Protein ID | Ophun1|6318 |
Gene name | |
Location | Contig_681:2780..4142 |
Strand | - |
Gene length (bp) | 1362 |
Transcript length (bp) | 1362 |
Coding sequence length (bp) | 1362 |
Protein length (aa) | 454 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02213 | GYF | GYF domain | 1.3E-06 | 397 | 440 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O94693|LIN1_SCHPO | LIN1-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC83.09c PE=3 SV=1 | 144 | 428 | 6.0E-22 |
sp|Q9VKV5|CD2B2_DROME | CD2 antigen cytoplasmic tail-binding protein 2 homolog OS=Drosophila melanogaster GN=holn1 PE=1 SV=1 | 204 | 443 | 3.0E-08 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|6318 MASRYSAARPKRAGENFARTHHHDRNDEGDKKRVKFDVRNPSTLAPDAREDDHVLDADVIGGTSATKRGAVNLDG YDSDSDNEEFETKAAARRSGQIDLLKQMDNYDAGGDAVENRDDDDDDDMFAADTENTGHDGSKKPQKKQVSFMEY SQIEGQEDTSKSGGRVRLDEQESSDDEADVELAIQEEGVDEEVGAGGLKRNAPKIEAFNMREEMEQGRFDQNENY VRNADDPDALHDGWLEGCSKKDMKKAAEAHEKREAEARTKRIQDDGVLVADLLRALISQLERTESALEALARLGK SQTKSKKLPKWKQKKANKGAECMDVDAEAGEHDAKHAKIKASIDAITEAADKLLSRDFEDIYDQERELLVREYER RAGEPWVEPEQVADGDEEAEMWEFRWMDGRDGGGAQGPFDGATMKAWDEAGYFGQGGVEFRLAGDDSGRGWMQEA AFG* |
Coding | >Ophun1|6318 ATGGCCTCACGATACTCGGCGGCGCGGCCCAAGCGGGCTGGCGAGAACTTTGCGCGGACCCATCACCATGACCGC AACGACGAGGGAGACAAGAAGAGAGTCAAGTTTGACGTGCGGAATCCATCGACGCTTGCACCGGATGCTCGCGAG GACGATCATGTGCTCGATGCCGATGTCATTGGTGGCACCAGCGCTACGAAGCGAGGCGCCGTTAATCTCGACGGT TATGACAGCGATTCGGACAATGAGGAGTTCGAGACCAAAGCTGCAGCCCGTAGGAGCGGCCAAATCGATCTGCTG AAACAAATGGACAACTACGATGCTGGCGGCGATGCTGTGGAGAATAGAGATGATGACGACGACGATGACATGTTC GCCGCAGACACGGAGAATACAGGCCACGACGGCTCTAAGAAACCTCAAAAGAAGCAGGTTAGCTTTATGGAGTAC TCGCAGATCGAAGGCCAAGAGGATACGAGCAAAAGTGGCGGCCGGGTCCGACTAGACGAGCAGGAGAGCAGCGAC GACGAGGCCGACGTCGAGCTGGCGATACAGGAGGAGGGGGTCGACGAGGAAGTAGGTGCTGGAGGTCTAAAGCGC AACGCGCCCAAGATTGAAGCATTCAACATGAGGGAAGAGATGGAGCAAGGTCGTTTCGATCAAAACGAAAACTAT GTTCGCAATGCCGACGACCCGGATGCTTTGCACGACGGTTGGCTCGAGGGGTGCAGCAAGAAAGATATGAAGAAG GCGGCCGAGGCGCACGAGAAGCGTGAGGCCGAGGCTCGCACCAAGCGCATACAAGACGACGGCGTCTTGGTGGCA GACCTGCTCCGGGCGCTCATCTCGCAGCTAGAGAGGACAGAGTCTGCGCTCGAGGCTCTGGCCCGGCTAGGCAAG AGCCAGACCAAGAGCAAAAAGCTGCCCAAGTGGAAGCAGAAGAAGGCGAACAAGGGCGCAGAATGCATGGACGTT GACGCCGAGGCCGGCGAGCACGACGCCAAGCATGCCAAGATCAAGGCGTCCATCGACGCCATCACCGAGGCGGCC GACAAGCTCCTCAGCCGGGACTTTGAGGATATTTACGATCAGGAGAGGGAGTTGCTCGTGCGAGAGTACGAGCGG AGAGCTGGTGAACCGTGGGTCGAGCCCGAGCAGGTGGCCGACGGTGACGAAGAAGCGGAAATGTGGGAATTTCGC TGGATGGACGGGCGCGATGGCGGCGGCGCGCAGGGTCCCTTTGACGGCGCGACGATGAAGGCCTGGGATGAGGCG GGCTACTTTGGCCAGGGGGGTGTCGAGTTCCGTCTGGCCGGGGACGACAGCGGCCGGGGCTGGATGCAGGAGGCG GCCTTCGGGTGA |
