Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|6233
Gene name
Location	Contig_669:5697..8020
Strand	+
Gene length (bp)	2323
Transcript length (bp)	2223
Coding sequence length (bp)	2223
Protein length (aa)	741

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05285	SDA1	SDA1	2.8E-85	422	733
PF08158	NUC130_3NT	NUC130/3NT domain	3.0E-23	70	120

Swissprot hits

[Show all]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q10342\|SDA1_SCHPO	Protein sda1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sda1 PE=3 SV=2	1	732	2.0E-175
sp\|P53313\|SDA1_YEAST	Protein SDA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDA1 PE=1 SV=1	1	734	3.0E-160
sp\|Q9NVU7\|SDA1_HUMAN	Protein SDA1 homolog OS=Homo sapiens GN=SDAD1 PE=1 SV=3	11	724	9.0E-125
sp\|Q5XIQ5\|SDA1_RAT	Protein SDA1 homolog OS=Rattus norvegicus GN=Sdad1 PE=1 SV=1	11	724	4.0E-118
sp\|A5D7C2\|SDA1_BOVIN	Protein SDA1 homolog OS=Bos taurus GN=SDAD1 PE=2 SV=1	11	724	5.0E-118

[Show all]

[Show less]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q10342\|SDA1_SCHPO	Protein sda1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sda1 PE=3 SV=2	1	732	2.0E-175
sp\|P53313\|SDA1_YEAST	Protein SDA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDA1 PE=1 SV=1	1	734	3.0E-160
sp\|Q9NVU7\|SDA1_HUMAN	Protein SDA1 homolog OS=Homo sapiens GN=SDAD1 PE=1 SV=3	11	724	9.0E-125
sp\|Q5XIQ5\|SDA1_RAT	Protein SDA1 homolog OS=Rattus norvegicus GN=Sdad1 PE=1 SV=1	11	724	4.0E-118
sp\|A5D7C2\|SDA1_BOVIN	Protein SDA1 homolog OS=Bos taurus GN=SDAD1 PE=2 SV=1	11	724	5.0E-118
sp\|Q6NV26\|SDA1_DANRE	Protein SDA1 homolog OS=Danio rerio GN=sdad1 PE=2 SV=1	11	724	2.0E-115
sp\|Q80UZ2\|SDA1_MOUSE	Protein SDA1 homolog OS=Mus musculus GN=Sdad1 PE=1 SV=1	11	724	5.0E-115
sp\|A7S6A5\|SDA1_NEMVE	Protein SDA1 homolog OS=Nematostella vectensis GN=sdad1 PE=3 SV=1	11	732	4.0E-112
sp\|Q2VPG3\|SDA1_XENLA	Protein SDA1 homolog OS=Xenopus laevis GN=sdad1 PE=2 SV=1	11	724	9.0E-105
sp\|A4IIB1\|SDA1_XENTR	Protein SDA1 homolog OS=Xenopus tropicalis GN=sdad1 PE=2 SV=1	11	724	4.0E-104
