© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|6157 |
| Gene name | |
| Location | Contig_652:4189..5717 |
| Strand | - |
| Gene length (bp) | 1528 |
| Transcript length (bp) | 1344 |
| Coding sequence length (bp) | 1344 |
| Protein length (aa) | 448 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12767 | SAGA-Tad1 | Transcriptional regulator of RNA polII, SAGA, subunit | 4.0E-58 | 44 | 279 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12060|HFI1_YEAST | Transcriptional coactivator HFI1/ADA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HFI1 PE=1 SV=1 | 46 | 273 | 1.0E-11 |
| sp|O94301|HFI1_SCHPO | Transcriptional coactivator hfi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hfi1 PE=3 SV=1 | 49 | 283 | 8.0E-10 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0070461 | SAGA-type complex | Yes |
| GO:1990234 | transferase complex | No |
| GO:0000123 | histone acetyltransferase complex | No |
| GO:0031248 | protein acetyltransferase complex | No |
| GO:1902494 | catalytic complex | No |
| GO:0005575 | cellular_component | No |
| GO:0140513 | nuclear protein-containing complex | No |
| GO:1902493 | acetyltransferase complex | No |
| GO:0140535 | intracellular protein-containing complex | No |
| GO:0032991 | protein-containing complex | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|6157 MPDIDPAALSRPVVTLSTPILSHKTLSISSAGTIRPVKASQIIPARIDLEPVYGPLKAAIGAEQWLIYKETTAEF LTGRLSQAEFSDRMDPLLGGDNGEKDHLHNLLVAALLGNVTREMPDQGIAPWVSANDKPVAPVASKPVTGDAAER RLKGDVMQLPARDRRRIKDLAQMDFDPHDALANAFIDSHRKPTSIPEPSSSAVGSINKMNFDLEIRKRFAQPLAV ESGEFPDVGLVTARMLPMCYEAGLVGGHAADAPQLMGVATETFIKEILTQLFSRTRSNGPGDSGSAGPGIGTTWI QTRKYQRQLRIEEEAAQRGELSRDKNGLLPVEAKAAADRPQLGMADLRLSLELADSGMAQFPALRTQVLLGYRDG ELENWDDYTYIGGKRPEPVDSGGMARQEQSGALNGHAEAMDIDAGDGWWEGAERQDVDMLDGILDSCLAVGS* |
| Coding | >Ophun1|6157 ATGCCCGACATCGATCCAGCGGCCTTGAGCCGCCCTGTCGTCACCCTGTCGACACCCATCCTCTCCCACAAGACG CTCTCCATCAGCTCGGCCGGAACTATCAGGCCGGTCAAGGCGAGCCAGATAATACCCGCCCGTATCGACCTCGAG CCTGTCTACGGGCCCCTCAAAGCAGCCATCGGCGCCGAGCAATGGCTGATATACAAGGAGACCACGGCAGAATTT CTTACCGGGCGTCTGAGCCAGGCTGAATTCTCGGACCGCATGGATCCGCTCCTCGGCGGCGATAATGGCGAAAAA GACCATCTCCATAATCTTCTCGTCGCTGCCCTGCTGGGAAACGTGACGCGAGAAATGCCCGATCAAGGGATCGCG CCCTGGGTCAGCGCAAATGATAAGCCCGTGGCACCCGTGGCAAGCAAACCCGTTACCGGTGACGCGGCAGAGCGC AGGCTCAAGGGTGACGTGATGCAATTGCCGGCCAGGGATCGGAGGCGCATAAAGGATCTGGCACAGATGGACTTT GATCCCCATGACGCGCTGGCAAACGCATTCATAGACTCGCACCGGAAGCCGACCAGCATTCCGGAGCCCTCGTCG AGTGCAGTTGGCAGCATCAATAAGATGAATTTTGACCTGGAGATACGGAAGCGATTCGCCCAGCCGCTGGCTGTC GAGTCTGGGGAGTTTCCGGACGTCGGGCTCGTCACAGCTCGGATGCTACCCATGTGCTACGAGGCTGGGCTGGTG GGCGGTCATGCCGCCGACGCGCCGCAGCTCATGGGTGTCGCGACGGAGACGTTTATCAAGGAGATATTGACGCAA CTTTTCAGCCGTACGCGGAGCAATGGACCGGGAGACTCGGGGAGCGCGGGCCCGGGAATCGGCACGACCTGGATC CAGACGCGCAAGTATCAACGACAGCTCCGGATAGAGGAGGAGGCGGCGCAGCGGGGCGAGTTGTCGCGAGACAAA AATGGGCTACTTCCCGTCGAGGCCAAGGCGGCCGCGGATCGGCCACAGCTGGGCATGGCCGACCTGCGGCTATCG CTCGAGCTGGCGGACTCGGGCATGGCGCAGTTTCCTGCCCTCCGGACGCAGGTGTTGCTCGGATACCGCGACGGC GAACTGGAGAACTGGGACGACTACACGTACATTGGCGGCAAACGACCCGAACCCGTCGATTCTGGTGGCATGGCA AGACAGGAGCAATCAGGAGCGCTTAACGGGCACGCCGAAGCCATGGACATTGACGCCGGCGACGGTTGGTGGGAA GGGGCGGAGAGGCAAGACGTGGACATGCTGGACGGCATCCTGGACTCATGCCTGGCGGTAGGGTCCTAG |
| Transcript | >Ophun1|6157 ATGCCCGACATCGATCCAGCGGCCTTGAGCCGCCCTGTCGTCACCCTGTCGACACCCATCCTCTCCCACAAGACG CTCTCCATCAGCTCGGCCGGAACTATCAGGCCGGTCAAGGCGAGCCAGATAATACCCGCCCGTATCGACCTCGAG CCTGTCTACGGGCCCCTCAAAGCAGCCATCGGCGCCGAGCAATGGCTGATATACAAGGAGACCACGGCAGAATTT CTTACCGGGCGTCTGAGCCAGGCTGAATTCTCGGACCGCATGGATCCGCTCCTCGGCGGCGATAATGGCGAAAAA GACCATCTCCATAATCTTCTCGTCGCTGCCCTGCTGGGAAACGTGACGCGAGAAATGCCCGATCAAGGGATCGCG CCCTGGGTCAGCGCAAATGATAAGCCCGTGGCACCCGTGGCAAGCAAACCCGTTACCGGTGACGCGGCAGAGCGC AGGCTCAAGGGTGACGTGATGCAATTGCCGGCCAGGGATCGGAGGCGCATAAAGGATCTGGCACAGATGGACTTT GATCCCCATGACGCGCTGGCAAACGCATTCATAGACTCGCACCGGAAGCCGACCAGCATTCCGGAGCCCTCGTCG AGTGCAGTTGGCAGCATCAATAAGATGAATTTTGACCTGGAGATACGGAAGCGATTCGCCCAGCCGCTGGCTGTC GAGTCTGGGGAGTTTCCGGACGTCGGGCTCGTCACAGCTCGGATGCTACCCATGTGCTACGAGGCTGGGCTGGTG GGCGGTCATGCCGCCGACGCGCCGCAGCTCATGGGTGTCGCGACGGAGACGTTTATCAAGGAGATATTGACGCAA CTTTTCAGCCGTACGCGGAGCAATGGACCGGGAGACTCGGGGAGCGCGGGCCCGGGAATCGGCACGACCTGGATC CAGACGCGCAAGTATCAACGACAGCTCCGGATAGAGGAGGAGGCGGCGCAGCGGGGCGAGTTGTCGCGAGACAAA AATGGGCTACTTCCCGTCGAGGCCAAGGCGGCCGCGGATCGGCCACAGCTGGGCATGGCCGACCTGCGGCTATCG CTCGAGCTGGCGGACTCGGGCATGGCGCAGTTTCCTGCCCTCCGGACGCAGGTGTTGCTCGGATACCGCGACGGC GAACTGGAGAACTGGGACGACTACACGTACATTGGCGGCAAACGACCCGAACCCGTCGATTCTGGTGGCATGGCA AGACAGGAGCAATCAGGAGCGCTTAACGGGCACGCCGAAGCCATGGACATTGACGCCGGCGACGGTTGGTGGGAA GGGGCGGAGAGGCAAGACGTGGACATGCTGGACGGCATCCTGGACTCATGCCTGGCGGTAGGGTCCTAG |
| Gene | >Ophun1|6157 ATGCCCGACATCGATCCAGCGGCCTTGAGCCGCCCTGTCGTCACCCTGTCGACACCCATCCTCTCCCACAAGACG CTCTCCATCAGCTCGGCCGGAACTATCAGGCCGGTCAAGGCGAGCCAGATAATACCCGCCCGTATCGACCTCGAG CCTGTCTACGGGCCCCTCAAAGCAGCCATCGGCGCCGAGCAATGGCTGATATACAAGGAGACCACGGCAGAATTT CTTACCGGTAGGCTCCTCGTGTGTCTCTTCTGGGTAATGCGATGGCTGACGGTGGTACGTTGCGCCAGGGCGTCT GAGCCAGGCTGAATTCTCGGACCGCATGGATCCGCTCCTCGGCGGCGATAATGGCGAAAAAGACCATCTCCATAA TCTTCTCGTCGCTGCCCTGCTGGGAAACGTGACGCGAGAAATGCCCGATCAAGGGATCGCGCCCTGGGTCAGCGC AAATGATAAGCCCGTGGCACCCGTGGCAAGCAAACCCGTTACCGGTGACGCGGCAGAGCGCAGGCTCAAGGGTGA CGTGATGCAATTGCCGGCCAGGGATCGGAGGCGCATAAAGGATCTGGCACAGATGGACGTAAGTCGTCTTCCTAC TGACAGACGTGCAAAGCTTCCGCCCCATGCTGACCAGTCTTGCCAGTTTGATCCCCATGACGCGCTGGCAAACGC ATTCATAGACTCGCACCGGAAGCCGACCAGCATTCCGGAGCCCTCGTCGAGTGCAGTTGGCAGCATCAATAAGAT GAGTGCGTCCCACGAAGGAAAACCCCCCTTTGTTCTGAAGCATGGCTGACGGAGCATGTCAGATTTTGACCTGGA GATACGGAAGCGATTCGCCCAGCCGCTGGCTGTCGAGTCTGGGGAGTTTCCGGACGTCGGGCTCGTCACAGCTCG GATGCTACCCATGTGCTACGAGGCTGGGCTGGTGGGCGGTCATGCCGCCGACGCGCCGCAGCTCATGGGTGTCGC GACGGAGACGTTTATCAAGGAGATATTGACGCAACTTTTCAGCCGTACGCGGAGCAATGGACCGGGAGACTCGGG GAGCGCGGGCCCGGGAATCGGCACGACCTGGATCCAGACGCGCAAGTATCAACGACAGCTCCGGATAGAGGAGGA GGCGGCGCAGCGGGGCGAGTTGTCGCGAGACAAAAATGGGCTACTTCCCGTCGAGGCCAAGGCGGCCGCGGATCG GCCACAGCTGGGCATGGCCGACCTGCGGCTATCGCTCGAGCTGGCGGACTCGGGCATGGCGCAGTTTCCTGCCCT CCGGACGCAGGTGTTGCTCGGATACCGCGACGGCGAACTGGAGAACTGGGACGACTACACGTACATTGGCGGCAA ACGACCCGAACCCGTCGATTCTGGTGGCATGGCAAGACAGGAGCAATCAGGAGCGCTTAACGGGCACGCCGAAGC CATGGACATTGACGCCGGCGACGGTTGGTGGGAAGGGGCGGAGAGGCAAGACGTGGACATGCTGGACGGCATCCT GGACTCATGCCTGGCGGTAGGGTCCTAG |