Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|6476
Gene name
LocationContig_709:4086..4860
Strand+
Gene length (bp)774
Transcript length (bp)720
Coding sequence length (bp)720
Protein length (aa) 240

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 28 0.45

Transmembrane Domains

Domain # Start End Length
1 199 221 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|6476
MRPNRRRPPLLSPLLLLLLTTATIAQANVEKIIFPGPPANTPLTDPNPNLDSLSPQRSVLRTNLSRVFPAAEGLA
VRGQSSWLLLYDLVEGRRYELRVCWAAVEPTSFALDVHHLDHVWHIPELNQSLTEFASSKRAVKDTIVLSHQQLP
ERKTSALLLHVRAAADYFTDDHQLMKHPPPVLVDLILDPYLYNIVPQSLVPIAGYLVLVGVVTWFLARWIASSLE
SVAASPQRHANKYD*
Coding >Ophun1|6476
ATGCGCCCCAATCGTCGACGCCCCCCGCTCCTCTCCCCGCTTCTCCTCCTCCTCCTCACCACAGCAACAATCGCC
CAAGCCAACGTCGAAAAGATCATCTTCCCCGGCCCGCCCGCCAACACGCCGCTCACAGACCCCAACCCCAACCTC
GACTCCCTCTCTCCGCAGCGCTCCGTGCTCCGCACCAACCTAAGCCGCGTCTTCCCGGCCGCAGAGGGGCTCGCT
GTCCGTGGTCAGTCGTCGTGGCTGCTTCTGTACGACCTTGTAGAGGGACGGAGATACGAGCTGCGCGTTTGTTGG
GCTGCCGTCGAACCGACGAGCTTCGCACTCGACGTCCACCATCTCGACCATGTCTGGCACATACCCGAACTCAAC
CAATCCCTCACCGAATTTGCGTCCTCGAAACGTGCTGTAAAAGACACCATCGTACTCAGCCATCAGCAGCTCCCA
GAGCGCAAGACGTCGGCCCTGCTCCTCCACGTCCGCGCCGCGGCCGACTACTTCACCGATGACCATCAGCTCATG
AAGCACCCTCCGCCCGTTCTGGTCGACCTCATCCTCGACCCGTATCTATACAACATCGTTCCGCAGTCCCTGGTG
CCCATCGCCGGCTACCTCGTCCTCGTCGGCGTCGTTACTTGGTTTCTTGCTCGATGGATTGCCTCCAGCCTCGAG
TCTGTCGCCGCTTCTCCCCAAAGGCATGCCAACAAGTATGACTAG
Transcript >Ophun1|6476
ATGCGCCCCAATCGTCGACGCCCCCCGCTCCTCTCCCCGCTTCTCCTCCTCCTCCTCACCACAGCAACAATCGCC
CAAGCCAACGTCGAAAAGATCATCTTCCCCGGCCCGCCCGCCAACACGCCGCTCACAGACCCCAACCCCAACCTC
GACTCCCTCTCTCCGCAGCGCTCCGTGCTCCGCACCAACCTAAGCCGCGTCTTCCCGGCCGCAGAGGGGCTCGCT
GTCCGTGGTCAGTCGTCGTGGCTGCTTCTGTACGACCTTGTAGAGGGACGGAGATACGAGCTGCGCGTTTGTTGG
GCTGCCGTCGAACCGACGAGCTTCGCACTCGACGTCCACCATCTCGACCATGTCTGGCACATACCCGAACTCAAC
CAATCCCTCACCGAATTTGCGTCCTCGAAACGTGCTGTAAAAGACACCATCGTACTCAGCCATCAGCAGCTCCCA
GAGCGCAAGACGTCGGCCCTGCTCCTCCACGTCCGCGCCGCGGCCGACTACTTCACCGATGACCATCAGCTCATG
AAGCACCCTCCGCCCGTTCTGGTCGACCTCATCCTCGACCCGTATCTATACAACATCGTTCCGCAGTCCCTGGTG
CCCATCGCCGGCTACCTCGTCCTCGTCGGCGTCGTTACTTGGTTTCTTGCTCGATGGATTGCCTCCAGCCTCGAG
TCTGTCGCCGCTTCTCCCCAAAGGCATGCCAACAAGTATGACTAG
Gene >Ophun1|6476
ATGCGCCCCAATCGTCGACGCCCCCCGCTCCTCTCCCCGCTTCTCCTCCTCCTCCTCACCACAGCAACAATCGCC
CAAGCCAACGTCGAAAAGATCATCTTCCCCGGCCCGCCCGCCAACACGCCGCTCACAGACCCCAACCCCAACCTC
GACTCCCTCTCTCCGCAGCGCTCCGTGCTCCGCACCAACCTAAGCCGCGTCTTCCCGGCCGCAGAGGGGCTCGCT
GTCCGTGGTCAGTCGTCGTGGCTGCTTCTGTACGACCTTGTAGAGGGACGGAGATACGAGCTGCGCGTTTGTTGG
GCTGCCGTCGTGAGTCGTCTCGCGTGTGGGCACGCTCAAGGGGAAGCGATATAACTTGCTTAGGAACCGACGAGC
TTCGCACTCGACGTCCACCATCTCGACCATGTCTGGCACATACCCGAACTCAACCAATCCCTCACCGAATTTGCG
TCCTCGAAACGTGCTGTAAAAGACACCATCGTACTCAGCCATCAGCAGCTCCCAGAGCGCAAGACGTCGGCCCTG
CTCCTCCACGTCCGCGCCGCGGCCGACTACTTCACCGATGACCATCAGCTCATGAAGCACCCTCCGCCCGTTCTG
GTCGACCTCATCCTCGACCCGTATCTATACAACATCGTTCCGCAGTCCCTGGTGCCCATCGCCGGCTACCTCGTC
CTCGTCGGCGTCGTTACTTGGTTTCTTGCTCGATGGATTGCCTCCAGCCTCGAGTCTGTCGCCGCTTCTCCCCAA
AGGCATGCCAACAAGTATGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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