Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|656
Gene name
LocationContig_1200:1682..3079
Strand-
Gene length (bp)1397
Transcript length (bp)993
Coding sequence length (bp)993
Protein length (aa) 331

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01822 WSC WSC domain 1.0E-11 27 99

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P38739|WSC4_YEAST Cell wall integrity and stress response component 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WSC4 PE=1 SV=1 25 108 2.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 208 230 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|656
MAASSIRGLCPLFLLLACVSALDFNLCASFNTADTPQNISIYQTNGLCHDFCLQNNKAYGITQGNSCWCSDYTPA
KDSQVDKSKCDRPCPAYPDEFCGGQGVFGYLALNNIMPSGTRGPSKPDKPQPTSPSPPSSTDEGSASDAPSSTPS
PSSSASPTSIIQTVTADGRVQYITVMPTPSASASANTTGKETADVRTEQTGLGKGAVVGLTMGIIAAAAATAAMG
LYMWVQRKKRRGQDYPDDPSIRGSSSGILGGRPEVSGIPGSPESTGNRSSTLQIDPRMDPFKQGLYARSGSHESI
NTLRDEHDYSRRIQQPKVLRAMNPDPVAED*
Coding >Ophun1|656
ATGGCAGCCTCTTCCATCCGCGGCCTCTGCCCGCTCTTCCTACTGCTGGCCTGCGTCTCCGCCCTCGACTTCAAT
CTCTGTGCCAGCTTCAACACGGCAGACACGCCTCAGAACATTAGCATATACCAGACCAATGGCCTCTGCCACGAC
TTCTGCCTACAGAACAACAAGGCCTATGGCATCACCCAAGGAAACTCGTGCTGGTGCTCCGACTACACGCCCGCC
AAAGACAGCCAGGTCGACAAGAGCAAATGCGACCGCCCTTGTCCCGCCTACCCCGACGAGTTCTGCGGCGGCCAG
GGCGTCTTTGGATACCTCGCTCTCAACAACATCATGCCCTCGGGCACAAGGGGCCCTTCCAAACCCGACAAGCCC
CAGCCGACTTCGCCTTCTCCTCCCTCGTCCACCGATGAGGGCTCCGCCAGCGATGCCCCTTCCTCTACCCCCTCG
CCGTCATCGTCGGCATCACCAACCTCCATCATCCAAACCGTCACCGCCGACGGCAGAGTCCAGTACATAACCGTC
ATGCCGACGCCATCGGCCTCGGCCTCGGCCAACACTACAGGCAAGGAAACAGCTGACGTCCGAACCGAACAGACG
GGCCTCGGCAAGGGAGCAGTCGTCGGACTCACCATGGGCATAATAGCCGCCGCCGCCGCCACCGCCGCCATGGGC
CTCTACATGTGGGTTCAGCGCAAGAAGCGCCGCGGCCAAGACTATCCCGACGACCCCAGCATCCGCGGCAGCTCC
TCGGGCATCCTCGGCGGCCGCCCCGAAGTATCGGGCATCCCCGGCTCGCCCGAGTCGACGGGCAACCGAAGCAGC
ACCCTGCAAATCGACCCGCGAATGGACCCCTTCAAGCAGGGTCTCTACGCCCGCAGCGGCAGCCACGAGAGCATC
AACACGCTGCGCGACGAGCACGACTACTCGAGGAGGATCCAGCAGCCCAAGGTTCTGCGAGCCATGAACCCCGAC
CCGGTCGCCGAAGACTGA
Transcript >Ophun1|656
ATGGCAGCCTCTTCCATCCGCGGCCTCTGCCCGCTCTTCCTACTGCTGGCCTGCGTCTCCGCCCTCGACTTCAAT
CTCTGTGCCAGCTTCAACACGGCAGACACGCCTCAGAACATTAGCATATACCAGACCAATGGCCTCTGCCACGAC
TTCTGCCTACAGAACAACAAGGCCTATGGCATCACCCAAGGAAACTCGTGCTGGTGCTCCGACTACACGCCCGCC
AAAGACAGCCAGGTCGACAAGAGCAAATGCGACCGCCCTTGTCCCGCCTACCCCGACGAGTTCTGCGGCGGCCAG
