Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|6131
Gene name
LocationContig_649:8196..9044
Strand+
Gene length (bp)848
Transcript length (bp)783
Coding sequence length (bp)783
Protein length (aa) 261

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00462 Glutaredoxin Glutaredoxin 1.3E-12 149 211

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P38068|GLRX7_YEAST Monothiol glutaredoxin-7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX7 PE=1 SV=1 133 249 1.0E-22
sp|Q12438|GLRX6_YEAST Monothiol glutaredoxin-6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX6 PE=1 SV=1 132 251 2.0E-16
sp|Q0DAE4|GRXC8_ORYSJ Glutaredoxin-C8 OS=Oryza sativa subsp. japonica GN=GRXC8 PE=2 SV=2 142 236 6.0E-15
sp|Q8LFQ6|GRXC4_ARATH Glutaredoxin-C4 OS=Arabidopsis thaliana GN=GRXC4 PE=2 SV=2 144 239 1.0E-13
sp|B7ZFT1|GLRX1_RHIID Glutaredoxin-1 OS=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) GN=GRX1 PE=2 SV=3 140 236 4.0E-13
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Swissprot ID Swissprot Description Start End E-value
sp|P38068|GLRX7_YEAST Monothiol glutaredoxin-7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX7 PE=1 SV=1 133 249 1.0E-22
sp|Q12438|GLRX6_YEAST Monothiol glutaredoxin-6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX6 PE=1 SV=1 132 251 2.0E-16
sp|Q0DAE4|GRXC8_ORYSJ Glutaredoxin-C8 OS=Oryza sativa subsp. japonica GN=GRXC8 PE=2 SV=2 142 236 6.0E-15
sp|Q8LFQ6|GRXC4_ARATH Glutaredoxin-C4 OS=Arabidopsis thaliana GN=GRXC4 PE=2 SV=2 144 239 1.0E-13
sp|B7ZFT1|GLRX1_RHIID Glutaredoxin-1 OS=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) GN=GRX1 PE=2 SV=3 140 236 4.0E-13
sp|Q6K953|GRXC4_ORYSJ Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXC4 PE=3 SV=1 129 234 4.0E-12
sp|Q9UTI2|GLRX2_SCHPO Glutaredoxin-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=grx2 PE=3 SV=1 136 240 2.0E-11
sp|Q9NS18|GLRX2_HUMAN Glutaredoxin-2, mitochondrial OS=Homo sapiens GN=GLRX2 PE=1 SV=1 138 234 2.0E-11
sp|Q32L67|GLRX2_BOVIN Glutaredoxin-2, mitochondrial OS=Bos taurus GN=GLRX2 PE=2 SV=1 138 234 4.0E-11
sp|Q6H628|GRXS6_ORYSJ Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica GN=GRXS6 PE=2 SV=1 141 241 5.0E-11
sp|Q5RC53|GLRX2_PONAB Glutaredoxin-2, mitochondrial OS=Pongo abelii GN=GLRX2 PE=2 SV=1 139 234 7.0E-11
sp|P55142|GRXC6_ORYSJ Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2 144 234 3.0E-10
sp|Q6AXW1|GLRX2_RAT Glutaredoxin-2, mitochondrial OS=Rattus norvegicus GN=Glrx2 PE=2 SV=2 139 234 3.0E-10
