Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|6239
Gene name
LocationContig_67:7401..10015
Strand-
Gene length (bp)2614
Transcript length (bp)1848
Coding sequence length (bp)1848
Protein length (aa) 616

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 6.6E-25 232 508
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.5E-11 232 443
PF07993 NAD_binding_4 Male sterility protein 4.0E-07 308 429

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9D665|D42E1_MOUSE Short-chain dehydrogenase/reductase family 42E member 1 OS=Mus musculus GN=Sdr42e1 PE=1 SV=1 224 614 2.0E-15
sp|A8DZE7|D42E1_DANRE Short-chain dehydrogenase/reductase family 42E member 1 OS=Danio rerio GN=sdr42e1 PE=2 SV=1 227 614 3.0E-15
sp|Q4R7R1|D42E1_MACFA Short-chain dehydrogenase/reductase family 42E member 1 OS=Macaca fascicularis GN=SDR42E1 PE=2 SV=1 226 542 3.0E-13
sp|Q8WUS8|D42E1_HUMAN Short-chain dehydrogenase/reductase family 42E member 1 OS=Homo sapiens GN=SDR42E1 PE=2 SV=2 226 542 2.0E-12
sp|Q32L94|D42E1_BOVIN Short-chain dehydrogenase/reductase family 42E member 1 OS=Bos taurus GN=SDR42E1 PE=2 SV=2 232 509 9.0E-12
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Swissprot ID Swissprot Description Start End E-value
sp|Q9D665|D42E1_MOUSE Short-chain dehydrogenase/reductase family 42E member 1 OS=Mus musculus GN=Sdr42e1 PE=1 SV=1 224 614 2.0E-15
sp|A8DZE7|D42E1_DANRE Short-chain dehydrogenase/reductase family 42E member 1 OS=Danio rerio GN=sdr42e1 PE=2 SV=1 227 614 3.0E-15
sp|Q4R7R1|D42E1_MACFA Short-chain dehydrogenase/reductase family 42E member 1 OS=Macaca fascicularis GN=SDR42E1 PE=2 SV=1 226 542 3.0E-13
sp|Q8WUS8|D42E1_HUMAN Short-chain dehydrogenase/reductase family 42E member 1 OS=Homo sapiens GN=SDR42E1 PE=2 SV=2 226 542 2.0E-12
sp|Q32L94|D42E1_BOVIN Short-chain dehydrogenase/reductase family 42E member 1 OS=Bos taurus GN=SDR42E1 PE=2 SV=2 232 509 9.0E-12
sp|Q9EQC1|3BHS7_MOUSE 3 beta-hydroxysteroid dehydrogenase type 7 OS=Mus musculus GN=Hsd3b7 PE=1 SV=1 231 612 8.0E-11
sp|Q9R1J0|NSDHL_MOUSE Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Mus musculus GN=Nsdhl PE=1 SV=1 226 497 3.0E-10
sp|Q3ZBE9|NSDHL_BOVIN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Bos taurus GN=NSDHL PE=2 SV=1 227 497 7.0E-10
sp|Q15738|NSDHL_HUMAN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Homo sapiens GN=NSDHL PE=1 SV=2 229 497 2.0E-09