sp\|Q7KKH3\|SDA1_DROME	Protein SDA1 homolog OS=Drosophila melanogaster GN=Mys45A PE=1 SV=1	11	559	1.0E-96
sp\|Q55DE2\|SDA1_DICDI	Protein SDA1 homolog OS=Dictyostelium discoideum GN=sdad1 PE=3 SV=1	15	551	1.0E-94
sp\|Q9NEU2\|SDA1_CAEEL	Protein SDA1 homolog OS=Caenorhabditis elegans GN=pro-3 PE=1 SV=4	19	467	7.0E-73

[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 58	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|6233 MVKRKVAALEKLDADFASLQYKIRRDPKSYKDDFLRQWEQYESQREIFLSSPTTASADSVESFHNMVDLMAHVAD CYPEETKAFPDDLKAILAQHHAALHPDLREKVVGSLVLLRRKDVIDSTSLLTTLFPILVSSPSKTLRELLFNKIV SDLRNSNTRSINHPLNRTIQTVLYNLVVADRSSPRALWAVKLTRELWKRHIWNDAKPVDVMKEACLADNEKVAVG AARFFLGGDKEREELEDESSDEDDVDLTKVRHQIGINKKSKKQKEAYKKAVSKVKRSERKKSKPHPLNFSALHLL HDPQTFAEQLFSKHLQNTKAKLSLDSKLLILQLVTRLVGLHRLTVITLYSWFIKFLTPRQQSVTSFLASLAQGTH DLVPPDVLEPLLQKIANEFVSEASAAEVAAAGLNAIREICARQPLAMTEALLQDLVQYRKSKDKGVMMAAKGLLS LYREVGAELLKKRDRGKDASIGLKEGLQQQRKFGEEQADGIDGLHLLLKWKEEERKRKRTEAGLSATGEDDEKDG EDDDDDSSGWEVDSDDGSSSGGEWITVEHSDDEAPAVKRQKKTGEEDDDGDGDKDGEVDEEMALRTSKLATTTIL TPADLAKLQELRTAAAVGTAMGRNKPQGATEGRHADDGVTAEKIEAPARLRKLSKEEKLALAKEGKPDREEHKST QAIRKSKKEAAGKSTSNREKQRKKNFLMTLGKAKSKQKRSLVEARKVLRGHVERSSRGGRRRNGR*
Coding	>Ophun1\|6233 ATGGTCAAAAGAAAGGTCGCGGCGCTCGAAAAGCTCGATGCCGATTTCGCGAGTCTGCAATACAAGATCCGGCGT GACCCCAAATCCTACAAAGACGACTTCCTCAGACAGTGGGAGCAATATGAGAGCCAACGCGAAATCTTTCTCTCG TCACCGACGACAGCCTCGGCCGACTCGGTCGAGTCCTTCCACAATATGGTCGATCTAATGGCGCACGTCGCCGAC TGCTACCCCGAAGAGACCAAGGCCTTTCCAGACGACCTCAAGGCGATCCTGGCGCAGCACCATGCGGCTCTGCAT CCGGACCTGCGCGAAAAGGTGGTGGGCAGCCTCGTGTTGCTGCGGCGCAAGGACGTCATCGACTCGACGAGCCTC CTTACCACGCTCTTCCCCATTCTCGTCTCTTCGCCGAGCAAGACGCTACGCGAACTGCTCTTCAACAAGATTGTC AGCGACTTGCGCAACTCCAATACTCGGTCCATCAACCACCCGCTCAACCGGACGATCCAGACCGTCTTGTACAAC CTCGTTGTCGCCGACAGAAGCTCGCCCCGCGCTCTCTGGGCCGTCAAGCTGACGCGCGAGCTGTGGAAGCGCCAC ATCTGGAACGATGCCAAGCCGGTCGACGTCATGAAGGAGGCATGTCTGGCCGACAACGAAAAGGTGGCCGTCGGC GCCGCGCGCTTCTTCCTCGGCGGCGACAAGGAGCGGGAGGAGCTCGAGGACGAGAGCAGCGACGAAGACGACGTG GACCTGACCAAGGTCCGGCATCAGATTGGCATCAACAAGAAGTCCAAGAAGCAGAAGGAGGCTTACAAAAAGGCC