sp|Q9ZR41|GLRX_SOLLC Glutaredoxin OS=Solanum lycopersicum PE=3 SV=1 143 234 4.0E-10
sp|Q9FVX1|GRXC3_ARATH Glutaredoxin-C3 OS=Arabidopsis thaliana GN=GRXC3 PE=2 SV=1 141 236 6.0E-10
sp|Q9FNE2|GRXC2_ARATH Glutaredoxin-C2 OS=Arabidopsis thaliana GN=GRXC2 PE=2 SV=1 143 234 1.0E-09
sp|Q923X4|GLRX2_MOUSE Glutaredoxin-2, mitochondrial OS=Mus musculus GN=Glrx2 PE=1 SV=1 139 234 1.0E-09
sp|Q9Y7N3|GLRX3_SCHPO Monothiol glutaredoxin-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=grx3 PE=3 SV=3 147 244 2.0E-09
sp|Q8L8T2|GRXC1_ARATH Glutaredoxin-C1 OS=Arabidopsis thaliana GN=GRXC1 PE=2 SV=2 143 235 4.0E-09
sp|O36032|GLRX1_SCHPO Glutaredoxin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=grx1 PE=3 SV=1 140 241 5.0E-09
sp|Q54GP8|GLRX_DICDI Glutaredoxin OS=Dictyostelium discoideum GN=grxA PE=2 SV=1 142 234 8.0E-09
sp|Q0J3L4|GRS10_ORYSJ Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica GN=GRXS10 PE=2 SV=2 148 240 1.0E-08
sp|P55143|GLRX_RICCO Glutaredoxin OS=Ricinus communis PE=3 SV=1 143 224 2.0E-08
sp|Q8LBS4|GRS12_ARATH Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana GN=GRXS12 PE=1 SV=2 144 241 4.0E-08
sp|P17695|GLRX2_YEAST Glutaredoxin-2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX2 PE=1 SV=3 143 236 1.0E-07
sp|P25373|GLRX1_YEAST Glutaredoxin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX1 PE=1 SV=1 138 225 3.0E-07
sp|Q86VQ6|TRXR3_HUMAN Thioredoxin reductase 3 OS=Homo sapiens GN=TXNRD3 PE=1 SV=4 122 236 1.0E-06
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GO

GO Term Description Terminal node
GO:0097573 glutathione oxidoreductase activity Yes
GO:0015036 disulfide oxidoreductase activity No
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors No
GO:0003674 molecular_function No
GO:0015035 protein-disulfide reductase activity No
GO:0140096 catalytic activity, acting on a protein No
GO:0003824 catalytic activity No
GO:0016491 oxidoreductase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|6131
MPSPRRLRLLMVATVVGVVLILFYASSFDDSASQDSRTIKDFYRKTMDGMKKGSPPGQTVLDKEGKADKTGDDQR
LASSTKERLKAAEEKAKAKANTKALRPDPPSQLVGVGNSADGQAKKPPRPADLEPKKEFDARKELDAIVKGRPVV
IFSKTTCPFSQHAKGILLEKYHIEPKPYVVELDTHEHGKALQDELYRRTQQRTVPNIIINDGSGDVTSLGGSDDM
VELDKAGTLARKFGDATKGLAHVKLRRLAVNPRRL*
Coding >Ophun1|6131
ATGCCCTCGCCGCGTCGCCTGCGGCTGCTGATGGTAGCCACCGTCGTCGGCGTAGTCCTCATCCTCTTCTACGCC
TCATCCTTCGACGACTCCGCCAGCCAAGACTCACGCACGATAAAAGACTTCTACCGCAAGACAATGGACGGCATG
