Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|6329
Gene name
LocationContig_683:2220..3748
Strand+
Gene length (bp)1528
Transcript length (bp)1467
Coding sequence length (bp)1467
Protein length (aa) 489

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 3.0E-15 411 481

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|6329
MKKLPFKPTALRKSFLSDLASTAAAAADDSNNNDDGLGLFRRSKEMERVAAADRERRLRKKQKQALEEKRQLEHH
LGKRTHQDYDDGRGPEDGSRPFAEEQGAVPRQTSRDSPENGQSRIDDQAGLSKLVTPPASKRSRSDATPSETPIV
SLDEDDESVALNSPSTHLERSRLLPETPVKRRPPSVVPTPTRTAAVISLDSDDDDDSNDSHTETGSAPPITSGDA
PEPSLPGDEDEFGEHIRRAEERRARDKAMVAGRTAGLDAQEVCICITSTVPGAKTSYFKVLYGKALRLVRDAWAN
VQRGHQVQLPETNDDIVLTWRKKKVYNVSNLLSLGIRPGRDGCVGVDDFGLGGTSDNGTKVHMEAWTTDLYKEME
REEEARRRRREAGELSPEPEDDGLGRETGDAAPAKMRVTLKARGFDDVGLSVLPETTVSTLITGFRTQRGVGADR
DVAVWFDGERLADESTMEDAEIDDLDTLEVHVKAAPVA*
Coding >Ophun1|6329
ATGAAGAAGCTCCCCTTCAAGCCGACAGCCTTACGGAAGTCGTTTCTCTCCGACCTCGCGTCTACCGCCGCCGCC
GCTGCTGACGATTCGAACAACAACGACGATGGCCTCGGCTTGTTTCGGAGATCCAAGGAGATGGAGCGTGTTGCT
GCTGCCGACCGTGAGCGACGGCTGAGGAAGAAGCAGAAGCAGGCTTTGGAGGAGAAGAGGCAGCTGGAGCATCAC
CTGGGAAAGCGGACGCATCAGGATTATGATGACGGGCGGGGACCTGAGGATGGCTCGAGACCTTTTGCCGAAGAG
CAAGGCGCTGTTCCTCGGCAGACCTCGCGAGATTCCCCCGAGAACGGCCAGTCGCGGATAGACGACCAAGCCGGG
CTCAGCAAACTCGTCACGCCACCCGCTTCCAAACGCTCTCGATCCGACGCGACGCCATCCGAGACACCCATCGTC
AGCTTGGACGAAGACGACGAGTCGGTCGCCCTCAACTCTCCGTCTACCCACCTTGAGCGTTCCCGGCTGCTGCCC
GAAACGCCCGTTAAGAGGCGGCCTCCCAGCGTGGTGCCCACGCCGACGCGGACCGCCGCCGTCATATCCCTCGAC
TCGGACGACGACGACGACTCGAACGATAGCCACACCGAGACGGGCTCGGCGCCGCCAATCACCAGCGGTGACGCC
CCCGAGCCATCGCTACCCGGCGACGAAGACGAGTTCGGCGAGCATATTCGCAGGGCCGAGGAACGGCGCGCGCGC
GACAAGGCCATGGTGGCTGGCCGGACTGCCGGATTGGATGCACAGGAGGTGTGCATCTGCATCACGTCGACGGTG
CCAGGCGCCAAGACGAGCTACTTTAAAGTCCTCTACGGCAAGGCTCTACGGCTGGTGCGCGATGCCTGGGCCAAT
GTGCAGCGCGGCCATCAAGTGCAGCTGCCCGAGACAAACGACGACATCGTACTCACGTGGCGCAAGAAAAAGGTC
