Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|6225
Gene name
LocationContig_667:7206..9824
Strand+
Gene length (bp)2618
Transcript length (bp)2034
Coding sequence length (bp)2034
Protein length (aa) 678

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 2.3E-12 311 476

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|A1DIC0|XLNR_NEOFI Xylanolytic transcriptional activator xlnR OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=xlnR PE=3 SV=2 157 659 7.0E-86
sp|B0XUL1|XLNR_ASPFC Xylanolytic transcriptional activator xlnR OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=xlnR PE=3 SV=1 157 659 5.0E-84
sp|Q4WZV6|XLNR_ASPFU Xylanolytic transcriptional activator xlnR OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=xlnR PE=3 SV=1 157 659 6.0E-84
sp|Q0CV52|XLNR_ASPTN Xylanolytic transcriptional activator xlnR OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=xlnR PE=3 SV=2 157 660 2.0E-82
sp|Q2UD93|XLNR_ASPOR Xylanolytic transcriptional activator xlnR OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xlnR PE=1 SV=2 157 659 7.0E-82
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|A1DIC0|XLNR_NEOFI Xylanolytic transcriptional activator xlnR OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=xlnR PE=3 SV=2 157 659 7.0E-86
sp|B0XUL1|XLNR_ASPFC Xylanolytic transcriptional activator xlnR OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=xlnR PE=3 SV=1 157 659 5.0E-84
sp|Q4WZV6|XLNR_ASPFU Xylanolytic transcriptional activator xlnR OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=xlnR PE=3 SV=1 157 659 6.0E-84
sp|Q0CV52|XLNR_ASPTN Xylanolytic transcriptional activator xlnR OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=xlnR PE=3 SV=2 157 660 2.0E-82
sp|Q2UD93|XLNR_ASPOR Xylanolytic transcriptional activator xlnR OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xlnR PE=1 SV=2 157 659 7.0E-82
sp|B8N6M6|XLNR_ASPFN Xylanolytic transcriptional activator xlnR OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=xlnR PE=3 SV=1 157 659 7.0E-82
sp|G4MZJ4|XLNR_MAGO7 Xylanolytic transcriptional activator xlnR homolog OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=xlr1 PE=3 SV=1 157 659 2.0E-81
sp|Q5AVS0|XLNR_EMENI Xylanolytic transcriptional activator xlnR OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=xlnR PE=2 SV=2 157 659 4.0E-81
sp|O42804|XLNR_ASPNG Xylanolytic transcriptional activator xlnR OS=Aspergillus niger GN=xlnR PE=1 SV=2 157 659 1.0E-78