AAAAAGGGCTCACCGCCGGGCCAAACCGTCCTCGACAAGGAAGGCAAGGCAGACAAGACGGGCGACGACCAGCGC
CTCGCATCCAGCACAAAAGAGCGCCTCAAGGCCGCCGAGGAAAAGGCAAAGGCAAAGGCCAATACCAAGGCCCTG
CGCCCAGATCCCCCAAGCCAGCTCGTCGGCGTCGGAAACTCGGCCGACGGTCAGGCCAAGAAACCCCCGCGGCCT
GCGGACCTCGAACCCAAGAAGGAGTTTGACGCCCGGAAGGAGCTCGATGCCATTGTCAAGGGACGGCCTGTCGTC
ATCTTCTCCAAAACAACGTGCCCCTTTTCCCAGCACGCCAAGGGCATCCTCCTCGAAAAATACCACATCGAACCC
AAGCCGTACGTGGTAGAGCTCGACACGCACGAGCACGGCAAGGCGCTACAAGACGAGCTCTACCGACGCACCCAG
CAACGAACCGTCCCCAACATCATCATCAACGACGGCAGCGGCGACGTCACCAGCCTGGGAGGCAGCGACGACATG
GTCGAGCTCGACAAGGCGGGCACCCTGGCGCGCAAGTTTGGAGACGCCACCAAGGGCCTCGCTCACGTCAAGCTG
CGGCGACTGGCTGTCAACCCGCGCCGTCTGTGA
Transcript >Ophun1|6131
ATGCCCTCGCCGCGTCGCCTGCGGCTGCTGATGGTAGCCACCGTCGTCGGCGTAGTCCTCATCCTCTTCTACGCC
TCATCCTTCGACGACTCCGCCAGCCAAGACTCACGCACGATAAAAGACTTCTACCGCAAGACAATGGACGGCATG
AAAAAGGGCTCACCGCCGGGCCAAACCGTCCTCGACAAGGAAGGCAAGGCAGACAAGACGGGCGACGACCAGCGC
CTCGCATCCAGCACAAAAGAGCGCCTCAAGGCCGCCGAGGAAAAGGCAAAGGCAAAGGCCAATACCAAGGCCCTG
CGCCCAGATCCCCCAAGCCAGCTCGTCGGCGTCGGAAACTCGGCCGACGGTCAGGCCAAGAAACCCCCGCGGCCT
GCGGACCTCGAACCCAAGAAGGAGTTTGACGCCCGGAAGGAGCTCGATGCCATTGTCAAGGGACGGCCTGTCGTC
ATCTTCTCCAAAACAACGTGCCCCTTTTCCCAGCACGCCAAGGGCATCCTCCTCGAAAAATACCACATCGAACCC
AAGCCGTACGTGGTAGAGCTCGACACGCACGAGCACGGCAAGGCGCTACAAGACGAGCTCTACCGACGCACCCAG
CAACGAACCGTCCCCAACATCATCATCAACGACGGCAGCGGCGACGTCACCAGCCTGGGAGGCAGCGACGACATG
GTCGAGCTCGACAAGGCGGGCACCCTGGCGCGCAAGTTTGGAGACGCCACCAAGGGCCTCGCTCACGTCAAGCTG
CGGCGACTGGCTGTCAACCCGCGCCGTCTGTGA
Gene >Ophun1|6131
ATGCCCTCGCCGCGTCGCCTGCGGCTGCTGATGGTAGCCACCGTCGTCGGCGTAGTCCTCATCCTCTTCTACGCC
TCATCCTTCGACGACTCCGCCAGCCAAGACTCACGCACGATAAAAGACTTCTACCGCAAGACAATGGACGGCATG
AAAAAGGGCTCACCGCCGGGCCAAACCGTCCTCGACAAGGAAGGCAAGGCAGACAAGACGGGCGACGACCAGCGC
CTCGCATCCAGCACAAAAGAGCGCCTCAAGGCCGCCGAGGAAAAGGCAAAGGCAAAGGCCAATACCAAGGCCCTG
CGCCCAGATCCCCCAAGCCAGCTCGTCGGCGTCGGAAACTCGGCCGACGGTCAGGCCAAGAAACCCCCGCGGCCT
GCGGACCTCGAACCCAAGAAGGAGTTTGACGCCCGGAAGGAGCTCGATGCCATTGTCAAGGGACGGCCTGGTTAG
TTGACTCTTCCTACCTGACCCATTGCTTGACGAATAGCTTACACTCTCATTCTGCAACAGTCGTCATCTTCTCCA
AAACAACGTGCCCCTTTTCCCAGCACGCCAAGGGCATCCTCCTCGAAAAATACCACATCGAACCCAAGCCGTACG
TGGTAGAGCTCGACACGCACGAGCACGGCAAGGCGCTACAAGACGAGCTCTACCGACGCACCCAGCAACGAACCG
TCCCCAACATCATCATCAACGACGGCAGCGGCGACGTCACCAGCCTGGGAGGCAGCGACGACATGGTCGAGCTCG
ACAAGGCGGGCACCCTGGCGCGCAAGTTTGGAGACGCCACCAAGGGCCTCGCTCACGTCAAGCTGCGGCGACTGG
CTGTCAACCCGCGCCGTCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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