GTGTCCAAGGTCAAGAGGAGTGAGCGCAAGAAGAGCAAGCCTCATCCGCTCAACTTTTCCGCCTTGCACCTGCTT CACGATCCTCAGACCTTTGCCGAGCAGCTCTTCTCCAAGCACCTGCAAAACACAAAAGCCAAGCTATCACTCGAC AGCAAGCTGCTCATACTGCAGCTAGTGACGCGCCTGGTCGGTCTGCACCGTCTGACCGTCATCACACTCTACTCG TGGTTCATCAAGTTCCTCACGCCGCGCCAGCAGTCCGTCACGTCCTTCTTGGCGTCGCTGGCGCAGGGTACGCAC GACCTGGTGCCACCGGACGTGCTGGAGCCGCTACTGCAGAAGATTGCCAACGAGTTTGTGTCGGAGGCTTCGGCG GCGGAGGTGGCGGCGGCAGGCCTCAACGCGATCCGGGAGATATGCGCCAGGCAGCCGCTGGCCATGACGGAGGCG CTGCTGCAAGACCTTGTCCAATACCGCAAGAGCAAGGACAAGGGCGTCATGATGGCCGCCAAGGGGTTACTGTCT CTATACAGAGAAGTCGGTGCCGAGCTCCTCAAGAAGAGGGACCGAGGGAAAGATGCCAGCATTGGGCTCAAGGAG GGTCTGCAACAGCAGCGCAAGTTTGGCGAGGAGCAAGCCGACGGCATTGACGGGCTTCATCTGCTGCTCAAGTGG AAGGAGGAGGAGCGCAAGCGGAAGCGTACCGAAGCAGGCCTCTCAGCGACGGGTGAAGACGACGAGAAAGACGGT GAAGACGACGACGACGACTCGAGCGGATGGGAGGTCGACTCGGATGACGGCAGCAGCTCCGGCGGCGAATGGATC ACGGTGGAGCATTCTGATGACGAGGCGCCGGCGGTCAAGAGGCAGAAGAAGACGGGCGAAGAGGATGACGATGGC GACGGCGACAAGGACGGGGAAGTGGACGAGGAGATGGCTCTACGGACGTCGAAGCTGGCCACGACGACGATCCTC ACGCCGGCGGACCTGGCCAAGCTACAGGAGCTCCGGACGGCGGCGGCAGTAGGGACAGCCATGGGCCGCAACAAG CCACAGGGGGCGACGGAGGGGCGACACGCCGATGACGGCGTCACAGCGGAAAAGATCGAAGCGCCGGCTCGGCTG CGCAAGCTGAGCAAGGAGGAGAAGCTGGCGCTGGCCAAGGAGGGCAAGCCGGACAGGGAGGAACACAAGAGTACG CAGGCGATCCGCAAGTCGAAGAAGGAGGCGGCGGGCAAGAGCACGAGCAACCGGGAGAAGCAGCGGAAGAAGAAC TTTTTGATGACGCTGGGCAAGGCCAAGAGCAAGCAAAAGAGGAGCCTGGTGGAGGCTCGCAAGGTTCTGAGAGGC CACGTGGAGAGGAGCTCACGGGGGGGGCGGAGGAGGAACGGACGATGA
Transcript	>Ophun1\|6233 ATGGTCAAAAGAAAGGTCGCGGCGCTCGAAAAGCTCGATGCCGATTTCGCGAGTCTGCAATACAAGATCCGGCGT GACCCCAAATCCTACAAAGACGACTTCCTCAGACAGTGGGAGCAATATGAGAGCCAACGCGAAATCTTTCTCTCG TCACCGACGACAGCCTCGGCCGACTCGGTCGAGTCCTTCCACAATATGGTCGATCTAATGGCGCACGTCGCCGAC TGCTACCCCGAAGAGACCAAGGCCTTTCCAGACGACCTCAAGGCGATCCTGGCGCAGCACCATGCGGCTCTGCAT CCGGACCTGCGCGAAAAGGTGGTGGGCAGCCTCGTGTTGCTGCGGCGCAAGGACGTCATCGACTCGACGAGCCTC CTTACCACGCTCTTCCCCATTCTCGTCTCTTCGCCGAGCAAGACGCTACGCGAACTGCTCTTCAACAAGATTGTC AGCGACTTGCGCAACTCCAATACTCGGTCCATCAACCACCCGCTCAACCGGACGATCCAGACCGTCTTGTACAAC CTCGTTGTCGCCGACAGAAGCTCGCCCCGCGCTCTCTGGGCCGTCAAGCTGACGCGCGAGCTGTGGAAGCGCCAC