Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|6266
Gene name
Location	Contig_673:368..1187
Strand	+
Gene length (bp)	819
Transcript length (bp)	819
Coding sequence length (bp)	819
Protein length (aa)	273

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00856	SET	SET domain	2.9E-08	24	122

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O74405\|SET11_SCHPO	Ribosomal lysine N-methyltransferase set11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set11 PE=1 SV=1	9	241	3.0E-20
sp\|P58467\|SETD4_MOUSE	SET domain-containing protein 4 OS=Mus musculus GN=Setd4 PE=2 SV=1	2	239	1.0E-15
sp\|Q9NVD3\|SETD4_HUMAN	SET domain-containing protein 4 OS=Homo sapiens GN=SETD4 PE=2 SV=1	2	256	5.0E-13

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|6266 MPLCWPEELRRLLPPASKTILDRQRKKLDDDWAIVSSGDLGIKREDFVYAWMLVNSRTFYHTTPRTEHRLPKEDH MALIPVADLFNHSSSASTVKASYDATSYTFTTTRAHTPGQELLLCYGQHSNDTLLVDYGFTLPANPHDETTLDAF ITPLLTRQQSRHLRRAGFTGPYVLDAETPCYRTVTALRLMALPAAAWGSVLDGSRDEDEDAAVVDEGLGALLADF EMEIRRQLELVSQLDDDDATSDQKACLRARWIAIQDMVLANLTRLRR*
Coding	>Ophun1\|6266 ATGCCTTTATGCTGGCCTGAGGAGTTGCGCCGGCTTCTCCCCCCTGCTTCCAAGACGATTCTCGATCGACAGAGG AAGAAGCTGGATGATGACTGGGCCATCGTGTCGAGCGGTGACCTCGGTATCAAACGGGAAGATTTCGTCTACGCC TGGATGCTCGTCAACAGCCGGACCTTTTACCACACAACCCCGAGGACAGAACATCGACTCCCAAAGGAAGATCAC ATGGCCCTCATCCCAGTAGCAGACCTCTTCAACCACAGCTCCTCAGCCAGCACCGTCAAAGCCTCCTACGACGCC ACCTCCTACACCTTCACCACCACCCGCGCCCACACCCCCGGCCAAGAACTCCTCCTCTGCTACGGCCAGCATTCC AACGACACGCTCCTGGTAGACTACGGCTTCACCCTCCCCGCCAACCCGCACGACGAAACGACGCTCGACGCCTTC ATCACCCCGCTGCTCACCCGGCAGCAGAGCCGACATCTTCGCCGCGCGGGCTTCACCGGTCCGTACGTGCTGGAC GCGGAGACGCCGTGTTACCGCACCGTCACGGCCCTGCGCTTGATGGCTCTTCCGGCTGCGGCGTGGGGGTCCGTG CTGGATGGCTCGCGGGATGAGGACGAGGATGCTGCTGTTGTGGATGAGGGGCTGGGGGCTTTGCTGGCGGACTTT GAGATGGAGATTCGGCGGCAGCTTGAGCTTGTGTCTCAACTCGACGATGATGATGCCACGTCTGATCAAAAGGCA TGCTTGCGTGCAAGATGGATCGCCATCCAGGACATGGTTCTCGCAAACTTGACTCGTCTCCGAAGATAG
Transcript	>Ophun1\|6266 ATGCCTTTATGCTGGCCTGAGGAGTTGCGCCGGCTTCTCCCCCCTGCTTCCAAGACGATTCTCGATCGACAGAGG AAGAAGCTGGATGATGACTGGGCCATCGTGTCGAGCGGTGACCTCGGTATCAAACGGGAAGATTTCGTCTACGCC TGGATGCTCGTCAACAGCCGGACCTTTTACCACACAACCCCGAGGACAGAACATCGACTCCCAAAGGAAGATCAC ATGGCCCTCATCCCAGTAGCAGACCTCTTCAACCACAGCTCCTCAGCCAGCACCGTCAAAGCCTCCTACGACGCC ACCTCCTACACCTTCACCACCACCCGCGCCCACACCCCCGGCCAAGAACTCCTCCTCTGCTACGGCCAGCATTCC AACGACACGCTCCTGGTAGACTACGGCTTCACCCTCCCCGCCAACCCGCACGACGAAACGACGCTCGACGCCTTC ATCACCCCGCTGCTCACCCGGCAGCAGAGCCGACATCTTCGCCGCGCGGGCTTCACCGGTCCGTACGTGCTGGAC GCGGAGACGCCGTGTTACCGCACCGTCACGGCCCTGCGCTTGATGGCTCTTCCGGCTGCGGCGTGGGGGTCCGTG CTGGATGGCTCGCGGGATGAGGACGAGGATGCTGCTGTTGTGGATGAGGGGCTGGGGGCTTTGCTGGCGGACTTT GAGATGGAGATTCGGCGGCAGCTTGAGCTTGTGTCTCAACTCGACGATGATGATGCCACGTCTGATCAAAAGGCA TGCTTGCGTGCAAGATGGATCGCCATCCAGGACATGGTTCTCGCAAACTTGACTCGTCTCCGAAGATAG
Gene	>Ophun1\|6266 ATGCCTTTATGCTGGCCTGAGGAGTTGCGCCGGCTTCTCCCCCCTGCTTCCAAGACGATTCTCGATCGACAGAGG AAGAAGCTGGATGATGACTGGGCCATCGTGTCGAGCGGTGACCTCGGTATCAAACGGGAAGATTTCGTCTACGCC TGGATGCTCGTCAACAGCCGGACCTTTTACCACACAACCCCGAGGACAGAACATCGACTCCCAAAGGAAGATCAC ATGGCCCTCATCCCAGTAGCAGACCTCTTCAACCACAGCTCCTCAGCCAGCACCGTCAAAGCCTCCTACGACGCC ACCTCCTACACCTTCACCACCACCCGCGCCCACACCCCCGGCCAAGAACTCCTCCTCTGCTACGGCCAGCATTCC AACGACACGCTCCTGGTAGACTACGGCTTCACCCTCCCCGCCAACCCGCACGACGAAACGACGCTCGACGCCTTC ATCACCCCGCTGCTCACCCGGCAGCAGAGCCGACATCTTCGCCGCGCGGGCTTCACCGGTCCGTACGTGCTGGAC GCGGAGACGCCGTGTTACCGCACCGTCACGGCCCTGCGCTTGATGGCTCTTCCGGCTGCGGCGTGGGGGTCCGTG CTGGATGGCTCGCGGGATGAGGACGAGGATGCTGCTGTTGTGGATGAGGGGCTGGGGGCTTTGCTGGCGGACTTT GAGATGGAGATTCGGCGGCAGCTTGAGCTTGTGTCTCAACTCGACGATGATGATGCCACGTCTGATCAAAAGGCA TGCTTGCGTGCAAGATGGATCGCCATCCAGGACATGGTTCTCGCAAACTTGACTCGTCTCCGAAGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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