© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|6517 |
| Gene name | |
| Location | Contig_715:7075..7888 |
| Strand | + |
| Gene length (bp) | 813 |
| Transcript length (bp) | 699 |
| Coding sequence length (bp) | 699 |
| Protein length (aa) | 233 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06916 | FAM210A-B_dom | FAM210A/B-like domain | 1.7E-25 | 77 | 216 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9URV4|YBL7_SCHPO | Uncharacterized protein C106.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC106.07c PE=4 SV=1 | 71 | 222 | 1.0E-20 |
| sp|P37293|NAT2_YEAST | N-terminal acetyltransferase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NAT2 PE=1 SV=2 | 12 | 232 | 2.0E-17 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 86 | 108 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|6517 MFALARGSRHPAATGVWKRLFSLETRKTAKGSRQWRSWPMRYDAKHTLQRRAFNLSAWRRTAGDAGKAPQRLSLG ARLKKLSKEYGWSAVGVYLALSVLDFPFCFLLVKVVGTEKIGKMEHYIVSTLSRLIPESMMQRWRAYRHGTADSQ QQPQEQQQQQTGSDGGAATVVGWGVEEAQRSNDEEASLATQLALAYAIHKSFIFIRVPLTAAVTPKVVKVLRSWG WNIGKRR* |
| Coding | >Ophun1|6517 ATGTTTGCCCTCGCCAGAGGGAGCCGGCATCCGGCCGCAACCGGCGTGTGGAAGAGGCTGTTTAGCCTCGAGACG AGAAAGACGGCCAAGGGGTCGAGACAATGGCGCAGTTGGCCGATGCGCTACGATGCAAAGCACACGTTGCAACGA CGGGCCTTTAACCTGTCGGCCTGGAGACGCACCGCCGGCGACGCTGGAAAGGCGCCGCAGAGGTTATCGCTGGGC GCGAGGCTGAAGAAGCTCTCCAAGGAATACGGATGGTCGGCGGTGGGCGTCTATCTGGCCCTCAGCGTCTTAGAC TTTCCCTTTTGCTTTCTGCTCGTCAAGGTGGTTGGCACGGAGAAGATTGGCAAAATGGAGCACTACATTGTCTCT ACCCTGTCGAGATTAATACCCGAATCCATGATGCAACGGTGGCGCGCGTATCGACACGGCACGGCCGACAGCCAG CAGCAACCACAAGAGCAACAGCAGCAGCAGACGGGCAGTGACGGCGGGGCGGCGACAGTGGTTGGCTGGGGGGTG GAGGAGGCGCAACGCAGCAACGACGAGGAAGCCAGTTTGGCGACGCAGCTGGCGCTCGCCTACGCCATCCACAAG AGCTTCATCTTTATCCGGGTGCCGCTGACGGCGGCGGTGACGCCCAAGGTGGTCAAGGTGCTGAGGAGTTGGGGG TGGAACATTGGCAAGCGACGATGA |
| Transcript | >Ophun1|6517 ATGTTTGCCCTCGCCAGAGGGAGCCGGCATCCGGCCGCAACCGGCGTGTGGAAGAGGCTGTTTAGCCTCGAGACG AGAAAGACGGCCAAGGGGTCGAGACAATGGCGCAGTTGGCCGATGCGCTACGATGCAAAGCACACGTTGCAACGA CGGGCCTTTAACCTGTCGGCCTGGAGACGCACCGCCGGCGACGCTGGAAAGGCGCCGCAGAGGTTATCGCTGGGC GCGAGGCTGAAGAAGCTCTCCAAGGAATACGGATGGTCGGCGGTGGGCGTCTATCTGGCCCTCAGCGTCTTAGAC TTTCCCTTTTGCTTTCTGCTCGTCAAGGTGGTTGGCACGGAGAAGATTGGCAAAATGGAGCACTACATTGTCTCT ACCCTGTCGAGATTAATACCCGAATCCATGATGCAACGGTGGCGCGCGTATCGACACGGCACGGCCGACAGCCAG CAGCAACCACAAGAGCAACAGCAGCAGCAGACGGGCAGTGACGGCGGGGCGGCGACAGTGGTTGGCTGGGGGGTG GAGGAGGCGCAACGCAGCAACGACGAGGAAGCCAGTTTGGCGACGCAGCTGGCGCTCGCCTACGCCATCCACAAG AGCTTCATCTTTATCCGGGTGCCGCTGACGGCGGCGGTGACGCCCAAGGTGGTCAAGGTGCTGAGGAGTTGGGGG TGGAACATTGGCAAGCGACGATGA |
| Gene | >Ophun1|6517 ATGTTTGCCCTCGCCAGAGGGAGCCGGCATCCGGCCGCAACCGGCGTGTGGAAGAGGCTGTTTAGCCTCGAGACG AGAAAGACGGCCAAGGGGTCGAGACAATGGCGCAGTTGGCCGATGCGCTACGATGCAAAGCACACGTTGCAACGA CGGGCCTTTAACCTGTCGGCCTGGAGACGCACCGCCGGCGACGCTGGAAAGGCGCCGCAGAGGTTATCGCTGGGC GCGAGGCTGAAGAAGCTCTCCAAGGAATACGGATGGTCGGCGGTGGGCGTCTATCTGGCCCTCAGCGTCTTAGAC TTTCCCTTTTGCTTTCTGCTCGTCAAGGTGGTTGGCACGGAGAAGATTGGTATGTCGATACTCTGTCCTTTGTTC TTGGCTGGCGGCTCACACGGCGGCTCCGAGCAAAGGCAAAATGGAGCACTACATTGTCTCTACCCTGTCGAGATT AATACCCGAATCCATGATGCAACGGTGGCGCGCGTATCGACACGGCACGGCCGACAGCCAGCAGCAACCACAAGA GCAACAGCAGCAGCAGACGGGCAGTGACGGCGGGGCGGCGACAGTGGTTGGCTGGGGGGTGGAGGAGGCGCAACG CAGCAACGACGAGGAAGCCAGTAGGTTGTACGCAGGGTCGTCGCAGGACAGGAGACGCTGACGGAGCGGACAGGT TTGGCGACGCAGCTGGCGCTCGCCTACGCCATCCACAAGAGCTTCATCTTTATCCGGGTGCCGCTGACGGCGGCG GTGACGCCCAAGGTGGTCAAGGTGCTGAGGAGTTGGGGGTGGAACATTGGCAAGCGACGATGA |