Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|6520
Gene name
LocationContig_716:3867..4769
Strand+
Gene length (bp)902
Transcript length (bp)846
Coding sequence length (bp)846
Protein length (aa) 282

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08297 U3_snoRNA_assoc U3 snoRNA associated 4.0E-09 181 267

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0030515 snoRNA binding Yes
GO:0006364 rRNA processing Yes
GO:0003723 RNA binding No
GO:0044237 cellular metabolic process No
GO:0044238 primary metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0009987 cellular process No
GO:0006396 RNA processing No
GO:0008152 metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0006725 cellular aromatic compound metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0016072 rRNA metabolic process No
GO:0034470 ncRNA processing No
GO:0034660 ncRNA metabolic process No
GO:0003674 molecular_function No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0008150 biological_process No
GO:0005488 binding No
GO:0003676 nucleic acid binding No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0016070 RNA metabolic process No
GO:0006807 nitrogen compound metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3748
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1310
Ophiocordyceps australis map64 (Brazil) OphauB2|5174
Ophiocordyceps camponoti-floridani Ophcf2|06523
Ophiocordyceps camponoti-rufipedis Ophun1|6520 (this protein)
Ophiocordyceps kimflemingae Ophio5|4384
Ophiocordyceps subramaniannii Hirsu2|7304

