Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|6144
Gene name
LocationContig_65:33247..34612
Strand+
Gene length (bp)1365
Transcript length (bp)1257
Coding sequence length (bp)1257
Protein length (aa) 419

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00002 7tm_2 7 transmembrane receptor (Secretin family) 2.0E-14 17 216
PF05462 Dicty_CAR Slime mold cyclic AMP receptor 3.4E-06 29 191
PF11710 Git3 G protein-coupled glucose receptor regulating Gpa2 1.5E-05 29 203

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q54U75|CRLA_DICDI Cyclic AMP receptor-like protein A OS=Dictyostelium discoideum GN=crlA PE=2 SV=1 5 208 6.0E-14

GO

GO Term Description Terminal node
GO:0007186 G protein-coupled receptor signaling pathway Yes
GO:0016021 integral component of membrane Yes
GO:0004930 G protein-coupled receptor activity Yes
GO:0050789 regulation of biological process No
GO:0004888 transmembrane signaling receptor activity No
GO:0065007 biological regulation No
GO:0007165 signal transduction No
GO:0031224 intrinsic component of membrane No
GO:0003674 molecular_function No
GO:0038023 signaling receptor activity No
GO:0009987 cellular process No
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No
GO:0050794 regulation of cellular process No
GO:0008150 biological_process No
GO:0060089 molecular transducer activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 68 0.5