sp|P26439|3BHS2_HUMAN 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 OS=Homo sapiens GN=HSD3B2 PE=1 SV=2 232 541 6.0E-09
sp|Q0IH73|D42E1_XENLA Short-chain dehydrogenase/reductase family 42E member 1 OS=Xenopus laevis GN=sdr42e1 PE=2 SV=1 232 499 7.0E-09
sp|P9WQP7|3BHS_MYCTU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1106c PE=1 SV=1 230 509 1.0E-08
sp|Q5PPL3|NSDHL_RAT Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Rattus norvegicus GN=Nsdhl PE=2 SV=1 226 497 1.0E-08
sp|P9WQP6|3BHS_MYCTO 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1137 PE=3 SV=1 230 509 1.0E-08
sp|O43050|ERG26_SCHPO Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg26 PE=3 SV=1 232 549 5.0E-08
sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2 228 612 9.0E-08
sp|O57245|3BHS_VACCA 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Vaccinia virus (strain Ankara) GN=MVA157L PE=3 SV=1 231 433 1.0E-07
sp|P26670|3BHS_VACCW 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Vaccinia virus (strain Western Reserve) GN=VACWR170 PE=3 SV=1 231 433 1.0E-07
sp|P21097|3BHS_VACCC 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Vaccinia virus (strain Copenhagen) GN=A44L PE=3 SV=1 231 433 1.0E-07
sp|A6NKP2|D42E2_HUMAN Putative short-chain dehydrogenase/reductase family 42E member 2 OS=Homo sapiens GN=SDR42E2 PE=3 SV=3 226 530 1.0E-07
sp|O35048|3BHS7_RAT 3 beta-hydroxysteroid dehydrogenase type 7 OS=Rattus norvegicus GN=Hsd3b7 PE=2 SV=1 231 612 2.0E-07
sp|Q9H2F3|3BHS7_HUMAN 3 beta-hydroxysteroid dehydrogenase type 7 OS=Homo sapiens GN=HSD3B7 PE=1 SV=2 221 612 3.0E-07
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GO

GO Term Description Terminal node
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity Yes
GO:0006694 steroid biosynthetic process Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0016229 steroid dehydrogenase activity No
GO:0008610 lipid biosynthetic process No
GO:0044238 primary metabolic process No
GO:0006629 lipid metabolic process No
GO:0003824 catalytic activity No
GO:0009058 biosynthetic process No
GO:0008152 metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0003674 molecular_function No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0008202 steroid metabolic process No
GO:0008150 biological_process No
GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor No
GO:0016491 oxidoreductase activity No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 157 179 22
