Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|635
Gene name
LocationContig_12:53676..54082
Strand+
Gene length (bp)406
Transcript length (bp)336
Coding sequence length (bp)336
Protein length (aa) 112

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 55 74 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|635
MHAAAAAAAAAAREAALQTARMSRFTPSQLEAMDEADKQRQGEDYRRRYNAAARWWLKIMVGLPVFIVSSWHLFD
RLALGNVPPDVPWPPPPPGMPPYQKEEEKEGKQESS*
Coding >Ophun1|635
ATGCACGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTCGAGAAGCAGCCCTCCAAACCGCCCGGATGAGCCGCTTC
ACCCCATCGCAGCTGGAAGCCATGGACGAGGCGGACAAGCAGCGGCAAGGGGAGGACTATCGGAGACGGTACAAC
GCTGCGGCGAGGTGGTGGCTCAAGATTATGGTTGGGTTGCCGGTTTTTATTGTTTCGAGCTGGCATCTCTTTGAT
CGACTTGCGTTGGGGAATGTGCCTCCGGATGTGCCTTGGCCTCCGCCACCGCCTGGGATGCCGCCTTATCAGAAG
GAAGAGGAAAAGGAAGGGAAACAAGAGTCGTCATAG
Transcript >Ophun1|635
ATGCACGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTCGAGAAGCAGCCCTCCAAACCGCCCGGATGAGCCGCTTC
ACCCCATCGCAGCTGGAAGCCATGGACGAGGCGGACAAGCAGCGGCAAGGGGAGGACTATCGGAGACGGTACAAC
GCTGCGGCGAGGTGGTGGCTCAAGATTATGGTTGGGTTGCCGGTTTTTATTGTTTCGAGCTGGCATCTCTTTGAT
CGACTTGCGTTGGGGAATGTGCCTCCGGATGTGCCTTGGCCTCCGCCACCGCCTGGGATGCCGCCTTATCAGAAG
GAAGAGGAAAAGGAAGGGAAACAAGAGTCGTCATAG
Gene >Ophun1|635
ATGCACGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTCGAGAAGCAGCCCTCCAAACCGCCCGGATGAGCCGCTTC
ACCCCATCGCAGCTGGAAGCCATGGACGAGGCGGACAAGCAGCGGCAAGGGGAGGACTATCGGAGACGGTACAAC
GCTGCGGCGAGGTGGTGGCTCAAGATTATGGTTGGGTTGCCGGTTTTTATTGTTTCGAGCTGGCATCTCTTTGAT
CGACGTGAGTTTACTCTGGCTTTTCTTTCTTGGACTTGGAGATTCGTCTTGTTTGCTCATTCCTGGCGTTGTAGT
TGCGTTGGGGAATGTGCCTCCGGATGTGCCTTGGCCTCCGCCACCGCCTGGGATGCCGCCTTATCAGAAGGAAGA
GGAAAAGGAAGGGAAACAAGAGTCGTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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