Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|6224
Gene name
LocationContig_667:4206..6076
Strand-
Gene length (bp)1870
Transcript length (bp)1113
Coding sequence length (bp)1113
Protein length (aa) 371

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 2.2E-20 19 356

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P11551|FUCP_ECOLI L-fucose-proton symporter OS=Escherichia coli (strain K12) GN=fucP PE=1 SV=3 8 366 4.0E-46
sp|P0C105|GLUP_BRUAB Glucose/galactose transporter OS=Brucella abortus biovar 1 (strain 9-941) GN=gluP PE=3 SV=1 11 365 1.0E-39
sp|Q2YIJ8|GLUP_BRUA2 Glucose/galactose transporter OS=Brucella abortus (strain 2308) GN=gluP PE=3 SV=1 11 365 1.0E-39
sp|Q8YB48|GLUP_BRUME Glucose/galactose transporter OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=gluP PE=3 SV=1 11 365 4.0E-38
sp|O25788|GLUP_HELPY Putative glucose/galactose transporter OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=gluP PE=3 SV=1 16 365 2.0E-25
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P11551|FUCP_ECOLI L-fucose-proton symporter OS=Escherichia coli (strain K12) GN=fucP PE=1 SV=3 8 366 4.0E-46
sp|P0C105|GLUP_BRUAB Glucose/galactose transporter OS=Brucella abortus biovar 1 (strain 9-941) GN=gluP PE=3 SV=1 11 365 1.0E-39
sp|Q2YIJ8|GLUP_BRUA2 Glucose/galactose transporter OS=Brucella abortus (strain 2308) GN=gluP PE=3 SV=1 11 365 1.0E-39
sp|Q8YB48|GLUP_BRUME Glucose/galactose transporter OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=gluP PE=3 SV=1 11 365 4.0E-38
sp|O25788|GLUP_HELPY Putative glucose/galactose transporter OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=gluP PE=3 SV=1 16 365 2.0E-25
sp|P44776|FUCP_HAEIN L-fucose permease OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=fucP PE=3 SV=1 2 364 5.0E-25
sp|Q9ZK41|GLUP_HELPJ Putative glucose/galactose transporter OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=gluP PE=3 SV=1 16 365 2.0E-23
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0009987 cellular process No
GO:0006810 transport No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 49 71 22
3 78 98 20
4 102 120 18
5 141 163 22
6 178 195 17
7 240 262 22
8 277 299 22
9 306 325 19
10 330 352 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|6224
MAHACAPKWLFPVCLVTSLFFLWGFSYGLLDTLNKHFQDTLGIGKSRSAGLQAAYFGAYPLASLGHAAWVLQRFG