Transcript | >Ophun1|6318 ATGGCCTCACGATACTCGGCGGCGCGGCCCAAGCGGGCTGGCGAGAACTTTGCGCGGACCCATCACCATGACCGC AACGACGAGGGAGACAAGAAGAGAGTCAAGTTTGACGTGCGGAATCCATCGACGCTTGCACCGGATGCTCGCGAG GACGATCATGTGCTCGATGCCGATGTCATTGGTGGCACCAGCGCTACGAAGCGAGGCGCCGTTAATCTCGACGGT TATGACAGCGATTCGGACAATGAGGAGTTCGAGACCAAAGCTGCAGCCCGTAGGAGCGGCCAAATCGATCTGCTG AAACAAATGGACAACTACGATGCTGGCGGCGATGCTGTGGAGAATAGAGATGATGACGACGACGATGACATGTTC GCCGCAGACACGGAGAATACAGGCCACGACGGCTCTAAGAAACCTCAAAAGAAGCAGGTTAGCTTTATGGAGTAC TCGCAGATCGAAGGCCAAGAGGATACGAGCAAAAGTGGCGGCCGGGTCCGACTAGACGAGCAGGAGAGCAGCGAC GACGAGGCCGACGTCGAGCTGGCGATACAGGAGGAGGGGGTCGACGAGGAAGTAGGTGCTGGAGGTCTAAAGCGC AACGCGCCCAAGATTGAAGCATTCAACATGAGGGAAGAGATGGAGCAAGGTCGTTTCGATCAAAACGAAAACTAT GTTCGCAATGCCGACGACCCGGATGCTTTGCACGACGGTTGGCTCGAGGGGTGCAGCAAGAAAGATATGAAGAAG GCGGCCGAGGCGCACGAGAAGCGTGAGGCCGAGGCTCGCACCAAGCGCATACAAGACGACGGCGTCTTGGTGGCA GACCTGCTCCGGGCGCTCATCTCGCAGCTAGAGAGGACAGAGTCTGCGCTCGAGGCTCTGGCCCGGCTAGGCAAG AGCCAGACCAAGAGCAAAAAGCTGCCCAAGTGGAAGCAGAAGAAGGCGAACAAGGGCGCAGAATGCATGGACGTT GACGCCGAGGCCGGCGAGCACGACGCCAAGCATGCCAAGATCAAGGCGTCCATCGACGCCATCACCGAGGCGGCC GACAAGCTCCTCAGCCGGGACTTTGAGGATATTTACGATCAGGAGAGGGAGTTGCTCGTGCGAGAGTACGAGCGG AGAGCTGGTGAACCGTGGGTCGAGCCCGAGCAGGTGGCCGACGGTGACGAAGAAGCGGAAATGTGGGAATTTCGC TGGATGGACGGGCGCGATGGCGGCGGCGCGCAGGGTCCCTTTGACGGCGCGACGATGAAGGCCTGGGATGAGGCG GGCTACTTTGGCCAGGGGGGTGTCGAGTTCCGTCTGGCCGGGGACGACAGCGGCCGGGGCTGGATGCAGGAGGCG GCCTTCGGGTGA |
Gene | >Ophun1|6318 ATGGCCTCACGATACTCGGCGGCGCGGCCCAAGCGGGCTGGCGAGAACTTTGCGCGGACCCATCACCATGACCGC AACGACGAGGGAGACAAGAAGAGAGTCAAGTTTGACGTGCGGAATCCATCGACGCTTGCACCGGATGCTCGCGAG GACGATCATGTGCTCGATGCCGATGTCATTGGTGGCACCAGCGCTACGAAGCGAGGCGCCGTTAATCTCGACGGT TATGACAGCGATTCGGACAATGAGGAGTTCGAGACCAAAGCTGCAGCCCGTAGGAGCGGCCAAATCGATCTGCTG AAACAAATGGACAACTACGATGCTGGCGGCGATGCTGTGGAGAATAGAGATGATGACGACGACGATGACATGTTC GCCGCAGACACGGAGAATACAGGCCACGACGGCTCTAAGAAACCTCAAAAGAAGCAGGTTAGCTTTATGGAGTAC TCGCAGATCGAAGGCCAAGAGGATACGAGCAAAAGTGGCGGCCGGGTCCGACTAGACGAGCAGGAGAGCAGCGAC GACGAGGCCGACGTCGAGCTGGCGATACAGGAGGAGGGGGTCGACGAGGAAGTAGGTGCTGGAGGTCTAAAGCGC AACGCGCCCAAGATTGAAGCATTCAACATGAGGGAAGAGATGGAGCAAGGTCGTTTCGATCAAAACGAAAACTAT GTTCGCAATGCCGACGACCCGGATGCTTTGCACGACGGTTGGCTCGAGGGGTGCAGCAAGAAAGATATGAAGAAG GCGGCCGAGGCGCACGAGAAGCGTGAGGCCGAGGCTCGCACCAAGCGCATACAAGACGACGGCGTCTTGGTGGCA GACCTGCTCCGGGCGCTCATCTCGCAGCTAGAGAGGACAGAGTCTGCGCTCGAGGCTCTGGCCCGGCTAGGCAAG AGCCAGACCAAGAGCAAAAAGCTGCCCAAGTGGAAGCAGAAGAAGGCGAACAAGGGCGCAGAATGCATGGACGTT GACGCCGAGGCCGGCGAGCACGACGCCAAGCATGCCAAGATCAAGGCGTCCATCGACGCCATCACCGAGGCGGCC GACAAGCTCCTCAGCCGGGACTTTGAGGATATTTACGATCAGGAGAGGGAGTTGCTCGTGCGAGAGTACGAGCGG AGAGCTGGTGAACCGTGGGTCGAGCCCGAGCAGGTGGCCGACGGTGACGAAGAAGCGGAAATGTGGGAATTTCGC TGGATGGACGGGCGCGATGGCGGCGGCGCGCAGGGTCCCTTTGACGGCGCGACGATGAAGGCCTGGGATGAGGCG GGCTACTTTGGCCAGGGGGGTGTCGAGTTCCGTCTGGCCGGGGACGACAGCGGCCGGGGCTGGATGCAGGAGGCG GCCTTCGGGTGA |