Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|62
Gene name
LocationContig_10:10683..11792
Strand-
Gene length (bp)1109
Transcript length (bp)1065
Coding sequence length (bp)1065
Protein length (aa) 355

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00348 polyprenyl_synt Polyprenyl synthetase 1.6E-73 48 306

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q92235|FPPS_GIBFU Farnesyl pyrophosphate synthase OS=Gibberella fujikuroi GN=FPPS PE=3 SV=1 5 354 4.0E-145
sp|Q92250|FPPS_NEUCR Farnesyl pyrophosphate synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fpp PE=3 SV=2 5 354 3.0E-142
sp|O14230|FPPS_SCHPO Farnesyl pyrophosphate synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fps1 PE=1 SV=1 6 354 4.0E-109
sp|P08524|FPPS_YEAST Farnesyl pyrophosphate synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG20 PE=1 SV=2 4 354 1.0E-105
sp|P49349|FPPS_KLULA Farnesyl pyrophosphate synthase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=FPS1 PE=3 SV=1 5 354 6.0E-100
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Swissprot ID Swissprot Description Start End E-value
sp|Q92235|FPPS_GIBFU Farnesyl pyrophosphate synthase OS=Gibberella fujikuroi GN=FPPS PE=3 SV=1 5 354 4.0E-145
sp|Q92250|FPPS_NEUCR Farnesyl pyrophosphate synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fpp PE=3 SV=2 5 354 3.0E-142
sp|O14230|FPPS_SCHPO Farnesyl pyrophosphate synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fps1 PE=1 SV=1 6 354 4.0E-109
sp|P08524|FPPS_YEAST Farnesyl pyrophosphate synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG20 PE=1 SV=2 4 354 1.0E-105
sp|P49349|FPPS_KLULA Farnesyl pyrophosphate synthase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=FPS1 PE=3 SV=1 5 354 6.0E-100
sp|P08836|FPPS_CHICK Farnesyl pyrophosphate synthase OS=Gallus gallus GN=FDPS PE=1 SV=2 6 354 2.0E-85
sp|Q920E5|FPPS_MOUSE Farnesyl pyrophosphate synthase OS=Mus musculus GN=Fdps PE=1 SV=1 50 354 1.0E-81
sp|P05369|FPPS_RAT Farnesyl pyrophosphate synthase OS=Rattus norvegicus GN=Fdps PE=2 SV=2 50 354 6.0E-81
sp|Q8WMY2|FPPS_BOVIN Farnesyl pyrophosphate synthase OS=Bos taurus GN=FDPS PE=1 SV=1 50 354 6.0E-81
sp|P14324|FPPS_HUMAN Farnesyl pyrophosphate synthase OS=Homo sapiens GN=FDPS PE=1 SV=4 50 354 1.0E-77
sp|P49352|FPPS2_LUPAL Farnesyl pyrophosphate synthase 2 OS=Lupinus albus GN=FPS2 PE=2 SV=1 50 354 2.0E-75
sp|O24241|FPPS1_PARAR Farnesyl pyrophosphate synthase 1 OS=Parthenium argentatum GN=FPS1 PE=2 SV=1 48 354 2.0E-74
sp|P49351|FPPS1_LUPAL Farnesyl pyrophosphate synthase 1 OS=Lupinus albus GN=FPS1 PE=2 SV=1 6 354 3.0E-74
sp|O24242|FPPS2_PARAR Farnesyl pyrophosphate synthase 2 OS=Parthenium argentatum GN=FPS2 PE=2 SV=1 48 354 7.0E-73