ATCTGGAACGATGCCAAGCCGGTCGACGTCATGAAGGAGGCATGTCTGGCCGACAACGAAAAGGTGGCCGTCGGC GCCGCGCGCTTCTTCCTCGGCGGCGACAAGGAGCGGGAGGAGCTCGAGGACGAGAGCAGCGACGAAGACGACGTG GACCTGACCAAGGTCCGGCATCAGATTGGCATCAACAAGAAGTCCAAGAAGCAGAAGGAGGCTTACAAAAAGGCC GTGTCCAAGGTCAAGAGGAGTGAGCGCAAGAAGAGCAAGCCTCATCCGCTCAACTTTTCCGCCTTGCACCTGCTT CACGATCCTCAGACCTTTGCCGAGCAGCTCTTCTCCAAGCACCTGCAAAACACAAAAGCCAAGCTATCACTCGAC AGCAAGCTGCTCATACTGCAGCTAGTGACGCGCCTGGTCGGTCTGCACCGTCTGACCGTCATCACACTCTACTCG TGGTTCATCAAGTTCCTCACGCCGCGCCAGCAGTCCGTCACGTCCTTCTTGGCGTCGCTGGCGCAGGGTACGCAC GACCTGGTGCCACCGGACGTGCTGGAGCCGCTACTGCAGAAGATTGCCAACGAGTTTGTGTCGGAGGCTTCGGCG GCGGAGGTGGCGGCGGCAGGCCTCAACGCGATCCGGGAGATATGCGCCAGGCAGCCGCTGGCCATGACGGAGGCG CTGCTGCAAGACCTTGTCCAATACCGCAAGAGCAAGGACAAGGGCGTCATGATGGCCGCCAAGGGGTTACTGTCT CTATACAGAGAAGTCGGTGCCGAGCTCCTCAAGAAGAGGGACCGAGGGAAAGATGCCAGCATTGGGCTCAAGGAG GGTCTGCAACAGCAGCGCAAGTTTGGCGAGGAGCAAGCCGACGGCATTGACGGGCTTCATCTGCTGCTCAAGTGG AAGGAGGAGGAGCGCAAGCGGAAGCGTACCGAAGCAGGCCTCTCAGCGACGGGTGAAGACGACGAGAAAGACGGT GAAGACGACGACGACGACTCGAGCGGATGGGAGGTCGACTCGGATGACGGCAGCAGCTCCGGCGGCGAATGGATC ACGGTGGAGCATTCTGATGACGAGGCGCCGGCGGTCAAGAGGCAGAAGAAGACGGGCGAAGAGGATGACGATGGC GACGGCGACAAGGACGGGGAAGTGGACGAGGAGATGGCTCTACGGACGTCGAAGCTGGCCACGACGACGATCCTC ACGCCGGCGGACCTGGCCAAGCTACAGGAGCTCCGGACGGCGGCGGCAGTAGGGACAGCCATGGGCCGCAACAAG CCACAGGGGGCGACGGAGGGGCGACACGCCGATGACGGCGTCACAGCGGAAAAGATCGAAGCGCCGGCTCGGCTG CGCAAGCTGAGCAAGGAGGAGAAGCTGGCGCTGGCCAAGGAGGGCAAGCCGGACAGGGAGGAACACAAGAGTACG CAGGCGATCCGCAAGTCGAAGAAGGAGGCGGCGGGCAAGAGCACGAGCAACCGGGAGAAGCAGCGGAAGAAGAAC TTTTTGATGACGCTGGGCAAGGCCAAGAGCAAGCAAAAGAGGAGCCTGGTGGAGGCTCGCAAGGTTCTGAGAGGC CACGTGGAGAGGAGCTCACGGGGGGGGCGGAGGAGGAACGGACGATGA
Gene	>Ophun1\|6233 ATGGTCAAAAGAAAGGTCGCGGCGCTCGAAAAGCTCGATGCCGATTTGTGAGACTTGCATCTCGTCCCTCAATTC TTCCTAGCTGACACTTCCCAGCGCGAGTCTGCAATACAAGATCCGGCGTGACCCCAAGTAAGAGAGAAAGAGGCC GACATGCTGAAGACGACTGACGCTCTCCCGCAGATCCTACAAAGACGACTTCCTCAGACAGTGGGAGCAATATGA GAGCCAACGCGAAATCTTTCTCTCGTCACCGACGACAGCCTCGGCCGACTCGGTCGAGTCCTTCCACAATATGGT CGATCTAATGGCGCACGTCGCCGACTGCTACCCCGAAGAGACCAAGGCCTTTCCAGACGACCTCAAGGCGATCCT