sp|A2R5W7|XLNR_ASPNC Xylanolytic transcriptional activator xlnR OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=xlnR PE=3 SV=2 157 659 1.0E-78
sp|Q96WP8|XLNR_ASPKA Xylanolytic transcriptional activator xlnR OS=Aspergillus kawachii GN=xlnR PE=3 SV=2 157 659 1.0E-77
sp|A1C7P9|XLNR_ASPCL Xylanolytic transcriptional activator xlnR OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=xlnR PE=3 SV=2 157 659 5.0E-76
sp|A2QJX5|ARAR_ASPNC Arabinanolytic transcriptional activator araR OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=araR PE=3 SV=1 138 659 2.0E-61
sp|Q5BGE2|ARAR_EMENI Arabinolytic transcriptional activator araR OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN0388 PE=3 SV=1 133 659 9.0E-56
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GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0043170 macromolecule metabolic process No
GO:0044237 cellular metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0097159 organic cyclic compound binding No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0046872 metal ion binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0097659 nucleic acid-templated transcription No
GO:0008152 metabolic process No
GO:0009058 biosynthetic process No
GO:0009987 cellular process No
GO:1901363 heterocyclic compound binding No
GO:0044238 primary metabolic process No
GO:0046914 transition metal ion binding No
GO:0006807 nitrogen compound metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0016070 RNA metabolic process No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0003676 nucleic acid binding No
GO:0043169 cation binding No
GO:0009059 macromolecule biosynthetic process No
GO:0005488 binding No
GO:0008150 biological_process No
GO:0032774 RNA biosynthetic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0003674 molecular_function No
GO:0044249 cellular biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0043167 ion binding No
GO:0090304 nucleic acid metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 602 624 22

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|6225
MANASKTASSVAALIGLNKHDDAPHRGHHHREGGDNPQHQLMAGRSAHAMSIPSLTQAALHPSPRPLLSADGPLS
RSRAASSSASAAPDDMLNSDDSASYASPANAAPSTDLDGRRASFRSAASHDPPRESVSRATSAPDGSLLDVLHQA
PSDECCYRFLDPVLPFIRRIIPASVACELLDIFLTDPGSSLFRGASPYILTRVFRKRSITHPTSPRPTTPALLAT
ILWCVAQTADVMLLHVPGTRARVVNDLYDLATALISDRDPDRWRRIHGGLRAESEVPHPSLPTPTSVPMTTAANE