3 231 253 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|6239
MRFKTRDMTKASMTTSFKFWKASSCMKLLVMAVFALTAMGAVPDVRLPRPSASRRLSNPAVYLNVTTPSTTVLIN
ATLQEKPTEMTRPLSSSPSLPRPGLMSGPPFRNSTRDSHGMRPIRPHGYQACGNSTFLSAVPYCCNFGMGAADCK
PASSTSTTGMGVITIAALLVAACLFLYALHINRVMKQTPDEALAVVDPPLTPHQARIIYRRVKEHGIDWNANLPP
AKERRYLIVGGSGLVGGQIAVSLLATGVSRQAIRVVDLVPPVHDELSADKVAWVKADITSQASVDAAFAEPWPSA
VSDLPLTVFHTAAVIRPFERDPIFYPRCARVNVLGSAHVLAAARKAGAGILIFTSSCNAAGSAVNWLFPPWNRRP
REMAQRIGEDDYWKPLRPARCFPTTYAVSKAEAERMLCGADGADMRTAAIRPGNGVYGNRHDHIVSYMLALRVVP
TFAAPWVQNWANVHNVAQAHLLLEEALLGEHADRVAGRPFMISDDGPPLRFQDVYTMLETTSSTDFRVQHPPPVL
MLMAAYGIEAYCRLLARAGPLRRLLREPGDLVQMLQPGTISTTVTSLTDSSAARRRPDEGGLGYRPACTTLEGLS
AQLLEWNEASRGKGL*
Coding >Ophun1|6239
ATGCGCTTTAAGACGAGAGACATGACCAAGGCTTCGATGACGACATCATTCAAGTTCTGGAAGGCGAGCAGCTGC
ATGAAGCTCCTCGTCATGGCCGTCTTCGCCCTGACTGCGATGGGCGCCGTTCCAGACGTACGTCTGCCCAGGCCT
TCAGCCTCCAGACGATTGTCGAATCCAGCCGTGTATCTCAACGTAACGACGCCCAGCACAACGGTCCTGATCAAC
GCGACATTGCAGGAAAAACCGACAGAAATGACCAGGCCGCTTTCTTCCTCGCCGTCGCTGCCACGTCCCGGACTG
ATGAGCGGACCGCCCTTCAGGAACTCGACTCGTGACAGCCACGGGATGCGGCCCATCCGCCCGCACGGCTACCAG
GCCTGCGGCAACTCGACCTTTTTGAGTGCCGTTCCGTACTGCTGTAACTTCGGTATGGGAGCGGCGGATTGCAAA
CCCGCTTCGTCAACCTCGACGACCGGGATGGGCGTCATCACCATCGCCGCGCTGCTCGTGGCCGCGTGCCTCTTC
CTCTATGCCCTGCACATCAACCGCGTCATGAAGCAGACGCCGGACGAGGCTCTCGCCGTTGTTGATCCGCCTCTG
ACGCCTCATCAGGCCCGGATCATCTACCGGCGCGTCAAGGAGCATGGCATCGACTGGAACGCGAACCTGCCGCCA
GCCAAAGAAAGACGCTACCTCATTGTCGGTGGCTCCGGTCTCGTGGGCGGGCAGATCGCCGTCTCTCTGCTGGCA
ACGGGCGTGTCTCGTCAAGCCATACGGGTCGTGGACCTGGTTCCGCCCGTTCACGACGAGCTGAGCGCCGACAAG
GTGGCCTGGGTCAAGGCCGATATCACGTCACAGGCGTCGGTGGATGCCGCCTTCGCCGAGCCGTGGCCATCAGCT
GTCTCCGATCTACCGCTGACCGTCTTCCACACGGCCGCCGTCATCCGTCCCTTTGAGCGAGATCCCATCTTCTAC
CCTCGTTGCGCCCGCGTCAACGTCCTCGGCTCAGCACACGTTCTGGCAGCCGCACGCAAGGCCGGCGCCGGCATC
CTCATCTTCACGTCGAGCTGTAACGCGGCGGGAAGCGCCGTGAACTGGCTCTTCCCGCCTTGGAACCGACGTCCA
CGCGAGATGGCGCAGCGCATCGGCGAGGACGATTACTGGAAGCCGTTGCGTCCGGCTCGGTGTTTCCCCACCACG
TACGCCGTGTCCAAGGCCGAGGCGGAGCGAATGCTGTGTGGAGCCGACGGAGCCGATATGCGGACGGCGGCGATC
CGGCCGGGCAACGGCGTGTACGGCAACCGACACGACCACATAGTCAGCTACATGCTGGCGCTGCGGGTAGTTCCG
ACGTTTGCCGCTCCGTGGGTGCAGAACTGGGCCAACGTGCACAACGTCGCGCAGGCACATTTACTTCTCGAGGAG
GCGCTGCTGGGCGAGCACGCAGATCGGGTAGCGGGACGGCCGTTCATGATATCAGACGACGGTCCGCCGCTCCGG
TTCCAGGACGTTTACACGATGCTCGAGACGACGAGCTCGACCGACTTCCGGGTGCAGCATCCGCCGCCGGTGCTG
ATGCTGATGGCGGCGTACGGCATCGAGGCCTACTGCCGGCTGCTGGCGAGGGCGGGTCCGCTGCGGCGACTGCTA
CGGGAGCCGGGTGACTTGGTGCAGATGCTGCAGCCGGGAACGATTTCGACGACGGTGACGAGCCTGACGGACAGT