Transmembrane Domains

Domain # Start End Length
1 26 43 17
2 50 72 22
3 99 116 17
4 125 147 22
5 178 200 22
6 357 376 19
7 391 413 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|6144
MLRHPSDPGLTTAEIEKLITIERTGAGLSMVAIGLTVLSFLVFKKLRTTPNMFLVFASLANAGASVASMIGYDGL
HKGEESSLCQAQAFIFEWFMQSDPWWSFAMAVNVFLVFFNNADPASFRRYIWAYCLVCFGGPLIPAVVLISITGD
PRGPVYGDAALWCWISDSWGLVRLYAYYIPIWLCIMMSFVIYFAVGYQVFHRRNQLMSMSMHEKAQQKPFRFGRR
GFDSAEEARSSSVPSLMAIMRSNTIWQSLTRRQEVYGTVVTEVHVTSALPPLDFDSPRAPPRSHARGGLPCTSSW
ASGLHGESSIIRNNHHHFETICSSDSPRPKKRTCFEFIKAVFAEASLRLKRLDPVKMAYLRTSFIFGFSVLITWI
PSSVNRLYTLANGGRISFTLSVASGCVLPLQGVWNAIIYLTTS*
Coding >Ophun1|6144
ATGCTGCGCCATCCAAGCGACCCGGGCCTCACCACGGCCGAGATCGAGAAGCTCATCACCATCGAGCGAACCGGT
GCTGGCCTCTCCATGGTGGCCATAGGCCTCACTGTCCTCTCCTTTTTGGTTTTCAAGAAACTTCGCACCACTCCC
AATATGTTTCTGGTCTTTGCCTCCCTCGCCAATGCTGGAGCCAGTGTCGCCTCCATGATCGGTTACGATGGCCTT
CACAAGGGAGAAGAATCTTCTCTCTGCCAAGCTCAGGCCTTCATCTTCGAATGGTTCATGCAGTCGGATCCTTGG
TGGTCGTTTGCCATGGCGGTCAACGTCTTCCTCGTCTTCTTCAACAACGCAGATCCCGCTTCTTTCCGAAGATAC
ATCTGGGCCTACTGCCTTGTTTGCTTTGGTGGTCCTCTGATTCCCGCTGTCGTCCTCATCTCCATCACAGGTGAC
CCCCGGGGTCCTGTCTACGGTGATGCTGCACTTTGGTGCTGGATCAGCGATAGTTGGGGACTTGTTCGGCTGTAT
GCCTACTACATCCCAATCTGGCTGTGCATCATGATGTCCTTTGTCATCTACTTCGCCGTGGGATACCAAGTCTTT
CATCGTCGAAACCAGTTGATGAGCATGTCCATGCACGAAAAAGCCCAGCAGAAGCCATTCAGGTTCGGAAGAAGG
GGCTTCGACTCTGCCGAGGAGGCACGCAGTTCCTCTGTTCCGTCCTTGATGGCCATTATGCGTTCTAACACCATC
TGGCAGAGCCTCACACGACGACAAGAAGTCTACGGAACCGTCGTCACCGAGGTTCATGTCACATCCGCTCTGCCG
CCCCTCGACTTTGACTCGCCTCGGGCCCCGCCTCGCTCGCATGCCCGAGGCGGCCTCCCCTGCACTTCGTCTTGG
GCTTCTGGTCTTCATGGTGAGAGCTCAATCATTCGCAACAATCATCATCATTTTGAGACCATCTGCTCGTCCGAT
AGTCCCCGTCCCAAGAAACGCACCTGCTTTGAATTCATCAAGGCCGTCTTTGCCGAAGCATCCCTACGACTGAAG
CGTCTTGACCCGGTCAAGATGGCCTACCTGCGCACCAGCTTCATCTTTGGCTTTTCGGTCCTCATCACCTGGATT
CCGAGCTCCGTCAACAGGCTGTACACGCTGGCCAACGGGGGACGCATCAGCTTCACCCTCAGCGTCGCCAGCGGC
TGTGTGCTTCCGCTGCAGGGGGTCTGGAACGCCATCATCTACCTCACGACAAGCTAG
Transcript >Ophun1|6144
ATGCTGCGCCATCCAAGCGACCCGGGCCTCACCACGGCCGAGATCGAGAAGCTCATCACCATCGAGCGAACCGGT
GCTGGCCTCTCCATGGTGGCCATAGGCCTCACTGTCCTCTCCTTTTTGGTTTTCAAGAAACTTCGCACCACTCCC
AATATGTTTCTGGTCTTTGCCTCCCTCGCCAATGCTGGAGCCAGTGTCGCCTCCATGATCGGTTACGATGGCCTT
CACAAGGGAGAAGAATCTTCTCTCTGCCAAGCTCAGGCCTTCATCTTCGAATGGTTCATGCAGTCGGATCCTTGG
TGGTCGTTTGCCATGGCGGTCAACGTCTTCCTCGTCTTCTTCAACAACGCAGATCCCGCTTCTTTCCGAAGATAC
ATCTGGGCCTACTGCCTTGTTTGCTTTGGTGGTCCTCTGATTCCCGCTGTCGTCCTCATCTCCATCACAGGTGAC
CCCCGGGGTCCTGTCTACGGTGATGCTGCACTTTGGTGCTGGATCAGCGATAGTTGGGGACTTGTTCGGCTGTAT
GCCTACTACATCCCAATCTGGCTGTGCATCATGATGTCCTTTGTCATCTACTTCGCCGTGGGATACCAAGTCTTT
CATCGTCGAAACCAGTTGATGAGCATGTCCATGCACGAAAAAGCCCAGCAGAAGCCATTCAGGTTCGGAAGAAGG
GGCTTCGACTCTGCCGAGGAGGCACGCAGTTCCTCTGTTCCGTCCTTGATGGCCATTATGCGTTCTAACACCATC
TGGCAGAGCCTCACACGACGACAAGAAGTCTACGGAACCGTCGTCACCGAGGTTCATGTCACATCCGCTCTGCCG
CCCCTCGACTTTGACTCGCCTCGGGCCCCGCCTCGCTCGCATGCCCGAGGCGGCCTCCCCTGCACTTCGTCTTGG
GCTTCTGGTCTTCATGGTGAGAGCTCAATCATTCGCAACAATCATCATCATTTTGAGACCATCTGCTCGTCCGAT
AGTCCCCGTCCCAAGAAACGCACCTGCTTTGAATTCATCAAGGCCGTCTTTGCCGAAGCATCCCTACGACTGAAG
CGTCTTGACCCGGTCAAGATGGCCTACCTGCGCACCAGCTTCATCTTTGGCTTTTCGGTCCTCATCACCTGGATT
CCGAGCTCCGTCAACAGGCTGTACACGCTGGCCAACGGGGGACGCATCAGCTTCACCCTCAGCGTCGCCAGCGGC
TGTGTGCTTCCGCTGCAGGGGGTCTGGAACGCCATCATCTACCTCACGACAAGCTAG
Gene >Ophun1|6144
ATGCTGCGCCATCCAAGCGACCCGGGCCTCACCACGGCCGAGATCGAGAAGCTCATCACCATCGAGCGAACCGGT
GCTGGCCTCTCCATGGTGGCCATAGGCCTCACTGTCCTCTCCTTTTTGGTTTTCAAGAAACTTCGCACCACTCCC
AATATGTTTCTGGTCTTTGCCTCCCTCGCCAATGCTGGAGCCAGTGTCGCCTCCATGATCGGTTACGATGGCCTT
CACAAGGGAGAAGAATCTTCTCTCTGCCAAGCTCAGGCCTTCATCTTCGAATGGTGTGTTGACATTCATCCTCGC
CTGTGGCTCTCTGCTAATGAATGCACGCAGGTTCATGCAGTCGGATCCTTGGTGGTCGTTTGCCATGGCGGTCAA
CGTCTTCCTCGTCTTCTTCAACAACGCAGATCCCGCTTCTTTCCGAAGATACATCTGGGCCTACTGCCTTGTTTG
CTTTGGTGGTCCTCTGATTCCCGCTGTCGTCCTCATCTCCATCACAGGTGACCCCCGGGGTCCTGTCTACGGTGA
TGCTGCAGTAAGTCTTGCTCCATTCCTTGATTCTCTGCCGAGCCCGAGCTCACTCATTCGCAGCTTTGGTGCTGG
ATCAGCGATAGTTGGGGACTTGTTCGGCTGTATGCCTACTACATCCCAATCTGGCTGTGCATCATGATGTCCTTT
GTCATCTACTTCGCCGTGGGATACCAAGTCTTTCATCGTCGAAACCAGTTGATGAGCATGTCCATGCACGAAAAA
GCCCAGCAGAAGCCATTCAGGTTCGGAAGAAGGGGCTTCGACTCTGCCGAGGAGGCACGCAGTTCCTCTGTTCCG
TCCTTGATGGCCATTATGCGTTCTAACACCATCTGGCAGAGCCTCACACGACGACAAGAAGTCTACGGAACCGTC
GTCACCGAGGTTCATGTCACATCCGCTCTGCCGCCCCTCGACTTTGACTCGCCTCGGGCCCCGCCTCGCTCGCAT
GCCCGAGGCGGCCTCCCCTGCACTTCGTCTTGGGCTTCTGGTCTTCATGGTGAGAGCTCAATCATTCGCAACAAT
CATCATCATTTTGAGACCATCTGCTCGTCCGATAGTCCCCGTCCCAAGAAACGCACCTGCTTTGAATTCATCAAG
GCCGTCTTTGCCGAAGCATCCCTACGACTGAAGCGTCTTGACCCGGTCAAGATGGCCTACCTGCGCACCAGCTTC
ATCTTTGGCTTTTCGGTCCTCATCACCTGGATTCCGAGCTCCGTCAACAGGCTGTACACGCTGGCCAACGGGGGA
CGCATCAGCTTCACCCTCAGCGTCGCCAGCGGCTGTGTGCTTCCGCTGCAGGGGGTCTGGAACGCCATCATCTAC
CTCACGACAAGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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