GGCGTCTTTGGATACCTCGCTCTCAACAACATCATGCCCTCGGGCACAAGGGGCCCTTCCAAACCCGACAAGCCC
CAGCCGACTTCGCCTTCTCCTCCCTCGTCCACCGATGAGGGCTCCGCCAGCGATGCCCCTTCCTCTACCCCCTCG
CCGTCATCGTCGGCATCACCAACCTCCATCATCCAAACCGTCACCGCCGACGGCAGAGTCCAGTACATAACCGTC
ATGCCGACGCCATCGGCCTCGGCCTCGGCCAACACTACAGGCAAGGAAACAGCTGACGTCCGAACCGAACAGACG
GGCCTCGGCAAGGGAGCAGTCGTCGGACTCACCATGGGCATAATAGCCGCCGCCGCCGCCACCGCCGCCATGGGC
CTCTACATGTGGGTTCAGCGCAAGAAGCGCCGCGGCCAAGACTATCCCGACGACCCCAGCATCCGCGGCAGCTCC
TCGGGCATCCTCGGCGGCCGCCCCGAAGTATCGGGCATCCCCGGCTCGCCCGAGTCGACGGGCAACCGAAGCAGC
ACCCTGCAAATCGACCCGCGAATGGACCCCTTCAAGCAGGGTCTCTACGCCCGCAGCGGCAGCCACGAGAGCATC
AACACGCTGCGCGACGAGCACGACTACTCGAGGAGGATCCAGCAGCCCAAGGTTCTGCGAGCCATGAACCCCGAC
CCGGTCGCCGAAGACTGA
Gene >Ophun1|656
ATGGCAGCCTCTTCCATCCGCGGCCTCTGCCCGCTCTTCCTACTGCTGGCCTGCGTCTCCGCCCTCGACTTCAAT
CTCTGTGCCAGCTTCAACACGGCAGACACGCCTCAGAGTTGGTCACCACCCTCGCTCCCTTTTCCGTCTTGTATC
CGTGGGCTGACCTTTTCATTCCATCAGACATTAGCATATACCAGACCAATGGCCTCTGCCACGACTTCTGCCTAC
AGAACAACAAGGCCTATGGCATCACCCAAGGAAACTCGTGCTGGTGCTCCGACTACACGCCCGCCAAAGACAGCC
AGGTCGACAAGAGCAAATGCGACCGCCCTTGTCCCGCCTACCCCGACGAGTTCTGCGGCGGCCAGGGCGTCTTTG
GATACCTCGCTCTCAACAACATCATGCCCTCGGGCACAAGGGGCCCTTCCAAACCCGACAAGCCCCAGCCGACTT
CGCCTTCTCCTCCCTCGGTCAGTTCCTCGTCCCCCTTTTCCTTGCGTTCTCTTCGTCATTCCTTGCTCTCGTCGT
GTCACCGCTTCCGTCGCCGCCACCGCCGCCCAACCACCTCCATCTGACCTCCAGACCAACACGGCGAGGCTAGGC
TTATCTGTCCCAACTCCAGGCTGAAACCCCGACGGCGACGGCGTGGGTCACCAAGACTGTGCAGGACACAGTGAC
CCCCATGCATCCTCCTCCTCCTCCTCCTCCGTCCAGCTCGAATGTCGTCCCCCGTTCTGTATGCTCAAGCTTGTT
TTATTGCTTTCTTTCGCCTCCGCTGTCGAGAACCCGAAGCTGACTTTGGCAAACAGTCCACCGATGAGGGCTCCG
CCAGCGATGCCCCTTCCTCTACCCCCTCGCCGTCATCGTCGGCATCACCAACCTCCATCATCCAAACCGTCACCG
CCGACGGCAGAGTCCAGTACATAACCGTCATGCCGACGCCATCGGCCTCGGCCTCGGCCAACACTACAGGCAAGG
AAACAGCTGACGTCCGAACCGAACAGACGGGCCTCGGCAAGGGAGCAGTCGTCGGACTCACCATGGGCATAATAG
CCGCCGCCGCCGCCACCGCCGCCATGGGCCTCTACATGTGGGTTCAGCGCAAGAAGCGCCGCGGCCAAGACTATC
CCGACGACCCCAGCATCCGCGGCAGCTCCTCGGGCATCCTCGGCGGCCGCCCCGAAGTATCGGGCATCCCCGGCT
CGCCCGAGTCGACGGGCAACCGAAGCAGCACCCTGCAAATCGACCCGCGAATGGACCCCTTCAAGCAGGGTCTCT
ACGCCCGCAGCGGCAGCCACGAGAGCATCAACACGCTGCGCGACGAGCACGACTACTCGAGGAGGATCCAGCAGC
CCAAGGTTCTGCGAGCCATGAACCCCGACCCGGTCGCCGAAGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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