Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|6506
Gene name
Location	Contig_712:6735..8117
Strand	+
Gene length (bp)	1382
Transcript length (bp)	1320
Coding sequence length (bp)	1320
Protein length (aa)	440

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00383	dCMP_cyt_deam_1	Cytidine and deoxycytidylate deaminase zinc-binding region	5.2E-09	232	383

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9P7N4\|TAD3_SCHPO	tRNA-specific adenosine deaminase subunit tad3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tad3 PE=3 SV=1	149	439	2.0E-21
sp\|Q9URQ3\|TAD3_YEAST	tRNA-specific adenosine deaminase subunit TAD3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAD3 PE=1 SV=1	183	422	3.0E-12

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 16	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|6506 MGALVMLDRPAAVTAVAAVGAKKTDNDSRGAGDGADSQPGRRSGILPNPLVDELSKSCAGRGVLIPLKTTQEVRQ DHVIVQAYMTRVPTKSANDVIMAVRSLRPEGSANPLPHLRTCAKPNDLPAHLKTQLMNDTAAGRQIHTSKSNWIY VIVGETKDYDKDEVLRVLSELEAVGQNVFVASIPIPLLPPTSQVQAAMWSSQFWPTVYRKNNPLGPHPSVVGRGT DDIKDDASVWMALAHEVAREAKRAGIGEAMGAVIVQRSDRGAELVGLAGDARRHQASVRGFGNNPMTHCVVRAIS MVAQKLVRHEWRAVGMPLTTPNLAYDAFQDRPLLEMERTCLAQEHPNKDGYLCHGLELYVTHEPCVACSMGILHS RMGKVAFCKHMPRTGGLSSDDRPDGGGRGLGLFWRRELNWSLLAWEWERDGVAGLPSVDPTTHV*
Coding	>Ophun1\|6506 ATGGGAGCCTTGGTGATGTTGGACCGGCCCGCTGCCGTCACCGCCGTCGCCGCCGTCGGAGCGAAGAAGACGGAC AACGACAGCCGAGGCGCCGGCGACGGGGCCGACAGCCAGCCCGGGCGGCGGTCGGGAATCCTGCCCAATCCGCTG GTGGACGAGCTGAGCAAGTCGTGTGCCGGGCGCGGCGTTTTGATCCCGCTCAAGACGACGCAGGAGGTGCGTCAG GACCATGTCATTGTCCAAGCGTACATGACGAGGGTGCCGACCAAGTCGGCCAACGACGTGATCATGGCAGTTCGC TCGTTGCGACCTGAGGGCAGCGCTAACCCCCTGCCCCATCTCCGGACGTGCGCGAAGCCCAACGATCTTCCAGCT CACTTGAAGACGCAGCTGATGAACGACACGGCAGCCGGGCGACAGATTCATACGTCCAAGTCGAACTGGATCTAC GTCATCGTGGGTGAGACCAAGGACTATGACAAGGACGAGGTGTTGCGGGTGCTGTCGGAGCTCGAGGCCGTGGGA CAAAACGTGTTCGTGGCCAGCATCCCGATTCCACTGCTGCCACCGACTTCGCAGGTGCAGGCGGCCATGTGGTCG TCGCAATTCTGGCCCACGGTGTATCGCAAGAACAACCCTCTGGGACCGCACCCGAGCGTGGTGGGACGAGGGACG GACGACATCAAGGACGACGCGTCGGTGTGGATGGCGCTTGCGCACGAGGTGGCACGCGAGGCCAAACGGGCAGGC ATCGGCGAGGCCATGGGGGCCGTCATCGTGCAGCGAAGCGACCGGGGCGCCGAGTTGGTCGGGCTGGCGGGAGAC GCGCGACGGCACCAGGCTTCGGTCCGGGGCTTCGGCAACAACCCGATGACGCACTGCGTGGTGCGGGCCATCAGC ATGGTGGCGCAGAAGCTGGTGCGGCACGAGTGGAGGGCTGTCGGGATGCCGTTGACGACGCCGAACCTAGCATAC GACGCGTTCCAGGACCGGCCGCTGCTGGAGATGGAGCGGACGTGCCTGGCACAGGAGCACCCCAACAAGGACGGC TACCTCTGCCACGGTCTGGAGCTCTACGTGACGCACGAGCCGTGCGTGGCTTGCTCGATGGGCATCCTCCACTCG CGGATGGGCAAAGTGGCATTTTGCAAGCACATGCCGCGCACCGGCGGGCTCAGCTCCGACGACCGACCGGACGGG GGGGGACGAGGCCTGGGCCTGTTTTGGCGACGAGAGCTCAACTGGAGCTTGCTGGCGTGGGAGTGGGAGCGCGAT GGAGTTGCCGGCCTGCCGTCCGTGGACCCGACCACTCATGTTTAG
Transcript	>Ophun1\|6506 ATGGGAGCCTTGGTGATGTTGGACCGGCCCGCTGCCGTCACCGCCGTCGCCGCCGTCGGAGCGAAGAAGACGGAC AACGACAGCCGAGGCGCCGGCGACGGGGCCGACAGCCAGCCCGGGCGGCGGTCGGGAATCCTGCCCAATCCGCTG GTGGACGAGCTGAGCAAGTCGTGTGCCGGGCGCGGCGTTTTGATCCCGCTCAAGACGACGCAGGAGGTGCGTCAG GACCATGTCATTGTCCAAGCGTACATGACGAGGGTGCCGACCAAGTCGGCCAACGACGTGATCATGGCAGTTCGC TCGTTGCGACCTGAGGGCAGCGCTAACCCCCTGCCCCATCTCCGGACGTGCGCGAAGCCCAACGATCTTCCAGCT CACTTGAAGACGCAGCTGATGAACGACACGGCAGCCGGGCGACAGATTCATACGTCCAAGTCGAACTGGATCTAC GTCATCGTGGGTGAGACCAAGGACTATGACAAGGACGAGGTGTTGCGGGTGCTGTCGGAGCTCGAGGCCGTGGGA CAAAACGTGTTCGTGGCCAGCATCCCGATTCCACTGCTGCCACCGACTTCGCAGGTGCAGGCGGCCATGTGGTCG TCGCAATTCTGGCCCACGGTGTATCGCAAGAACAACCCTCTGGGACCGCACCCGAGCGTGGTGGGACGAGGGACG GACGACATCAAGGACGACGCGTCGGTGTGGATGGCGCTTGCGCACGAGGTGGCACGCGAGGCCAAACGGGCAGGC ATCGGCGAGGCCATGGGGGCCGTCATCGTGCAGCGAAGCGACCGGGGCGCCGAGTTGGTCGGGCTGGCGGGAGAC GCGCGACGGCACCAGGCTTCGGTCCGGGGCTTCGGCAACAACCCGATGACGCACTGCGTGGTGCGGGCCATCAGC ATGGTGGCGCAGAAGCTGGTGCGGCACGAGTGGAGGGCTGTCGGGATGCCGTTGACGACGCCGAACCTAGCATAC GACGCGTTCCAGGACCGGCCGCTGCTGGAGATGGAGCGGACGTGCCTGGCACAGGAGCACCCCAACAAGGACGGC TACCTCTGCCACGGTCTGGAGCTCTACGTGACGCACGAGCCGTGCGTGGCTTGCTCGATGGGCATCCTCCACTCG CGGATGGGCAAAGTGGCATTTTGCAAGCACATGCCGCGCACCGGCGGGCTCAGCTCCGACGACCGACCGGACGGG GGGGGACGAGGCCTGGGCCTGTTTTGGCGACGAGAGCTCAACTGGAGCTTGCTGGCGTGGGAGTGGGAGCGCGAT GGAGTTGCCGGCCTGCCGTCCGTGGACCCGACCACTCATGTTTAG
Gene	>Ophun1\|6506 ATGGGAGCCTTGGTGATGTTGGACCGGCCCGCTGCCGTCACCGCCGTCGCCGCCGTCGGAGCGAAGAAGACGGAC AACGACAGCCGAGGCGCCGGCGACGGGGCCGACAGCCAGCCCGGGCGGCGGTCGGGAATCCTGCCCAATCCGCTG GTGGACGAGCTGAGCAAGTCGTGTGCCGGGCGCGGCGTTTTGATCCCGCTCAAGACGACGCAGGAGGTGCGTCAG GACCATGTCATTGTCCAAGCGTACATGACGAGGGTGCCGACCAAGTCGGCCAACGACGTGATCATGTACGTGTGT GCAAATCTCTGCTTTTTTTCTCCCCAAGCGGCTGACGGAAAGGACGGCACAGGGCAGTTCGCTCGTTGCGACCTG AGGGCAGCGCTAACCCCCTGCCCCATCTCCGGACGTGCGCGAAGCCCAACGATCTTCCAGCTCACTTGAAGACGC AGCTGATGAACGACACGGCAGCCGGGCGACAGATTCATACGTCCAAGTCGAACTGGATCTACGTCATCGTGGGTG AGACCAAGGACTATGACAAGGACGAGGTGTTGCGGGTGCTGTCGGAGCTCGAGGCCGTGGGACAAAACGTGTTCG TGGCCAGCATCCCGATTCCACTGCTGCCACCGACTTCGCAGGTGCAGGCGGCCATGTGGTCGTCGCAATTCTGGC CCACGGTGTATCGCAAGAACAACCCTCTGGGACCGCACCCGAGCGTGGTGGGACGAGGGACGGACGACATCAAGG ACGACGCGTCGGTGTGGATGGCGCTTGCGCACGAGGTGGCACGCGAGGCCAAACGGGCAGGCATCGGCGAGGCCA TGGGGGCCGTCATCGTGCAGCGAAGCGACCGGGGCGCCGAGTTGGTCGGGCTGGCGGGAGACGCGCGACGGCACC AGGCTTCGGTCCGGGGCTTCGGCAACAACCCGATGACGCACTGCGTGGTGCGGGCCATCAGCATGGTGGCGCAGA AGCTGGTGCGGCACGAGTGGAGGGCTGTCGGGATGCCGTTGACGACGCCGAACCTAGCATACGACGCGTTCCAGG ACCGGCCGCTGCTGGAGATGGAGCGGACGTGCCTGGCACAGGAGCACCCCAACAAGGACGGCTACCTCTGCCACG GTCTGGAGCTCTACGTGACGCACGAGCCGTGCGTGGCTTGCTCGATGGGCATCCTCCACTCGCGGATGGGCAAAG TGGCATTTTGCAAGCACATGCCGCGCACCGGCGGGCTCAGCTCCGACGACCGACCGGACGGGGGGGGACGAGGCC TGGGCCTGTTTTGGCGACGAGAGCTCAACTGGAGCTTGCTGGCGTGGGAGTGGGAGCGCGATGGAGTTGCCGGCC TGCCGTCCGTGGACCCGACCACTCATGTTTAG

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