAGGGCGAG GAGGATGAATGGGAGGACGAGGACGGCGACGATGAGGTTGATGATGATGAGGAGATGCGGGACTGA
Transcript	>Ophun1\|6572 ATGGCGCCCCGTCGACCCAGCAAGAAAAAGGAGCCGGGACCGAGCTCGATGCTGGCGGATGCCGAGACGCAGCTG GGGGCGGGAAATATCGACGAGGCCATTGCACTGGCGACGAAAGCTCTCGAAGTCACGGGTTCAGGCGGCGACTTC GAACTGCCGGCGCTGAATTTGCTGGGCGTGCTGCACGTCGAGAACGGTGACGAGGACGAGGCGCGTGGATACCTG GAGCGGGCGGTCGGCTTAGACGAAGAGGGCCTGGTGGATGAGAAGATTGGAGGCGGGCCGGAGAAGTTTCTCTTC CTGGCGCAACTAAGTGAAGAGGGTGGAATCGATAGTGTGCGATGGTTCGAGCGTGGAGCATCGGCGCTGAGGAAG CAGATACAGGCCCTTTCCGCTACGGCCTCCAGAACAGCCAAGCAGCAGGCCGACCTCGAGGAGAAGCAGCAACAG CTGGGCGGCGTTTTATGCGCCGTGGCCGAGGTCTACATGACGGATCTTTCGTGGGAGGACGACGCAGAGAGCCGG TGCGAGGCGCTCGTCACCGAGGCCATGATGATCGCTCCGGACTCGGCAGAGACGTGGCAGACGGTGGCCAACGTC CGCGTCTCACAGGAGCGCACCGACGAAGCTAGAGCGGCCCTGACGAGGAGTCTGGATCTGTGGAGGGACCTGCCG CCCGAGCACCCTGCCATCCCCGAGTTTCCAACCAGGATCGCTCTCGCGCGGCTGCTCCTCGAGACTAAGATGGAG GAGGAGGCGCTGACGGTACTGGAGAGACTGGTGACGGAGGACGATGAAAGTGTCGAGGCCTGGTACCTCGGTGGC TGGTGTCTGTACGTGTTGGGCGAGAAGCAGCAGCAGCCGCGGCAGGAGCAAAACGGCGGCGGCTCGGAGGAGTGG AAGGGAACGTGGTCAACGGCTCGGAAGTGGCTGGCGCAGTGTCTGAAGCTACACGCGAGGCTGGAGTACGAGGAC GACCGGCTGGGCGACCACGCGGTCGAACTATTCGAGTCGATCAACCAGGAGCTCGGGGCGATGCCGGAGGGCGAG GAGGATGAATGGGAGGACGAGGACGGCGACGATGAGGTTGATGATGATGAGGAGATGCGGGACTGA
Gene	>Ophun1\|6572 ATGGCGCCCCGTCGACCCAGCAAGAAAAAGGAGCCGGGACCGAGCTCGATGCTGGCGGATGCCGAGACGCAGCTG GGGGCGGGAAATATCGACGAGGCCATTGCACTGGCGACGAAAGCTCTCGAAGTCACGGGTTCAGGCGGCGACTTC GAACTGCCGGCGCTGAATTTGCTGGGCGTGCTGCACGTCGAGAACGGTGACGAGGACGAGGCGCGTGGATACCTG GAGCGGGCGGTCGGCTTAGACGAAGAGGGCCTGGTGGATGAGAAGATTGGAGGCGGGCCGGAGAAGTTTCTCTTC CTGGCGCAACTAAGTGAAGAGGGTGGAATCGATAGTGTGCGATGGTTCGAGCGTGGAGCATCGGCGCTGAGGAAG CAGATACAGGCCCTTTCCGCTACGGCCTCCAGAACAGCCAAGCAGCAGGCCGACCTCGAGGAGAAGCAGCAACAG CTGGGCGGCGTTTTATGCGCCGTGGCCGAGGTCTACATGACGGATCTTTCGTGGGAGGACGACGCAGAGAGCCGG TGCGAGGCGCTCGTCACCGAGGCCATGATGATCGCTCCGGACTCGGCAGAGACGTGGCAGACGGTGGCCAACGTC CGCGTCTCACAGGAGCGCACCGACGAAGCTAGAGCGGCCCTGACGAGGAGTCTGGATCTGTGGAGGGACCTGCCG CCCGAGCACCCTGCCATCCCCGAGTTTCCAACCAGGATCGCTCTCGCGCGGCTGCTCCTCGAGACTAAGATGGAG GAGGAGGCGCTGACGGTACTGGAGAGACTGGTGACGGAGGACGATGAAAGTGTCGAGGCCTGGTACCTCGGTGGC TGGTGTCTGTACGTGTTGGGCGAGAAGCAGCAGCAGCCGCGGCAGGAGCAAAACGGCGGCGGCTCGGAGGAGTGG AAGGGAACGTGGTCAACGGCTCGGAAGTGGCTGGCGCAGTGTCTGAAGCTACACGCGAGGCTGGAGTACGAGGAC GACCGGCTGGGCGACCACGCGGTCGAACTATTCGAGTCGATCAACCAGGAGCTCGGGGCGATGCCGGAGGGCGAG GAGGATGAATGGGAGGACGAGGACGGCGACGATGAGGTTGATGATGATGAGGAGATGCGGGACTGA

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