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|6520
MAQLRKRKAGQEPATEKAAAADTKPKRQRLPLRAKAGEELPATEKGTLITFDDDKVNQDVKVVSAPTIVAPKVED
LAANNDDDDDAAPEVISTVKAATELKLSEQAAQKAVRRQAAAEKQKRRERDSLLKKQAAERKRVARDQPDAAIVP
PQDDGQDETSNIPTVSSGKRQPGRVAVPDVLPMELLDESSSEDDEEQVKTRRRTDVSKQPEKRTIANVEGRLTRL
DTAPRDKVVKSTVYRVAAKADERLVPKAGERSLNIRERLLRRKRMPATDHMLLTRK*
Coding >Ophun1|6520
ATGGCACAGCTTCGAAAGAGAAAGGCCGGACAAGAGCCGGCGACGGAAAAGGCTGCCGCCGCCGACACGAAGCCC
AAGCGCCAGAGGCTCCCCTTGCGCGCAAAGGCCGGCGAAGAGCTGCCAGCGACGGAAAAGGGCACGCTCATTACC
TTTGACGACGACAAGGTCAATCAGGATGTGAAGGTTGTCTCTGCGCCTACGATTGTGGCGCCCAAAGTCGAGGAT
TTAGCAGCGAACAACGACGACGATGACGATGCTGCACCTGAGGTCATCTCTACGGTGAAGGCGGCGACGGAGCTC
AAATTATCTGAGCAGGCCGCTCAAAAGGCCGTCAGAAGACAAGCGGCCGCAGAGAAGCAGAAGCGTCGGGAGCGC
GACTCCCTCCTCAAGAAACAAGCAGCAGAACGCAAGCGGGTGGCTCGCGATCAGCCGGACGCAGCCATTGTCCCG
CCGCAAGATGACGGCCAAGATGAGACGAGCAACATACCGACCGTCTCCAGCGGGAAAAGACAGCCAGGGAGGGTG
GCGGTCCCGGACGTCCTCCCCATGGAGCTCCTCGATGAATCTTCCAGCGAGGACGATGAGGAGCAGGTTAAAACG
CGGAGGCGGACCGACGTCTCCAAACAGCCCGAGAAGCGGACCATTGCCAATGTGGAGGGCAGATTGACGCGGTTG
GACACAGCGCCGCGCGATAAAGTGGTCAAGTCTACGGTATATCGCGTCGCCGCCAAGGCAGACGAAAGACTTGTG
CCCAAGGCCGGCGAGCGGTCGCTGAATATCAGGGAAAGATTGCTCAGGAGGAAGAGGATGCCGGCAACGGACCAC
ATGCTTCTGACCAGGAAGTAG
Transcript >Ophun1|6520
ATGGCACAGCTTCGAAAGAGAAAGGCCGGACAAGAGCCGGCGACGGAAAAGGCTGCCGCCGCCGACACGAAGCCC
AAGCGCCAGAGGCTCCCCTTGCGCGCAAAGGCCGGCGAAGAGCTGCCAGCGACGGAAAAGGGCACGCTCATTACC
TTTGACGACGACAAGGTCAATCAGGATGTGAAGGTTGTCTCTGCGCCTACGATTGTGGCGCCCAAAGTCGAGGAT
TTAGCAGCGAACAACGACGACGATGACGATGCTGCACCTGAGGTCATCTCTACGGTGAAGGCGGCGACGGAGCTC
AAATTATCTGAGCAGGCCGCTCAAAAGGCCGTCAGAAGACAAGCGGCCGCAGAGAAGCAGAAGCGTCGGGAGCGC
GACTCCCTCCTCAAGAAACAAGCAGCAGAACGCAAGCGGGTGGCTCGCGATCAGCCGGACGCAGCCATTGTCCCG
CCGCAAGATGACGGCCAAGATGAGACGAGCAACATACCGACCGTCTCCAGCGGGAAAAGACAGCCAGGGAGGGTG
GCGGTCCCGGACGTCCTCCCCATGGAGCTCCTCGATGAATCTTCCAGCGAGGACGATGAGGAGCAGGTTAAAACG
CGGAGGCGGACCGACGTCTCCAAACAGCCCGAGAAGCGGACCATTGCCAATGTGGAGGGCAGATTGACGCGGTTG
GACACAGCGCCGCGCGATAAAGTGGTCAAGTCTACGGTATATCGCGTCGCCGCCAAGGCAGACGAAAGACTTGTG
CCCAAGGCCGGCGAGCGGTCGCTGAATATCAGGGAAAGATTGCTCAGGAGGAAGAGGATGCCGGCAACGGACCAC
ATGCTTCTGACCAGGAAGTAG
Gene >Ophun1|6520
ATGGCACAGCTTCGAAAGAGAAAGGCCGGACAAGAGCCGGCGACGGAAAAGGCTGCCGCCGCCGACACGAAGCCC
AAGCGCCAGAGGCTCCCCTTGCGCGCAAAGGCCGGCGAAGAGCTGCCAGCGACGGAAAAGGGCACGCTCATTACC
TTTGACGACGACAAGGTCAATCAGGATGTGAAGGTTGTCTCTGCGCCTACGATTGTGGCGCCCAAAGTCGAGGAT
TTAGCAGCGAACAACGACGACGATGACGATGCTGCACCTGAGGTCATCTCTACGGTGAAGGCGGCGACGGAGCTC
AAATTATCTGAGCAGGCCGCTCAAAAGGCCGTCAGAAGGTAGATTCTTCCACACTCGTGGCGAAATACTGCGACT
GATGCGGTTCGGCTGCCAGACAAGCGGCCGCAGAGAAGCAGAAGCGTCGGGAGCGCGACTCCCTCCTCAAGAAAC
AAGCAGCAGAACGCAAGCGGGTGGCTCGCGATCAGCCGGACGCAGCCATTGTCCCGCCGCAAGATGACGGCCAAG
ATGAGACGAGCAACATACCGACCGTCTCCAGCGGGAAAAGACAGCCAGGGAGGGTGGCGGTCCCGGACGTCCTCC
CCATGGAGCTCCTCGATGAATCTTCCAGCGAGGACGATGAGGAGCAGGTTAAAACGCGGAGGCGGACCGACGTCT
CCAAACAGCCCGAGAAGCGGACCATTGCCAATGTGGAGGGCAGATTGACGCGGTTGGACACAGCGCCGCGCGATA
AAGTGGTCAAGTCTACGGTATATCGCGTCGCCGCCAAGGCAGACGAAAGACTTGTGCCCAAGGCCGGCGAGCGGT
CGCTGAATATCAGGGAAAGATTGCTCAGGAGGAAGAGGATGCCGGCAACGGACCACATGCTTCTGACCAGGAAGT
AG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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