sp|Q9NH03|FPS_DICDI Farnesyl diphosphate synthase OS=Dictyostelium discoideum GN=fps PE=2 SV=1 48 352 3.0E-72
sp|Q7XYS9|FPPS1_ARTSI Farnesyl diphosphate synthase 1 OS=Artemisia spiciformis GN=FDS-1 PE=1 SV=1 48 354 7.0E-72
sp|O59703|GGPPS_SCHPO Geranylgeranyl pyrophosphate synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spo9 PE=1 SV=1 49 354 8.0E-72
sp|P49353|FPPS_MAIZE Farnesyl pyrophosphate synthase OS=Zea mays GN=FPS PE=2 SV=1 50 354 8.0E-72
sp|Q43315|FPPS2_ARATH Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana GN=FPS2 PE=2 SV=1 50 354 2.0E-71
sp|P49350|FPPS_ARTAN Farnesyl pyrophosphate synthase OS=Artemisia annua GN=FPS1 PE=2 SV=1 48 354 3.0E-71
sp|Q7XYT0|FPPS2_ARTSI Farnesyl diphosphate synthase 2 OS=Artemisia spiciformis GN=FDS-2 PE=1 SV=1 1 354 5.0E-71
sp|Q09152|FPPS1_ARATH Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis thaliana GN=FPS1 PE=2 SV=2 50 354 2.0E-70
sp|O64905|FPPS_HELAN Farnesyl pyrophosphate synthase OS=Helianthus annuus GN=FPS1 PE=2 SV=1 48 354 3.0E-70
sp|Q54XP1|Y8823_DICDI Probable farnesyl diphosphate synthase DDB_G0278823 OS=Dictyostelium discoideum GN=DDB_G0278823 PE=3 SV=1 50 354 1.0E-68
sp|P0C565|CPPAS_TANCI Chrysanthemyl diphosphate synthase, chloroplastic OS=Tanacetum cinerariifolium PE=1 SV=1 8 354 3.0E-61
sp|Q7XYS8|CHRDS_ARTSI Monoterpene synthase FDS-5, chloroplastic OS=Artemisia spiciformis GN=FDS-5 PE=1 SV=1 50 325 3.0E-56
sp|Q55EU7|Y8742_DICDI Probable farnesyl diphosphate synthase DDB_G0268742 OS=Dictyostelium discoideum GN=DDB_G0268742 PE=3 SV=1 6 331 1.0E-46
sp|O26156|IDSA_METTH Short chain isoprenyl diphosphate synthase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=idsA PE=3 SV=1 57 294 4.0E-11
sp|Q58270|IDSA_METJA Short chain isoprenyl diphosphate synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=idsA PE=3 SV=1 77 297 7.0E-11
sp|Q53479|IDSA_METTM Short chain isoprenyl diphosphate synthase OS=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) GN=idsA PE=1 SV=3 57 294 8.0E-10
sp|P95999|GGPS_SULSO Geranylgeranyl diphosphate synthase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=gds PE=3 SV=2 57 297 3.0E-09
sp|P39464|GGPS_SULAC Geranylgeranyl diphosphate synthase OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=gds PE=1 SV=1 89 331 7.0E-09
sp|Q9UWR6|GFPS_AERPX Geranylfarnesyl diphosphate synthase OS=Aeropyrum pernix GN=fgs PE=1 SV=1 88 354 1.0E-08
sp|P0AD58|ISPB_SHIFL Octaprenyl-diphosphate synthase OS=Shigella flexneri GN=ispB PE=3 SV=1 85 324 1.0E-07
sp|P0AD57|ISPB_ECOLI Octaprenyl-diphosphate synthase OS=Escherichia coli (strain K12) GN=ispB PE=1 SV=1 85 324 1.0E-07
sp|Q12051|GGPPS_YEAST Geranylgeranyl pyrophosphate synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BTS1 PE=1 SV=1 84 280 5.0E-07