TCGGCGGCGAGGCGGAGGCCGGACGAGGGCGGGCTGGGCTACCGGCCGGCGTGTACGACGCTGGAGGGACTGAGC
GCGCAGCTGCTGGAGTGGAACGAGGCCAGCAGGGGCAAGGGGTTGTAG
Transcript >Ophun1|6239
ATGCGCTTTAAGACGAGAGACATGACCAAGGCTTCGATGACGACATCATTCAAGTTCTGGAAGGCGAGCAGCTGC
ATGAAGCTCCTCGTCATGGCCGTCTTCGCCCTGACTGCGATGGGCGCCGTTCCAGACGTACGTCTGCCCAGGCCT
TCAGCCTCCAGACGATTGTCGAATCCAGCCGTGTATCTCAACGTAACGACGCCCAGCACAACGGTCCTGATCAAC
GCGACATTGCAGGAAAAACCGACAGAAATGACCAGGCCGCTTTCTTCCTCGCCGTCGCTGCCACGTCCCGGACTG
ATGAGCGGACCGCCCTTCAGGAACTCGACTCGTGACAGCCACGGGATGCGGCCCATCCGCCCGCACGGCTACCAG
GCCTGCGGCAACTCGACCTTTTTGAGTGCCGTTCCGTACTGCTGTAACTTCGGTATGGGAGCGGCGGATTGCAAA
CCCGCTTCGTCAACCTCGACGACCGGGATGGGCGTCATCACCATCGCCGCGCTGCTCGTGGCCGCGTGCCTCTTC
CTCTATGCCCTGCACATCAACCGCGTCATGAAGCAGACGCCGGACGAGGCTCTCGCCGTTGTTGATCCGCCTCTG
ACGCCTCATCAGGCCCGGATCATCTACCGGCGCGTCAAGGAGCATGGCATCGACTGGAACGCGAACCTGCCGCCA
GCCAAAGAAAGACGCTACCTCATTGTCGGTGGCTCCGGTCTCGTGGGCGGGCAGATCGCCGTCTCTCTGCTGGCA
ACGGGCGTGTCTCGTCAAGCCATACGGGTCGTGGACCTGGTTCCGCCCGTTCACGACGAGCTGAGCGCCGACAAG
GTGGCCTGGGTCAAGGCCGATATCACGTCACAGGCGTCGGTGGATGCCGCCTTCGCCGAGCCGTGGCCATCAGCT
GTCTCCGATCTACCGCTGACCGTCTTCCACACGGCCGCCGTCATCCGTCCCTTTGAGCGAGATCCCATCTTCTAC
CCTCGTTGCGCCCGCGTCAACGTCCTCGGCTCAGCACACGTTCTGGCAGCCGCACGCAAGGCCGGCGCCGGCATC
CTCATCTTCACGTCGAGCTGTAACGCGGCGGGAAGCGCCGTGAACTGGCTCTTCCCGCCTTGGAACCGACGTCCA
CGCGAGATGGCGCAGCGCATCGGCGAGGACGATTACTGGAAGCCGTTGCGTCCGGCTCGGTGTTTCCCCACCACG
TACGCCGTGTCCAAGGCCGAGGCGGAGCGAATGCTGTGTGGAGCCGACGGAGCCGATATGCGGACGGCGGCGATC
CGGCCGGGCAACGGCGTGTACGGCAACCGACACGACCACATAGTCAGCTACATGCTGGCGCTGCGGGTAGTTCCG
ACGTTTGCCGCTCCGTGGGTGCAGAACTGGGCCAACGTGCACAACGTCGCGCAGGCACATTTACTTCTCGAGGAG
GCGCTGCTGGGCGAGCACGCAGATCGGGTAGCGGGACGGCCGTTCATGATATCAGACGACGGTCCGCCGCTCCGG
TTCCAGGACGTTTACACGATGCTCGAGACGACGAGCTCGACCGACTTCCGGGTGCAGCATCCGCCGCCGGTGCTG
ATGCTGATGGCGGCGTACGGCATCGAGGCCTACTGCCGGCTGCTGGCGAGGGCGGGTCCGCTGCGGCGACTGCTA
CGGGAGCCGGGTGACTTGGTGCAGATGCTGCAGCCGGGAACGATTTCGACGACGGTGACGAGCCTGACGGACAGT
TCGGCGGCGAGGCGGAGGCCGGACGAGGGCGGGCTGGGCTACCGGCCGGCGTGTACGACGCTGGAGGGACTGAGC
GCGCAGCTGCTGGAGTGGAACGAGGCCAGCAGGGGCAAGGGGTTGTAG
Gene >Ophun1|6239
ATGCGCTTTAAGACGAGAGACATGACCAAGGCTTCGATGACGACATCATTCAAGTTCTGGAAGGCGAGCAGCTGG
TAAACACGGCCTACTCTCCTCGTGGACGAACGACTGAGACTTGGATGACGGCATTATTCAGAGTCTAGACTGCGA
GCAGCTGACGATAAATACGGCCGACTCCCCTCGTAGACGAACGATTCCTATCCCTCCCCGCTCCTCAAACATCCA
TCGACAGCATGAAGCTCCTCGTCATGGCCGTCTTCGCCCTGACTGCGATGGGCGCCGTTCCAGACGTACGTCTGC
