© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|6280 |
| Gene name | |
| Location | Contig_677:214..1065 |
| Strand | + |
| Gene length (bp) | 851 |
| Transcript length (bp) | 786 |
| Coding sequence length (bp) | 786 |
| Protein length (aa) | 262 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 17 | 36 | 19 |
| 2 | 98 | 120 | 22 |
| 3 | 127 | 149 | 22 |
| 4 | 154 | 176 | 22 |
| 5 | 199 | 221 | 22 |
| 6 | 225 | 247 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|6280 MFIASAMSYGALQRHGLVGRHPLAAVVVGLGLYLLFDRALDRVERPVPAGSIKAASRWGSVQRYSADLSIVETSW PRASFLAACVGGFGLSLTTAVPSPWSALVPILHILFESVFLSAMGAKRTARYLVLCSPVFFATICVHWGVSALVT APRLVIRPWAFVSLVLVGRGLLDLLLKTSLRHRAELRWARSEALVSTRVLVMLCIGLVTLHHVGTGLVTYIKPTM VLAIYGLNGAGFLAVASYNVAFNLKGGLARSEEDSR* |
| Coding | >Ophun1|6280 ATGTTCATCGCCTCGGCGATGTCGTACGGCGCGTTGCAGCGACACGGCCTCGTCGGTCGCCATCCCCTGGCGGCC GTCGTCGTTGGACTCGGCCTATATCTGCTCTTCGACCGCGCTCTCGACCGGGTCGAGCGCCCCGTTCCGGCCGGT AGCATCAAGGCGGCCTCGAGATGGGGCTCGGTGCAGCGGTACAGCGCCGATCTGAGCATCGTCGAGACGTCTTGG CCCCGGGCCTCGTTCCTGGCTGCCTGCGTCGGGGGATTCGGTCTGTCACTGACCACGGCGGTGCCTTCACCGTGG TCGGCGCTGGTGCCCATCCTGCACATTCTGTTTGAGTCCGTCTTCCTCTCCGCCATGGGTGCCAAGAGGACGGCC CGCTATCTCGTCCTCTGCTCGCCCGTCTTCTTCGCCACCATATGCGTCCACTGGGGTGTATCAGCCCTGGTAACG GCCCCTCGCCTCGTCATCCGCCCCTGGGCCTTCGTCTCCCTCGTCCTGGTTGGCCGCGGCTTGCTCGACCTGCTC CTCAAGACCAGCCTGCGGCACCGGGCCGAGCTCCGCTGGGCTCGAAGCGAGGCCCTCGTCTCCACTCGGGTCCTC GTCATGCTCTGCATCGGCCTCGTCACGCTTCACCACGTCGGCACGGGCCTCGTGACCTACATCAAGCCGACCATG GTGCTGGCCATCTATGGCCTCAACGGTGCGGGATTCCTCGCCGTGGCATCGTACAACGTCGCCTTCAACCTCAAA GGCGGCTTAGCTCGGTCGGAAGAGGATTCCCGTTGA |
| Transcript | >Ophun1|6280 ATGTTCATCGCCTCGGCGATGTCGTACGGCGCGTTGCAGCGACACGGCCTCGTCGGTCGCCATCCCCTGGCGGCC GTCGTCGTTGGACTCGGCCTATATCTGCTCTTCGACCGCGCTCTCGACCGGGTCGAGCGCCCCGTTCCGGCCGGT AGCATCAAGGCGGCCTCGAGATGGGGCTCGGTGCAGCGGTACAGCGCCGATCTGAGCATCGTCGAGACGTCTTGG CCCCGGGCCTCGTTCCTGGCTGCCTGCGTCGGGGGATTCGGTCTGTCACTGACCACGGCGGTGCCTTCACCGTGG TCGGCGCTGGTGCCCATCCTGCACATTCTGTTTGAGTCCGTCTTCCTCTCCGCCATGGGTGCCAAGAGGACGGCC CGCTATCTCGTCCTCTGCTCGCCCGTCTTCTTCGCCACCATATGCGTCCACTGGGGTGTATCAGCCCTGGTAACG GCCCCTCGCCTCGTCATCCGCCCCTGGGCCTTCGTCTCCCTCGTCCTGGTTGGCCGCGGCTTGCTCGACCTGCTC CTCAAGACCAGCCTGCGGCACCGGGCCGAGCTCCGCTGGGCTCGAAGCGAGGCCCTCGTCTCCACTCGGGTCCTC GTCATGCTCTGCATCGGCCTCGTCACGCTTCACCACGTCGGCACGGGCCTCGTGACCTACATCAAGCCGACCATG GTGCTGGCCATCTATGGCCTCAACGGTGCGGGATTCCTCGCCGTGGCATCGTACAACGTCGCCTTCAACCTCAAA GGCGGCTTAGCTCGGTCGGAAGAGGATTCCCGTTGA |
| Gene | >Ophun1|6280 ATGTTCATCGCCTCGGCGATGTCGTACGGCGCGTTGCAGCGACACGGCCTCGTCGGTCGCCATCCCCTGGCGGCC GTCGTCGTTGGACTCGGCCTATATCTGCTCTTCGACCGCGCTCTCGACCGGGTCGAGCGCCCCGTTCCGGCCGGT AGCATCAAGGCGGCCTCGAGATGGGGCTCGGTGCAGCGGTACAGCGCCGATCTGAGCATCGTCGAGACGTCTTGG CCCCGGGCCTCGTTCCTGGCTGCCTGCGTCGGGGGATTCGGTCTGTCACTGACCACGGCGGTGCCTTCACCGTGG TCGGCGCTGGTGCCCATCCTGCACATTCTGTTTGAGGTGAGCTTCTTGTCCTTGACTCCCTCTCTCTCCCTTCTG ATAACTCACCTCTTCACTCTACACAGTCCGTCTTCCTCTCCGCCATGGGTGCCAAGAGGACGGCCCGCTATCTCG TCCTCTGCTCGCCCGTCTTCTTCGCCACCATATGCGTCCACTGGGGTGTATCAGCCCTGGTAACGGCCCCTCGCC TCGTCATCCGCCCCTGGGCCTTCGTCTCCCTCGTCCTGGTTGGCCGCGGCTTGCTCGACCTGCTCCTCAAGACCA GCCTGCGGCACCGGGCCGAGCTCCGCTGGGCTCGAAGCGAGGCCCTCGTCTCCACTCGGGTCCTCGTCATGCTCT GCATCGGCCTCGTCACGCTTCACCACGTCGGCACGGGCCTCGTGACCTACATCAAGCCGACCATGGTGCTGGCCA TCTATGGCCTCAACGGTGCGGGATTCCTCGCCGTGGCATCGTACAACGTCGCCTTCAACCTCAAAGGCGGCTTAG CTCGGTCGGAAGAGGATTCCCGTTGA |