sp|B2DBE9|GGS4_PHOAM Geranylgeranyl pyrophosphate synthase D OS=Phomopsis amygdali GN=GGS-D PE=1 SV=1 92 334 1.0E-06
sp|P24322|GGPPS_NEUCR Geranylgeranyl pyrophosphate synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=al-3 PE=2 SV=2 92 341 2.0E-06
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GO

GO Term Description Terminal node
GO:0008299 isoprenoid biosynthetic process Yes
GO:0006720 isoprenoid metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0008152 metabolic process No
GO:0009058 biosynthetic process No
GO:0009987 cellular process No
GO:0071704 organic substance metabolic process No
GO:0006629 lipid metabolic process No
GO:0044255 cellular lipid metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:0008610 lipid biosynthetic process No
GO:0044237 cellular metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

Gene cluster ID Type of secondary metabolism gene
Cluster 1 (None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup239
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4149
Ophiocordyceps australis 1348a (Ghana) OphauG2|655
Ophiocordyceps australis map64 (Brazil) OphauB2|2710
Ophiocordyceps australis map64 (Brazil) OphauB2|7768
Ophiocordyceps camponoti-floridani Ophcf2|05882
Ophiocordyceps camponoti-floridani Ophcf2|06461
Ophiocordyceps camponoti-floridani Ophcf2|07454
Ophiocordyceps camponoti-rufipedis Ophun1|4168
Ophiocordyceps camponoti-rufipedis Ophun1|62 (this protein)
Ophiocordyceps kimflemingae Ophio5|450
Ophiocordyceps kimflemingae Ophio5|4634
Ophiocordyceps subramaniannii Hirsu2|6058

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|62
MTLLTRPRFEAVFPRLVSAVLDHARSFKLDQSELDRFKQSLTSSPHTKNIEFNCLDGKFNRALSVLEAVSLLQGK
PLDDSQFTQVAALGWALELLHISMLMFDDVMDKGINRRGKPCWYRVQGVGLNAINDSMMLQSSAFFLLKDIFRSH
PLYTEILEALLEAQFKTEMGQHIDLLTAPQDQTNLDKFTADKYTLIAVTKTAYSFFLPVALALYYLELATPNNIK
QTEEIVPLLTEYFQIQDDYLDNFGRPETIGKIGNDIRENKCSWLVVQALEIATPKQRRVLEENYGRDDDVKERAV
KKLYDELALEQRYQEFEEQRVKEIRDMINRVDESEGLKKGVFSAMLSQIYKRSK*
Coding >Ophun1|62
ATGACTTTGCTCACTCGACCGAGGTTCGAGGCCGTCTTTCCCCGGCTCGTGTCGGCTGTTCTTGACCACGCAAGG
TCGTTCAAACTCGATCAGTCAGAGTTGGACAGGTTCAAGCAAAGTCTCACCTCGAGTCCCCACACCAAGAACATC
GAGTTCAACTGCCTCGATGGCAAGTTCAACAGGGCGCTCTCTGTCCTAGAGGCAGTGTCCCTGCTTCAGGGGAAG
CCCCTGGATGATTCACAGTTTACCCAAGTCGCTGCCCTCGGATGGGCCCTAGAGCTCCTCCACATCTCTATGCTC
ATGTTCGACGACGTAATGGACAAGGGCATAAACCGTCGCGGCAAGCCCTGCTGGTACCGCGTTCAGGGCGTTGGC
TTGAATGCCATCAACGATTCCATGATGCTACAGTCGTCCGCCTTCTTCCTCTTGAAAGACATCTTTCGGTCTCAC
CCTCTGTATACGGAAATCTTGGAGGCATTGCTAGAAGCGCAGTTCAAGACAGAGATGGGCCAGCATATTGATCTA
CTTACTGCTCCCCAAGACCAGACGAATCTCGACAAGTTCACCGCTGACAAGTACACCCTGATCGCCGTCACGAAG
ACGGCATACTCTTTCTTCCTCCCGGTTGCTTTGGCTCTGTATTACCTGGAACTTGCAACGCCCAACAATATTAAG