TACAACGTCTCCAACCTGCTCAGCTTGGGCATCCGGCCCGGGAGAGACGGCTGCGTCGGCGTCGACGATTTCGGG
CTCGGCGGCACATCCGATAACGGCACCAAGGTGCACATGGAGGCCTGGACGACGGACCTGTACAAGGAGATGGAG
CGGGAGGAGGAGGCGAGGCGGCGGCGGCGAGAGGCCGGTGAGCTGTCCCCGGAGCCGGAAGACGACGGCTTGGGC
CGTGAGACAGGGGATGCGGCTCCCGCCAAGATGCGGGTGACGCTCAAGGCGCGAGGCTTTGACGATGTCGGCCTC
AGCGTCCTACCGGAGACGACGGTCAGCACGCTCATCACCGGCTTCCGCACCCAGCGTGGCGTCGGTGCCGACCGA
GATGTCGCCGTTTGGTTCGACGGCGAGCGGCTGGCAGATGAGTCGACGATGGAGGATGCCGAGATTGACGATCTG
GACACGCTCGAGGTGCATGTCAAGGCGGCGCCCGTGGCGTGA
Transcript >Ophun1|6329
ATGAAGAAGCTCCCCTTCAAGCCGACAGCCTTACGGAAGTCGTTTCTCTCCGACCTCGCGTCTACCGCCGCCGCC
GCTGCTGACGATTCGAACAACAACGACGATGGCCTCGGCTTGTTTCGGAGATCCAAGGAGATGGAGCGTGTTGCT
GCTGCCGACCGTGAGCGACGGCTGAGGAAGAAGCAGAAGCAGGCTTTGGAGGAGAAGAGGCAGCTGGAGCATCAC
CTGGGAAAGCGGACGCATCAGGATTATGATGACGGGCGGGGACCTGAGGATGGCTCGAGACCTTTTGCCGAAGAG
CAAGGCGCTGTTCCTCGGCAGACCTCGCGAGATTCCCCCGAGAACGGCCAGTCGCGGATAGACGACCAAGCCGGG
CTCAGCAAACTCGTCACGCCACCCGCTTCCAAACGCTCTCGATCCGACGCGACGCCATCCGAGACACCCATCGTC
AGCTTGGACGAAGACGACGAGTCGGTCGCCCTCAACTCTCCGTCTACCCACCTTGAGCGTTCCCGGCTGCTGCCC
GAAACGCCCGTTAAGAGGCGGCCTCCCAGCGTGGTGCCCACGCCGACGCGGACCGCCGCCGTCATATCCCTCGAC
TCGGACGACGACGACGACTCGAACGATAGCCACACCGAGACGGGCTCGGCGCCGCCAATCACCAGCGGTGACGCC
CCCGAGCCATCGCTACCCGGCGACGAAGACGAGTTCGGCGAGCATATTCGCAGGGCCGAGGAACGGCGCGCGCGC
GACAAGGCCATGGTGGCTGGCCGGACTGCCGGATTGGATGCACAGGAGGTGTGCATCTGCATCACGTCGACGGTG
CCAGGCGCCAAGACGAGCTACTTTAAAGTCCTCTACGGCAAGGCTCTACGGCTGGTGCGCGATGCCTGGGCCAAT
GTGCAGCGCGGCCATCAAGTGCAGCTGCCCGAGACAAACGACGACATCGTACTCACGTGGCGCAAGAAAAAGGTC
TACAACGTCTCCAACCTGCTCAGCTTGGGCATCCGGCCCGGGAGAGACGGCTGCGTCGGCGTCGACGATTTCGGG
CTCGGCGGCACATCCGATAACGGCACCAAGGTGCACATGGAGGCCTGGACGACGGACCTGTACAAGGAGATGGAG
CGGGAGGAGGAGGCGAGGCGGCGGCGGCGAGAGGCCGGTGAGCTGTCCCCGGAGCCGGAAGACGACGGCTTGGGC
CGTGAGACAGGGGATGCGGCTCCCGCCAAGATGCGGGTGACGCTCAAGGCGCGAGGCTTTGACGATGTCGGCCTC