YRATFVWGLCLFGLGAVLAIPAIKGRSFGGFCACIFVIGSGLGSLETAANPFMGVCGPARQSEIRLNVAQAFSGV
GSVIAPVVGSFAFFRLDAEGALRNVQWIYLAVALLVFVLAAVFFVSDIPEPQEEDGKLLREKDREAEEGRDQGDD
DDPSRGLTWSQRWRLFHAALAQFCCTGAQIAIAGYFINYVIEARPQTRPATASQLLAGAQGAFALGRFVGALLMR
WIRPRVVLFAFTTLSTVLVIPSIWVRGNAAPAVICLAMFFESVCFPTIVALGIRGLGRHSRRGSGYGDQK*
Coding >Ophun1|6224
ATGGCTCATGCTTGCGCGCCAAAGTGGTTGTTCCCCGTCTGCCTCGTCACCAGCCTCTTCTTCCTCTGGGGCTTC
TCGTACGGGCTGCTGGACACGCTCAACAAGCATTTCCAGGACACGCTGGGCATCGGCAAATCGCGATCTGCCGGC
CTGCAAGCCGCGTACTTTGGAGCCTACCCCCTGGCCTCGCTAGGCCACGCGGCCTGGGTCCTGCAGCGGTTCGGA
TACCGCGCCACCTTTGTCTGGGGCCTCTGCCTGTTTGGCCTTGGAGCCGTCTTGGCCATTCCAGCCATCAAGGGT
CGCAGCTTTGGCGGCTTTTGCGCTTGTATCTTCGTCATCGGCAGCGGGCTCGGCTCTCTCGAGACGGCGGCGAAC
CCTTTCATGGGCGTCTGCGGACCCGCGCGACAGTCCGAGATACGGCTCAACGTGGCGCAGGCCTTTAGCGGCGTC
GGATCCGTCATCGCCCCCGTCGTAGGCTCCTTTGCCTTCTTCCGTCTCGACGCTGAGGGCGCGCTGCGCAACGTC
CAGTGGATCTACCTCGCTGTCGCATTGCTCGTCTTCGTCCTGGCCGCCGTCTTCTTCGTCTCTGATATTCCAGAA
CCACAGGAGGAGGATGGCAAGCTGCTGCGAGAGAAGGATAGGGAGGCGGAGGAGGGGAGGGATCAGGGTGATGAT
GATGATCCGAGTCGAGGCCTGACTTGGTCTCAGCGGTGGCGTCTTTTCCATGCTGCTTTGGCGCAGTTTTGCTGT
ACGGGCGCACAGATTGCTATTGCTGGATACTTCATCAACTACGTGATAGAGGCCCGGCCCCAGACCCGACCCGCG
ACGGCATCACAGCTCCTGGCCGGTGCGCAGGGGGCTTTCGCTCTGGGCCGTTTCGTCGGCGCGCTGCTGATGCGC
TGGATCCGACCACGCGTCGTCCTCTTCGCCTTTACGACGCTGAGCACCGTGCTGGTGATACCCTCCATCTGGGTA
CGAGGCAACGCCGCTCCGGCCGTCATCTGCCTAGCCATGTTCTTCGAGTCGGTCTGCTTCCCGACCATCGTGGCG
CTGGGGATCCGCGGCCTGGGGAGGCATAGCCGGAGGGGGTCTGGCTACGGGGACCAGAAATAG
Transcript >Ophun1|6224
ATGGCTCATGCTTGCGCGCCAAAGTGGTTGTTCCCCGTCTGCCTCGTCACCAGCCTCTTCTTCCTCTGGGGCTTC
TCGTACGGGCTGCTGGACACGCTCAACAAGCATTTCCAGGACACGCTGGGCATCGGCAAATCGCGATCTGCCGGC
CTGCAAGCCGCGTACTTTGGAGCCTACCCCCTGGCCTCGCTAGGCCACGCGGCCTGGGTCCTGCAGCGGTTCGGA
TACCGCGCCACCTTTGTCTGGGGCCTCTGCCTGTTTGGCCTTGGAGCCGTCTTGGCCATTCCAGCCATCAAGGGT
CGCAGCTTTGGCGGCTTTTGCGCTTGTATCTTCGTCATCGGCAGCGGGCTCGGCTCTCTCGAGACGGCGGCGAAC
CCTTTCATGGGCGTCTGCGGACCCGCGCGACAGTCCGAGATACGGCTCAACGTGGCGCAGGCCTTTAGCGGCGTC
GGATCCGTCATCGCCCCCGTCGTAGGCTCCTTTGCCTTCTTCCGTCTCGACGCTGAGGGCGCGCTGCGCAACGTC
CAGTGGATCTACCTCGCTGTCGCATTGCTCGTCTTCGTCCTGGCCGCCGTCTTCTTCGTCTCTGATATTCCAGAA
CCACAGGAGGAGGATGGCAAGCTGCTGCGAGAGAAGGATAGGGAGGCGGAGGAGGGGAGGGATCAGGGTGATGAT
GATGATCCGAGTCGAGGCCTGACTTGGTCTCAGCGGTGGCGTCTTTTCCATGCTGCTTTGGCGCAGTTTTGCTGT
ACGGGCGCACAGATTGCTATTGCTGGATACTTCATCAACTACGTGATAGAGGCCCGGCCCCAGACCCGACCCGCG
ACGGCATCACAGCTCCTGGCCGGTGCGCAGGGGGCTTTCGCTCTGGGCCGTTTCGTCGGCGCGCTGCTGATGCGC
TGGATCCGACCACGCGTCGTCCTCTTCGCCTTTACGACGCTGAGCACCGTGCTGGTGATACCCTCCATCTGGGTA
CGAGGCAACGCCGCTCCGGCCGTCATCTGCCTAGCCATGTTCTTCGAGTCGGTCTGCTTCCCGACCATCGTGGCG
CTGGGGATCCGCGGCCTGGGGAGGCATAGCCGGAGGGGGTCTGGCTACGGGGACCAGAAATAG
Gene >Ophun1|6224
ATGGCTCATGCTTGCGCGCCAAAGTGGTTGTTCCCCGTCTGCCTCGTCACCAGCCTCTTCTTCCTCTGGGGCTTC
TCGTACGGGCTGCTGGACACGCTCAACAAGCATTTCCAGGACACGCTGGGCATCGGCAAATCGCGATCTGCCGGC
CTGCAAGCCGCGTACTTTGGGTGCGTCCTGCTCGATATATATAGCCCCGTTACATGCCATTGTCCGGATCCTGAT
GGGCCACGTCAAGAGCCTACCCCCTGGCCTCGCTAGGCCACGCGGCCTGGGTCCTGCAGCGGTTCGGATACCGCG
CCACCTTTGTCTGGGGCCTCTGCCTGTTTGGTATGCTTTTCTGCCTTGTTGTCCCCCTTTGCCGCTGTCTTGGCT
CACGCGATGACCGACCCGCTCCAAGGCCTTGGAGCCGTCTTGGCCATTCCAGCCATCAAGGGTCGCAGCTTTGGC
GGCTTTTGCGCTTGTATCTTCGTCATCGGCAGCGGGCTCGGCTCTCTCGAGACGGCGGCGAACCCTTTCATGGGC
GGTATGCGTTGCCCCTGACCATGATCGTGACGGGCAGTCAAGGCTGAACTGGGCCAGTCTGCGGACCCGCGCGAC
AGTCCGAGATACGGCTCAACGTGGCGCAGGCCTTTAGCGGCGTCGGATCCGTCATCGCCCCCGTCGTAGGCTCCT
TTGCCTTCTTCCGTCTCGACGCTGAGGGCGCGCTGCGCAACGTCCAGTGGATCTACCTCGCTGTCGCATTGCTCG
TCTTCGTCCTGGCCGCCGTCTTCTTCGTCTCTGATATTCCAGAACCACAGGAGGAGGATGGCAAGCTGCTGCGAG
AGAAGGATAGGGAGGCGGAGGAGGGGAGGGATCAGGGTGATGATGATGATCCGAGTCGAGGCCTGACTTGGTCTC
AGCGGTGGCGTCTTTTCCATGCTGCTTTGGCGCAGTTTTGCTGTACGGGCGCACAGATTGCTATTGCTGGGTAAG
AAGACGACGTGCCGATATATCGTCATGACTGACGGACGAGCATCACAGATACTTCATCAACTACGTGATAGAGGC
CCGGCCCCAGACCCGACCCGCGACGGCATCACAGCTCCTGGCCGGTGCGCAGGGGGCTTTCGCTCTGGGCCGTTT
CGTCGGCGCGCTGCTGATGCGCTGGATCCGACCACGCGTCGTCCTCTTCGCCTTTACGACGCTGAGCACCGTGCT
GGTGATACCCTCCATCTGGGTACGAGGCAACGCCGCTCCGGCCGTCATCTGCCTAGCCATGTTCTTCGAGTCGGT
CTGCTTCCCGACCATCGTGGCGCTGGGGATCCGCGGCCTGGGGAGGCATAGCCGGAGGGGGTCTGGGTATGTGGT
TGGGGGGATCGTGGGTGGTGCGTGCGTGCCGCCGCTTATGGGGGCCGTTGCGGATGGTAGGGGGACGGCGGTAGG
GATGGCGGTGCCTTTTGCGTTTTTGGTGGCTGGATGGACGTATGCTGTTGCTGTGAATGTTGTGCCTGGGTATAG
GGCTGTTGTGGATGGGGAGATTGGAGGGGAGGTTGAGGGAGAGGCTGTTGAGGCGAGGAGGAAGGGGGGCGTGTT
GGAGACGGGGAGGCGTTGGTATCGGTGGTGACGGTTGGGATGGGATGTTGCGATGCTTATCCGTCTTGTCAGGGG
TATCGTGATGCTATGTTACTTGTCTTGATTGTTGTCAGGAGGTGTTGTGATGCTACATGTAATCCGCAAGGTAGG
AGGCTTAACCAAATATATCCACATGTTTACTCCAAATTGGAACATGACACATGTTCAAAATGAGAGTCATGTCTA
TTTCTAGAACGAGACAGGGCTGTAGTCGCTGGCCGCCTTGCTTTGATGCAGCTACGGGGACCAGAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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