CAGACGGAAGAGATTGTGCCATTACTCACCGAGTATTTCCAAATTCAAGACGACTATCTCGACAACTTTGGCCGG
CCCGAGACTATCGGCAAGATCGGGAACGACATTCGGGAGAATAAGTGTTCCTGGCTCGTTGTGCAGGCTCTAGAG
ATAGCCACACCGAAGCAGCGCAGAGTCCTTGAAGAGAATTACGGCCGGGACGACGACGTAAAAGAGAGGGCGGTC
AAGAAGCTTTACGACGAGCTGGCGCTGGAGCAGCGGTACCAGGAGTTTGAAGAGCAGCGGGTCAAGGAGATTCGG
GACATGATTAACAGGGTCGACGAGAGCGAGGGACTCAAGAAGGGCGTCTTTTCAGCCATGCTTTCTCAGATCTAC
AAGCGTAGCAAATGA
Transcript >Ophun1|62
ATGACTTTGCTCACTCGACCGAGGTTCGAGGCCGTCTTTCCCCGGCTCGTGTCGGCTGTTCTTGACCACGCAAGG
TCGTTCAAACTCGATCAGTCAGAGTTGGACAGGTTCAAGCAAAGTCTCACCTCGAGTCCCCACACCAAGAACATC
GAGTTCAACTGCCTCGATGGCAAGTTCAACAGGGCGCTCTCTGTCCTAGAGGCAGTGTCCCTGCTTCAGGGGAAG
CCCCTGGATGATTCACAGTTTACCCAAGTCGCTGCCCTCGGATGGGCCCTAGAGCTCCTCCACATCTCTATGCTC
ATGTTCGACGACGTAATGGACAAGGGCATAAACCGTCGCGGCAAGCCCTGCTGGTACCGCGTTCAGGGCGTTGGC
TTGAATGCCATCAACGATTCCATGATGCTACAGTCGTCCGCCTTCTTCCTCTTGAAAGACATCTTTCGGTCTCAC
CCTCTGTATACGGAAATCTTGGAGGCATTGCTAGAAGCGCAGTTCAAGACAGAGATGGGCCAGCATATTGATCTA
CTTACTGCTCCCCAAGACCAGACGAATCTCGACAAGTTCACCGCTGACAAGTACACCCTGATCGCCGTCACGAAG
ACGGCATACTCTTTCTTCCTCCCGGTTGCTTTGGCTCTGTATTACCTGGAACTTGCAACGCCCAACAATATTAAG
CAGACGGAAGAGATTGTGCCATTACTCACCGAGTATTTCCAAATTCAAGACGACTATCTCGACAACTTTGGCCGG
CCCGAGACTATCGGCAAGATCGGGAACGACATTCGGGAGAATAAGTGTTCCTGGCTCGTTGTGCAGGCTCTAGAG
ATAGCCACACCGAAGCAGCGCAGAGTCCTTGAAGAGAATTACGGCCGGGACGACGACGTAAAAGAGAGGGCGGTC
AAGAAGCTTTACGACGAGCTGGCGCTGGAGCAGCGGTACCAGGAGTTTGAAGAGCAGCGGGTCAAGGAGATTCGG
GACATGATTAACAGGGTCGACGAGAGCGAGGGACTCAAGAAGGGCGTCTTTTCAGCCATGCTTTCTCAGATCTAC
AAGCGTAGCAAATGA
Gene >Ophun1|62
ATGACTTTGCTCACTCGACCGAGGTTCGAGGCCGTCTTTCCCCGGCTCGTGTCGGCTGTTCTTGACCACGCAAGG
TCGTTCAAACTCGATCAGTCAGAGTTGGACAGGTTCAAGCAAGTCAGTTCAATTCATTCTTTGATCCCAAGACGC
ATATCTATCAGAGTCTCACCTCGAGTCCCCACACCAAGAACATCGAGTTCAACTGCCTCGATGGCAAGTTCAACA
GGGCGCTCTCTGTCCTAGAGGCAGTGTCCCTGCTTCAGGGGAAGCCCCTGGATGATTCACAGTTTACCCAAGTCG
CTGCCCTCGGATGGGCCCTAGAGCTCCTCCACATCTCTATGCTCATGTTCGACGACGTAATGGACAAGGGCATAA
ACCGTCGCGGCAAGCCCTGCTGGTACCGCGTTCAGGGCGTTGGCTTGAATGCCATCAACGATTCCATGATGCTAC
AGTCGTCCGCCTTCTTCCTCTTGAAAGACATCTTTCGGTCTCACCCTCTGTATACGGAAATCTTGGAGGCATTGC
TAGAAGCGCAGTTCAAGACAGAGATGGGCCAGCATATTGATCTACTTACTGCTCCCCAAGACCAGACGAATCTCG
ACAAGTTCACCGCTGACAAGTACACCCTGATCGCCGTCACGAAGACGGCATACTCTTTCTTCCTCCCGGTTGCTT
TGGCTCTGTATTACCTGGAACTTGCAACGCCCAACAATATTAAGCAGACGGAAGAGATTGTGCCATTACTCACCG
AGTATTTCCAAATTCAAGACGACTATCTCGACAACTTTGGCCGGCCCGAGACTATCGGCAAGATCGGGAACGACA
TTCGGGAGAATAAGTGTTCCTGGCTCGTTGTGCAGGCTCTAGAGATAGCCACACCGAAGCAGCGCAGAGTCCTTG
AAGAGAATTACGGCCGGGACGACGACGTAAAAGAGAGGGCGGTCAAGAAGCTTTACGACGAGCTGGCGCTGGAGC
AGCGGTACCAGGAGTTTGAAGAGCAGCGGGTCAAGGAGATTCGGGACATGATTAACAGGGTCGACGAGAGCGAGG
GACTCAAGAAGGGCGTCTTTTCAGCCATGCTTTCTCAGATCTACAAGCGTAGCAAATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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