PAGVVDDVLTFILLSIAVSGSDFKSDCYKWWSKAVRLALSLRLNREDERCSAPVSPCANPLCSCHRDAANREASL
AEVERREERRRVFWLLYSLDRHLSLSFNTVLSMPDSYCEVFAPLPETVWERLEDVTPREMPPRVLGPPILASGTG
FFEYFLPIMAILGDIIEVHHRRRHPRLGDQVDDSHAVSVIQKLLASYEMSLDSLTVPSRDLVTGLSTPVLHQDGI
RLAAYDAADHTKVRLVKAYSTHMLHVLHVLLHGKWDAISMLDDGEDWITSKRFTECATHAISASQSVSTILAIDP
ELTFMSYLFGIYLLQGSFVLLLFADRMPQLGPNESVEQACENIIRAHEVCVVTLSTEFQVSLLGPLSVASGAEER
RL*
Coding >Ophun1|6225
ATGGCGAATGCGTCCAAGACGGCATCCTCCGTCGCAGCTCTCATCGGCCTCAACAAGCACGACGACGCTCCCCAC
CGCGGACACCACCACCGGGAGGGCGGAGACAATCCGCAACACCAGCTGATGGCGGGCCGCTCTGCCCACGCCATG
TCAATCCCCTCGCTGACCCAGGCCGCCCTTCACCCGTCTCCTCGCCCGCTGCTTTCCGCTGACGGGCCGCTGTCC
CGGTCTCGGGCCGCTTCATCGTCGGCCAGTGCCGCCCCCGACGATATGCTCAACTCGGACGACAGCGCCAGCTAT
GCTTCTCCCGCCAACGCCGCGCCCTCCACCGACCTCGATGGCAGACGGGCCTCATTCCGCTCGGCCGCCAGTCAT
GATCCGCCACGGGAGTCCGTCAGCAGGGCCACCTCGGCCCCGGACGGCTCCCTCCTCGACGTGCTGCACCAGGCT
CCTTCGGATGAGTGCTGCTATAGGTTCCTCGATCCTGTGTTACCGTTCATCCGTCGCATCATCCCCGCCTCGGTG
GCCTGCGAGCTGCTCGACATCTTCCTCACTGACCCGGGCAGCTCGCTGTTCCGGGGAGCCTCACCGTATATTCTC
ACCCGCGTCTTCAGAAAGCGATCCATCACCCATCCCACGAGCCCGAGACCCACGACGCCCGCCCTGCTGGCCACC
ATCCTGTGGTGCGTCGCTCAGACAGCCGATGTTATGCTGCTCCATGTGCCGGGCACCCGCGCGCGTGTCGTCAAC
GACCTATACGACCTGGCCACTGCGCTGATCTCTGATCGAGATCCCGACAGATGGAGACGGATCCACGGCGGCCTG
CGAGCTGAAAGCGAGGTCCCTCATCCCAGCCTTCCGACGCCGACGTCGGTGCCGATGACGACGGCAGCAAATGAG
CCGGCCGGCGTCGTCGACGACGTCCTCACCTTCATTCTGCTGTCCATCGCCGTGTCCGGGAGCGACTTCAAGTCC
GACTGTTACAAGTGGTGGTCCAAGGCGGTTCGGCTGGCGCTCTCGCTGCGACTCAACCGTGAAGACGAACGCTGC
TCAGCACCCGTCTCGCCCTGTGCCAACCCGCTATGCTCGTGTCACCGCGATGCCGCCAACAGAGAAGCATCGCTT
GCCGAAGTCGAGCGGCGCGAGGAGCGCAGGCGCGTCTTTTGGCTGCTCTACAGCCTCGATCGTCACCTCAGCCTA
TCCTTCAACACGGTCCTCTCCATGCCGGACTCGTACTGCGAGGTGTTTGCGCCGCTGCCCGAGACGGTGTGGGAG
AGGCTCGAAGACGTGACGCCCCGAGAAATGCCCCCGAGAGTCCTGGGCCCGCCGATTCTGGCCAGCGGCACGGGC
TTCTTCGAGTACTTTTTGCCCATCATGGCCATCCTCGGCGACATCATCGAGGTCCATCATCGGCGGCGACATCCG
CGGCTGGGTGACCAAGTCGACGACTCGCACGCCGTTTCCGTCATCCAGAAGCTGCTGGCCAGCTACGAGATGAGT
CTCGACTCGCTGACGGTCCCCAGCCGGGACCTTGTGACGGGGCTCTCGACGCCAGTACTGCACCAGGACGGCATC
CGGTTGGCGGCCTACGACGCGGCCGACCATACCAAGGTTCGACTGGTCAAGGCCTACAGCACGCACATGCTGCAC
GTCCTCCACGTGTTGTTGCACGGTAAATGGGACGCCATCTCGATGCTGGACGACGGCGAGGACTGGATCACGTCC
AAGCGCTTTACCGAGTGCGCGACGCACGCCATCTCGGCGTCGCAGTCGGTTTCGACGATCCTGGCCATCGACCCG
GAGCTGACTTTCATGTCGTACCTGTTTGGCATCTATCTGTTGCAGGGCAGCTTTGTTCTGCTTCTCTTTGCCGAC
CGCATGCCGCAACTAGGACCCAACGAATCGGTAGAGCAAGCATGCGAGAACATTATCCGCGCGCACGAGGTCTGC
GTCGTCACGCTGAGCACCGAGTTTCAGGTGAGTTTGCTTGGTCCTCTGAGTGTTGCGTCAGGGGCTGAAGAGAGG
CGTTTATAA
Transcript >Ophun1|6225
ATGGCGAATGCGTCCAAGACGGCATCCTCCGTCGCAGCTCTCATCGGCCTCAACAAGCACGACGACGCTCCCCAC
CGCGGACACCACCACCGGGAGGGCGGAGACAATCCGCAACACCAGCTGATGGCGGGCCGCTCTGCCCACGCCATG
TCAATCCCCTCGCTGACCCAGGCCGCCCTTCACCCGTCTCCTCGCCCGCTGCTTTCCGCTGACGGGCCGCTGTCC
CGGTCTCGGGCCGCTTCATCGTCGGCCAGTGCCGCCCCCGACGATATGCTCAACTCGGACGACAGCGCCAGCTAT
GCTTCTCCCGCCAACGCCGCGCCCTCCACCGACCTCGATGGCAGACGGGCCTCATTCCGCTCGGCCGCCAGTCAT
GATCCGCCACGGGAGTCCGTCAGCAGGGCCACCTCGGCCCCGGACGGCTCCCTCCTCGACGTGCTGCACCAGGCT
CCTTCGGATGAGTGCTGCTATAGGTTCCTCGATCCTGTGTTACCGTTCATCCGTCGCATCATCCCCGCCTCGGTG
GCCTGCGAGCTGCTCGACATCTTCCTCACTGACCCGGGCAGCTCGCTGTTCCGGGGAGCCTCACCGTATATTCTC
ACCCGCGTCTTCAGAAAGCGATCCATCACCCATCCCACGAGCCCGAGACCCACGACGCCCGCCCTGCTGGCCACC
ATCCTGTGGTGCGTCGCTCAGACAGCCGATGTTATGCTGCTCCATGTGCCGGGCACCCGCGCGCGTGTCGTCAAC
GACCTATACGACCTGGCCACTGCGCTGATCTCTGATCGAGATCCCGACAGATGGAGACGGATCCACGGCGGCCTG
CGAGCTGAAAGCGAGGTCCCTCATCCCAGCCTTCCGACGCCGACGTCGGTGCCGATGACGACGGCAGCAAATGAG
CCGGCCGGCGTCGTCGACGACGTCCTCACCTTCATTCTGCTGTCCATCGCCGTGTCCGGGAGCGACTTCAAGTCC
GACTGTTACAAGTGGTGGTCCAAGGCGGTTCGGCTGGCGCTCTCGCTGCGACTCAACCGTGAAGACGAACGCTGC
TCAGCACCCGTCTCGCCCTGTGCCAACCCGCTATGCTCGTGTCACCGCGATGCCGCCAACAGAGAAGCATCGCTT
GCCGAAGTCGAGCGGCGCGAGGAGCGCAGGCGCGTCTTTTGGCTGCTCTACAGCCTCGATCGTCACCTCAGCCTA
TCCTTCAACACGGTCCTCTCCATGCCGGACTCGTACTGCGAGGTGTTTGCGCCGCTGCCCGAGACGGTGTGGGAG
AGGCTCGAAGACGTGACGCCCCGAGAAATGCCCCCGAGAGTCCTGGGCCCGCCGATTCTGGCCAGCGGCACGGGC
TTCTTCGAGTACTTTTTGCCCATCATGGCCATCCTCGGCGACATCATCGAGGTCCATCATCGGCGGCGACATCCG
CGGCTGGGTGACCAAGTCGACGACTCGCACGCCGTTTCCGTCATCCAGAAGCTGCTGGCCAGCTACGAGATGAGT
CTCGACTCGCTGACGGTCCCCAGCCGGGACCTTGTGACGGGGCTCTCGACGCCAGTACTGCACCAGGACGGCATC
CGGTTGGCGGCCTACGACGCGGCCGACCATACCAAGGTTCGACTGGTCAAGGCCTACAGCACGCACATGCTGCAC
GTCCTCCACGTGTTGTTGCACGGTAAATGGGACGCCATCTCGATGCTGGACGACGGCGAGGACTGGATCACGTCC
AAGCGCTTTACCGAGTGCGCGACGCACGCCATCTCGGCGTCGCAGTCGGTTTCGACGATCCTGGCCATCGACCCG
GAGCTGACTTTCATGTCGTACCTGTTTGGCATCTATCTGTTGCAGGGCAGCTTTGTTCTGCTTCTCTTTGCCGAC
CGCATGCCGCAACTAGGACCCAACGAATCGGTAGAGCAAGCATGCGAGAACATTATCCGCGCGCACGAGGTCTGC
GTCGTCACGCTGAGCACCGAGTTTCAGGTGAGTTTGCTTGGTCCTCTGAGTGTTGCGTCAGGGGCTGAAGAGAGG
CGTTTATAA
Gene >Ophun1|6225
ATGGCGAATGGTTCGTGACGCTGTCCTCATGCTTGTTCCCGTCTTGTTGGCATTGCTGACTCGAGCCCCCCTTTT
TTGGTTCCCTTGTGGTTCCCATGCAGTCCGTGTCGTCGTTGTCGTGGTATGCTTCTTCCCTCTCTCTTTTCTCCT
CTTATTCTTGCCATTCTCCCCTCGTCTCACCAGTCCTATGATATCCAGAATACGGCTACACATGTCGATATAACC
GTGAGGTCAAGAAAAGGGGTCGTCTGCCCGCCCCAAAGTACGTGCCCCCTTCCCCTATCCTCATCAGCATATCGT