GGCGCAGCACCATGCGGCTCTGCATCCGGACCTGCGCGAAAAGGTGGTGGGCAGCCTCGTGTTGCTGCGGCGCAA GGACGTCATCGACTCGACGAGCCTCCTTACCACGCTCTTCCCCATTCTCGTCTCTTCGCCGAGCAAGACGCTACG CGAACTGCTCTTCAACAAGATTGTCAGCGACTTGCGCAACTCCAATACTCGGTCCATCAACCACCCGCTCAACCG GACGATCCAGACCGTCTTGTACAACCTCGTTGTCGCCGACAGAAGCTCGCCCCGCGCTCTCTGGGCCGTCAAGCT GACGCGCGAGCTGTGGAAGCGCCACATCTGGAACGATGCCAAGCCGGTCGACGTCATGAAGGAGGCATGTCTGGC CGACAACGAAAAGGTGGCCGTCGGCGCCGCGCGCTTCTTCCTCGGCGGCGACAAGGAGCGGGAGGAGCTCGAGGA CGAGAGCAGCGACGAAGACGACGTGGACCTGACCAAGGTCCGGCATCAGATTGGCATCAACAAGAAGTCCAAGAA GCAGAAGGAGGCTTACAAAAAGGCCGTGTCCAAGGTCAAGAGGAGTGAGCGCAAGAAGAGCAAGCCTCATCCGCT CAACTTTTCCGCCTTGCACCTGCTTCACGATCCTCAGACCTTTGCCGAGCAGCTCTTCTCCAAGCACCTGCAAAA CACAAAAGCCAAGCTATCACTCGACAGCAAGCTGCTCATACTGCAGCTAGTGACGCGCCTGGTCGGTCTGCACCG TCTGACCGTCATCACACTCTACTCGTGGTTCATCAAGTTCCTCACGCCGCGCCAGCAGTCCGTCACGTCCTTCTT GGCGTCGCTGGCGCAGGGTACGCACGACCTGGTGCCACCGGACGTGCTGGAGCCGCTACTGCAGAAGATTGCCAA CGAGTTTGTGTCGGAGGCTTCGGCGGCGGAGGTGGCGGCGGCAGGCCTCAACGCGATCCGGGAGATATGCGCCAG GCAGCCGCTGGCCATGACGGAGGCGCTGCTGCAAGACCTTGTCCAATACCGCAAGAGCAAGGACAAGGGCGTCAT GATGGCCGCCAAGGGGTTACTGTCTCTATACAGAGAAGTCGGTGCCGAGCTCCTCAAGAAGAGGGACCGAGGGAA AGATGCCAGCATTGGGCTCAAGGAGGGTCTGCAACAGCAGCGCAAGTTTGGCGAGGAGCAAGCCGACGGCATTGA CGGGCTTCATCTGCTGCTCAAGTGGAAGGAGGAGGAGCGCAAGCGGAAGCGTACCGAAGCAGGCCTCTCAGCGAC GGGTGAAGACGACGAGAAAGACGGTGAAGACGACGACGACGACTCGAGCGGATGGGAGGTCGACTCGGATGACGG CAGCAGCTCCGGCGGCGAATGGATCACGGTGGAGCATTCTGATGACGAGGCGCCGGCGGTCAAGAGGCAGAAGAA GACGGGCGAAGAGGATGACGATGGCGACGGCGACAAGGACGGGGAAGTGGACGAGGAGATGGCTCTACGGACGTC GAAGCTGGCCACGACGACGATCCTCACGCCGGCGGACCTGGCCAAGCTACAGGAGCTCCGGACGGCGGCGGCAGT AGGGACAGCCATGGGCCGCAACAAGCCACAGGGGGCGACGGAGGGGCGACACGCCGATGACGGCGTCACAGCGGA AAAGATCGAAGCGCCGGCTCGGCTGCGCAAGCTGAGCAAGGAGGAGAAGCTGGCGCTGGCCAAGGAGGGCAAGCC GGACAGGGAGGAACACAAGAGTACGCAGGCGATCCGCAAGTCGAAGAAGGAGGCGGCGGGCAAGAGCACGAGCAA CCGGGAGAAGCAGCGGAAGAAGAACTTTTTGATGACGCTGGGCAAGGCCAAGAGCAAGCAAAAGAGGAGCCTGGT GGAGGCTCGCAAGGTTCTGAGAGGCCACGTGGAGAGGAGCTCACGGGGGGGGCGGAGGAGGAACGGACGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail