Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|6487
Gene name
LocationContig_71:25117..26131
Strand+
Gene length (bp)1014
Transcript length (bp)1014
Coding sequence length (bp)1014
Protein length (aa) 338

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19086 Terpene_syn_C_2 Terpene synthase family 2, C-terminal metal binding 1.5E-20 86 280

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|B2J4A4|GERAS_NOSP7 Germacrene A synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R3832 PE=1 SV=1 14 322 3.0E-15
sp|A8NE23|COP3_COPC7 Alpha-muurolene synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP3 PE=1 SV=1 25 315 4.0E-13
sp|Q55012|PENA_STREX Pentalenene synthase OS=Streptomyces exfoliatus GN=penA PE=1 SV=4 22 327 2.0E-12
sp|Q82IY4|PTLA_STRAW Pentalenene synthase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=ptlA PE=1 SV=1 22 327 2.0E-11
sp|E3VWJ0|PNTA_STRAE Pentalenene synthase OS=Streptomyces arenae GN=pntA PE=3 SV=1 22 327 5.0E-10
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|B2J4A4|GERAS_NOSP7 Germacrene A synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R3832 PE=1 SV=1 14 322 3.0E-15
sp|A8NE23|COP3_COPC7 Alpha-muurolene synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP3 PE=1 SV=1 25 315 4.0E-13
sp|Q55012|PENA_STREX Pentalenene synthase OS=Streptomyces exfoliatus GN=penA PE=1 SV=4 22 327 2.0E-12
sp|Q82IY4|PTLA_STRAW Pentalenene synthase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=ptlA PE=1 SV=1 22 327 2.0E-11
sp|E3VWJ0|PNTA_STRAE Pentalenene synthase OS=Streptomyces arenae GN=pntA PE=3 SV=1 22 327 5.0E-10
sp|B5GW45|TMUUS_STRC2 (+)-T-muurolol synthase OS=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) GN=SCLAV_p0068 PE=1 SV=1 32 309 2.0E-08
sp|D8S255|MTS30_SELML Microbial Terpene synthase-like protein 30 OS=Selaginella moellendorffii GN=SELMODRAFT_417418 PE=2 SV=1 17 315 4.0E-08
sp|P0DL13|PRO1_ARMGA Delta(6)-protoilludene synthase OS=Armillaria gallica GN=PRO1 PE=1 SV=1 23 315 3.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 39 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|6487
MQIKTQNTISKHQLETLKIPTFTYPWPEECSPHAANVEAQMLSWAEKHNLFPDLDYRKRVERTRYGWLAARCYPR
ASLELLQAAADYFVWFFLADDMFVDRVETFNRETLGNLTAMIDVIDFGTARPRPVYGELAWLDVCRRLRRLLPRE
AFSRFASGMRMWASTAGLQMLLHLCDESSVDLRVYQTIRAHTSGMAPCIALADCASHGFISAQELYDPDVQTLVR
LTGNVVCWSNDIHSVIVEARQPGQFRNSVIICARDVGSLQGGVDKMAEIVRGEIDRFIELSAVVSQRAGPELEGF
IDGMRLWMKGYQNWADRDTLRYDVAFADLDADDRGRI*
Coding >Ophun1|6487
ATGCAGATCAAGACCCAAAACACCATCTCCAAACACCAGCTAGAAACCCTCAAGATCCCAACCTTCACCTACCCC
TGGCCCGAAGAATGCTCCCCCCATGCAGCCAACGTAGAAGCCCAGATGCTCTCATGGGCCGAAAAGCACAATCTC
TTCCCAGACCTCGACTACCGCAAACGCGTTGAGAGAACTCGCTACGGCTGGCTTGCAGCTCGCTGCTACCCACGG
GCCTCTCTTGAGCTACTACAAGCAGCGGCCGACTACTTCGTCTGGTTCTTTCTAGCCGATGATATGTTCGTCGAC
CGCGTCGAGACATTCAACAGGGAGACACTCGGCAATCTTACGGCCATGATCGACGTCATCGACTTTGGAACCGCC
CGTCCAAGGCCCGTCTACGGGGAACTCGCCTGGCTCGATGTCTGTCGCCGTCTTCGCCGGTTGCTGCCCCGTGAG
GCCTTCTCCCGCTTCGCCTCTGGGATGCGTATGTGGGCTTCAACGGCCGGGTTGCAGATGCTGCTTCATCTCTGC
GACGAGTCGTCCGTCGACTTGCGAGTCTACCAGACGATCCGGGCCCATACGTCGGGCATGGCACCTTGTATCGCG
CTGGCCGACTGTGCGAGCCATGGCTTCATTTCTGCGCAGGAACTATACGATCCGGACGTGCAGACGCTCGTCCGG
CTGACCGGCAACGTCGTCTGCTGGAGCAACGATATCCACAGCGTCATAGTCGAGGCCCGTCAGCCAGGACAGTTT
CGAAACTCGGTCATTATCTGCGCCCGGGATGTCGGCTCGCTTCAGGGAGGTGTTGACAAGATGGCTGAGATTGTT
CGGGGTGAGATTGATCGCTTTATCGAGTTGTCGGCTGTGGTGTCGCAGAGGGCTGGACCTGAGCTGGAGGGTTTC
ATCGACGGGATGCGTTTGTGGATGAAGGGGTATCAGAATTGGGCTGATAGGGATACGCTTCGGTATGATGTGGCC
TTTGCTGATCTGGATGCTGATGATCGGGGACGTATATGA
Transcript >Ophun1|6487
ATGCAGATCAAGACCCAAAACACCATCTCCAAACACCAGCTAGAAACCCTCAAGATCCCAACCTTCACCTACCCC
TGGCCCGAAGAATGCTCCCCCCATGCAGCCAACGTAGAAGCCCAGATGCTCTCATGGGCCGAAAAGCACAATCTC
TTCCCAGACCTCGACTACCGCAAACGCGTTGAGAGAACTCGCTACGGCTGGCTTGCAGCTCGCTGCTACCCACGG
GCCTCTCTTGAGCTACTACAAGCAGCGGCCGACTACTTCGTCTGGTTCTTTCTAGCCGATGATATGTTCGTCGAC
CGCGTCGAGACATTCAACAGGGAGACACTCGGCAATCTTACGGCCATGATCGACGTCATCGACTTTGGAACCGCC
CGTCCAAGGCCCGTCTACGGGGAACTCGCCTGGCTCGATGTCTGTCGCCGTCTTCGCCGGTTGCTGCCCCGTGAG
GCCTTCTCCCGCTTCGCCTCTGGGATGCGTATGTGGGCTTCAACGGCCGGGTTGCAGATGCTGCTTCATCTCTGC
GACGAGTCGTCCGTCGACTTGCGAGTCTACCAGACGATCCGGGCCCATACGTCGGGCATGGCACCTTGTATCGCG
CTGGCCGACTGTGCGAGCCATGGCTTCATTTCTGCGCAGGAACTATACGATCCGGACGTGCAGACGCTCGTCCGG
CTGACCGGCAACGTCGTCTGCTGGAGCAACGATATCCACAGCGTCATAGTCGAGGCCCGTCAGCCAGGACAGTTT
CGAAACTCGGTCATTATCTGCGCCCGGGATGTCGGCTCGCTTCAGGGAGGTGTTGACAAGATGGCTGAGATTGTT
CGGGGTGAGATTGATCGCTTTATCGAGTTGTCGGCTGTGGTGTCGCAGAGGGCTGGACCTGAGCTGGAGGGTTTC
ATCGACGGGATGCGTTTGTGGATGAAGGGGTATCAGAATTGGGCTGATAGGGATACGCTTCGGTATGATGTGGCC
TTTGCTGATCTGGATGCTGATGATCGGGGACGTATATGA
Gene >Ophun1|6487
ATGCAGATCAAGACCCAAAACACCATCTCCAAACACCAGCTAGAAACCCTCAAGATCCCAACCTTCACCTACCCC
TGGCCCGAAGAATGCTCCCCCCATGCAGCCAACGTAGAAGCCCAGATGCTCTCATGGGCCGAAAAGCACAATCTC
TTCCCAGACCTCGACTACCGCAAACGCGTTGAGAGAACTCGCTACGGCTGGCTTGCAGCTCGCTGCTACCCACGG
GCCTCTCTTGAGCTACTACAAGCAGCGGCCGACTACTTCGTCTGGTTCTTTCTAGCCGATGATATGTTCGTCGAC
CGCGTCGAGACATTCAACAGGGAGACACTCGGCAATCTTACGGCCATGATCGACGTCATCGACTTTGGAACCGCC
CGTCCAAGGCCCGTCTACGGGGAACTCGCCTGGCTCGATGTCTGTCGCCGTCTTCGCCGGTTGCTGCCCCGTGAG
GCCTTCTCCCGCTTCGCCTCTGGGATGCGTATGTGGGCTTCAACGGCCGGGTTGCAGATGCTGCTTCATCTCTGC
GACGAGTCGTCCGTCGACTTGCGAGTCTACCAGACGATCCGGGCCCATACGTCGGGCATGGCACCTTGTATCGCG
CTGGCCGACTGTGCGAGCCATGGCTTCATTTCTGCGCAGGAACTATACGATCCGGACGTGCAGACGCTCGTCCGG
CTGACCGGCAACGTCGTCTGCTGGAGCAACGATATCCACAGCGTCATAGTCGAGGCCCGTCAGCCAGGACAGTTT
CGAAACTCGGTCATTATCTGCGCCCGGGATGTCGGCTCGCTTCAGGGAGGTGTTGACAAGATGGCTGAGATTGTT
CGGGGTGAGATTGATCGCTTTATCGAGTTGTCGGCTGTGGTGTCGCAGAGGGCTGGACCTGAGCTGGAGGGTTTC
ATCGACGGGATGCGTTTGTGGATGAAGGGGTATCAGAATTGGGCTGATAGGGATACGCTTCGGTATGATGTGGCC
TTTGCTGATCTGGATGCTGATGATCGGGGACGTATATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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