CTCCCGTCAGCTCATCCATCTGCTCAATAGCCGGGAAACTCACCATGCATCACCTCCGGCTACACCACCAGCGTC
CAAGACGGCATCCTCCGTCGCAGCTCTCATCGGCCTCAACAAGCACGACGACGCTCCCCACCGCGGACACCACCA
CCGGGAGGGCGGAGACAATCCGCAACACCAGCTGATGGCGGGCCGCTCTGCCCACGCCATGTCAATCCCCTCGCT
GACCCAGGCCGCCCTTCACCCGTCTCCTCGCCCGCTGCTTTCCGCTGACGGGCCGCTGTCCCGGTCTCGGGCCGC
TTCATCGTCGGCCAGTGCCGCCCCCGACGATATGCTCAACTCGGACGACAGCGCCAGCTATGCTTCTCCCGCCAA
CGCCGCGCCCTCCACCGACCTCGATGGCAGACGGGCCTCATTCCGCTCGGCCGCCAGTCATGATCCGCCACGGGA
GTCCGTCAGCAGGGCCACCTCGGCCCCGGACGGCTCCCTCCTCGACGTGCTGCACCAGGCTCCTTCGGATGAGTG
CTGCTATAGGTTCCTCGATCCTGTGTTACCGTTCATCCGTCGCATCATCCCCGCCTCGGTGGCCTGCGAGCTGCT
CGACATCTTCCTCACTGACCCGGGCAGCTCGCTGTTCCGGGGAGCCTCACCGTATATTCTCACCCGCGTCTTCAG
AAAGCGATCCATCACCCATCCCACGAGCCCGAGACCCACGACGCCCGCCCTGCTGGCCACCATCCTGTGGTGCGT
CGCTCAGACAGCCGATGTTATGCTGCTCCATGTGCCGGGCACCCGCGCGCGTGTCGTCAACGACCTATACGACCT
GGCCACTGCGCTGATCTCTGATCGAGATCCCGACAGATGGAGACGGATCCACGGTTGGGAGGACCCCTTTCTCAG
TTGCTCTCTTTCCCCCTCCCTCTCACTCTTTCTCCGTCCCTCTGCTTCCCTTGACCCGACCACGAAGGCGGCTGA
CCATCTGATGTCTCCCCCCTTTCAGGCGGCCTGCGAGCTGAAAGCGAGGTCCCTCATCCCAGCCTTCCGACGCCG
ACGTCGGTGCCGATGACGACGGCAGCAAATGAGCCGGCCGGCGTCGTCGACGACGTCCTCACCTTCATTCTGCTG
TCCATCGCCGTGTCCGGGAGCGACTTCAAGTCCGACTGTTACAAGTGGTGGTCCAAGGCGGTTCGGCTGGCGCTC
TCGCTGCGACTCAACCGTGAAGACGAACGCTGCTCAGCACCCGTCTCGCCCTGTGCCAACCCGCTATGCTCGTGT
CACCGCGATGCCGCCAACAGAGAAGCATCGCTTGCCGAAGTCGAGCGGCGCGAGGAGCGCAGGCGCGTCTTTTGG
CTGCTCTACAGCCTCGATCGTCACCTCAGCCTATCCTTCAACACGGTCCTCTCCATGCCGGACTCGTACTGCGAG
GTGTTTGGTGAGTGGGAGCGTTTATTGGCCGGCAAGCCGGTCTTCCAGGTCAAGGTCAAGGGGGGAAAAGAAAGG
GGAGCTGACGCTGCCGGCTGCCACAAACAAAAGCGCCGCTGCCCGAGACGGTGTGGGAGAGGCTCGAAGACGTGA
CGCCCCGAGAAATGCCCCCGAGAGTCCTGGGCCCGCCGATTCTGGCCAGCGGCACGGGCTTCTTCGAGTACTTTT
TGCCCATCATGGCCATCCTCGGCGACATCATCGAGGTCCATCATCGGCGGCGACATCCGCGGCTGGGTGACCAAG
TCGACGACTCGCACGCCGTTTCCGTCATCCAGAAGCTGCTGGCCAGCTACGAGATGAGTCTCGACTCGCTGACGG
TCCCCAGCCGGGACCTTGTGACGGGGCTCTCGACGCCAGTACTGCACCAGGACGGCATCCGGTTGGCGGCCTACG
ACGCGGCCGACCATACCAAGGTTCGACTGGTCAAGGCCTACAGCACGCACATGCTGCACGTCCTCCACGTGTTGT
TGCACGGTAAATGGGACGCCATCTCGATGCTGGACGACGGCGAGGACTGGATCACGTCCAAGCGCTTTACCGAGT
GCGCGACGCACGCCATCTCGGCGTCGCAGTCGGTTTCGACGATCCTGGCCATCGACCCGGAGCTGACTTTCATGT
CGTACCTGTTTGGCATCTATCTGTTGCAGGGCAGCTTTGTTCTGCTTCTCTTTGCCGACCGCATGCCGCAACTAG
GACCCAACGAATCGGTAGAGCAAGCATGCGAGAACATTATCCGCGCGCACGAGGTCTGCGTCGTCACGCTGAGCA
CCGAGTTTCAGGTGAGTTTGCTTGGTCCTCTGAGTGTTGCGTCAGGGGCTGAAGAGAGGCGTTTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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