CCAGGCCTTCAGCCTCCAGACGATTGTCGAATCCAGCCGTGTATCTCAACGTAACGACGCCCAGCACAACGGTCC
TGATCAACGCGACATTGCAGGAAAAACCGACAGAAATGACCAGGCCGCTTTCTTCCTCGCCGTCGCTGCCACGTC
CCGGACTGATGAGCGGACCGCCCTTCAGGAACTCGACTCGTGACAGCCACGGGATGCGGCCCATCCGCCCGCACG
GCTACCAGGCCTGCGGCAACTCGACCTTTTTGAGTGCCGTTCCGTACTGCTGTAACTTCGGTATGGGAGCGGCGG
ATTGCAAACCCGGTACGTCGAGCCCCGTTCTCGTAGTCTGTCTCTCCTGTGCTGATGGGGGTCTTCTTCGGGCTT
GCCAGCGACGGGAGAGCCTACCAGCTCCGGTAGCTTCATCAGCATGTGTCAGCCTCAGGGCCAGCCCAAGTGCTG
TTTCAAAAGCTTCAACGTAGGTGGAATGGATCCTGGTGACGGCTGATTGTGTTTGCTGACCATGGCTGGAAGGGG
GTGCTCATGTGTCTCGGTTATGTCGACCGGTGAGAGGGAGCAAGAGAGCAGAGGGGACGATGGTTGTAATGCAGG
AGAGAGAGAGGGTCCGAGAAGAGTAAATAACTCTAGTGGAGGAGGGCAGAGTTGGGTATGACTATGAGGCAGGGT
TGTAGTCTGTGGTAGACTGGCACGTGATGAGGCCGTTGAGGCGGCTCTGTGCCGAGCACGAATATTCGTAGCTTA
ATCGATTCACGGAAAAAATCTCACTTTCATCTCACTTCACTCATCATGTCGTGACCATCGCCGCTGTTCATCTCT
CCTCTTGACCCTGCAGCTTCGTCAACCTCGACGACCGGGATGGGCGTCATCACCATCGCCGCGCTGCTCGTGGCC
GCGTGCCTCTTCCTCTATGCCCTGCACATCAACCGCGTCATGAAGCAGACGCCGGACGAGGCTCTCGCCGTTGTT
GATCCGCCTCTGACGCCTCATCAGGCCCGGATCATCTACCGGCGCGTCAAGGAGCATGGCATCGACTGGAACGCG
AACCTGCCGCCAGCCAAAGAAAGACGCTACCTCATTGTCGGTGGCTCCGGTGAGCTTATCCAAGTCCTCGTTGTC
TTTCCTCGTTGTCTTGGCTATGTTTCGGAGCTGACTGAGTCGCCATTCAACAGGTCTCGTGGGCGGGCAGATCGC
CGTCTCTCTGCTGGCAACGGGCGTGTCTCGTCAAGCCATACGGGTCGTGGACCTGGTTCCGCCCGTTCACGACGA
GCTGAGCGCCGACAAGGTGGCCTGGGTCAAGGCCGATATCACGTCACAGGCGTCGGTGGATGCCGCCTTCGCCGA
GCCGTGGCCATCAGCTGTCTCCGATCTACCGCTGACCGTCTTCCACACGGCCGCCGTCATCCGTCCCTTTGAGCG
AGATCCCATCTTCTACCCTCGTTGCGCCCGCGTCAACGTCCTCGGCTCAGCACACGTTCTGGCAGCCGCACGCAA
GGCCGGCGCCGGCATCCTCATCTTCACGTCGAGCTGTAACGCGGCGGGAAGCGCCGTGAACTGGCTCTTCCCGCC
TTGGAACCGACGTCCACGCGAGATGGCGCAGCGCATCGGCGAGGACGATTACTGGAAGCCGTTGCGTCCGGCTCG
GTGTTTCCCCACCACGTACGCCGTGTCCAAGGCCGAGGCGGAGCGAATGCTGTGTGGAGCCGACGGAGCCGATAT
GCGGACGGCGGCGATCCGGCCGGGCAACGGCGTGTACGGCAACCGACACGACCACATAGTCAGCTACATGCTGGC
GCTGCGGGTAGTTCCGACGTTTGCCGCTCCGTGGGTGCAGAACTGGGCCAACGTGCACAACGTCGCGCAGGCACA
TTTACTTCTCGAGGAGGCGCTGCTGGGCGAGCACGCAGATCGGGTAGCGGGACGGCCGTTCATGATATCAGACGA
CGGTCCGCCGCTCCGGTTCCAGGACGTTTACACGATGCTCGAGACGACGAGCTCGACCGACTTCCGGGTGCAGCA
TCCGCCGCCGGTGCTGATGCTGATGGCGGCGTACGGCATCGAGGCCTACTGCCGGCTGCTGGCGAGGGCGGGTCC
GCTGCGGCGACTGCTACGGGAGCCGGGTGACTTGGTGCAGATGCTGCAGCCGGGAACGATTTCGACGACGGTGAC
GAGCCTGACGGACAGTTCGGCGGCGAGGCGGAGGCCGGACGAGGGCGGGCTGGGCTACCGGCCGGCGTGTACGAC
GCTGGAGGGACTGAGCGCGCAGCTGCTGGAGTGGAACGAGGCCAGCAGGGGCAAGGGGTTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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