AGCGTCCTACCGGAGACGACGGTCAGCACGCTCATCACCGGCTTCCGCACCCAGCGTGGCGTCGGTGCCGACCGA
GATGTCGCCGTTTGGTTCGACGGCGAGCGGCTGGCAGATGAGTCGACGATGGAGGATGCCGAGATTGACGATCTG
GACACGCTCGAGGTGCATGTCAAGGCGGCGCCCGTGGCGTGA
Gene >Ophun1|6329
ATGAAGAAGCTCCCCTTCAAGCCGACAGCCTTACGGAAGTCGTTTCTCTCCGACCTCGCGTCTACCGCCGCCGCC
GCTGCTGACGATTCGAACAACAACGACGATGGCCTCGGCTTGTTTCGGAGATCCAAGGAGATGGAGCGTGTTGCT
GCTGCCGACCGTGAGCGACGGCTGAGGAAGAAGCAGAAGCAGGCTTTGGAGGAGAAGAGGCAGCTGGAGCATCAC
CTGGGAAAGCGGACGCATCAGGATTATGATGACGGGCGGGGACCTGAGGATGGCTCGAGACCTTTTGCCGAAGAG
CAAGGCGCTGTTCCTCGGCAGACCTCGCGAGATTCCCCCGAGAACGGCCAGTCGCGGATAGACGACCAAGCCGGG
CTCAGGTACATGTGTTCCATGTAAATCTCTGGACAGCGGAGCGCCCAACTGACTCTTGAGATCCAGCAAACTCGT
CACGCCACCCGCTTCCAAACGCTCTCGATCCGACGCGACGCCATCCGAGACACCCATCGTCAGCTTGGACGAAGA
CGACGAGTCGGTCGCCCTCAACTCTCCGTCTACCCACCTTGAGCGTTCCCGGCTGCTGCCCGAAACGCCCGTTAA
GAGGCGGCCTCCCAGCGTGGTGCCCACGCCGACGCGGACCGCCGCCGTCATATCCCTCGACTCGGACGACGACGA
CGACTCGAACGATAGCCACACCGAGACGGGCTCGGCGCCGCCAATCACCAGCGGTGACGCCCCCGAGCCATCGCT
ACCCGGCGACGAAGACGAGTTCGGCGAGCATATTCGCAGGGCCGAGGAACGGCGCGCGCGCGACAAGGCCATGGT
GGCTGGCCGGACTGCCGGATTGGATGCACAGGAGGTGTGCATCTGCATCACGTCGACGGTGCCAGGCGCCAAGAC
GAGCTACTTTAAAGTCCTCTACGGCAAGGCTCTACGGCTGGTGCGCGATGCCTGGGCCAATGTGCAGCGCGGCCA
TCAAGTGCAGCTGCCCGAGACAAACGACGACATCGTACTCACGTGGCGCAAGAAAAAGGTCTACAACGTCTCCAA
CCTGCTCAGCTTGGGCATCCGGCCCGGGAGAGACGGCTGCGTCGGCGTCGACGATTTCGGGCTCGGCGGCACATC
CGATAACGGCACCAAGGTGCACATGGAGGCCTGGACGACGGACCTGTACAAGGAGATGGAGCGGGAGGAGGAGGC
GAGGCGGCGGCGGCGAGAGGCCGGTGAGCTGTCCCCGGAGCCGGAAGACGACGGCTTGGGCCGTGAGACAGGGGA
TGCGGCTCCCGCCAAGATGCGGGTGACGCTCAAGGCGCGAGGCTTTGACGATGTCGGCCTCAGCGTCCTACCGGA
GACGACGGTCAGCACGCTCATCACCGGCTTCCGCACCCAGCGTGGCGTCGGTGCCGACCGAGATGTCGCCGTTTG
GTTCGACGGCGAGCGGCTGGCAGATGAGTCGACGATGGAGGATGCCGAGATTGACGATCTGGACACGCTCGAGGT
GCATGTCAAGGCGGCGCCCGTGGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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