Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|6116
Gene name
Location	Contig_646:4354..5593
Strand	-
Gene length (bp)	1239
Transcript length (bp)	1239
Coding sequence length (bp)	1239
Protein length (aa)	413

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04757	Pex2_Pex12	Pex2 / Pex12 amino terminal region	2.3E-36	64	261

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P51021\|PEX2_PODAS	Peroxisomal biogenesis factor 2 OS=Podospora anserina GN=PEX2 PE=3 SV=1	5	411	1.0E-179
sp\|Q99155\|PEX2_YARLI	Peroxisomal biogenesis factor 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PEX2 PE=3 SV=2	51	372	3.0E-75
sp\|Q01964\|PEX2_PICPA	Peroxisomal biogenesis factor 2 OS=Komagataella pastoris GN=PEX2 PE=3 SV=1	50	408	1.0E-48
sp\|Q75JQ3\|PEX2_DICDI	Peroxisome biogenesis factor 2 OS=Dictyostelium discoideum GN=pex2 PE=3 SV=1	54	373	9.0E-45
sp\|P24392\|PEX2_RAT	Peroxisome biogenesis factor 2 OS=Rattus norvegicus GN=Pex2 PE=2 SV=1	45	376	5.0E-29

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P51021\|PEX2_PODAS	Peroxisomal biogenesis factor 2 OS=Podospora anserina GN=PEX2 PE=3 SV=1	5	411	1.0E-179
sp\|Q99155\|PEX2_YARLI	Peroxisomal biogenesis factor 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PEX2 PE=3 SV=2	51	372	3.0E-75
sp\|Q01964\|PEX2_PICPA	Peroxisomal biogenesis factor 2 OS=Komagataella pastoris GN=PEX2 PE=3 SV=1	50	408	1.0E-48
sp\|Q75JQ3\|PEX2_DICDI	Peroxisome biogenesis factor 2 OS=Dictyostelium discoideum GN=pex2 PE=3 SV=1	54	373	9.0E-45
sp\|P24392\|PEX2_RAT	Peroxisome biogenesis factor 2 OS=Rattus norvegicus GN=Pex2 PE=2 SV=1	45	376	5.0E-29
sp\|P55098\|PEX2_MOUSE	Peroxisome biogenesis factor 2 OS=Mus musculus GN=Pex2 PE=2 SV=1	45	376	1.0E-28
sp\|Q06438\|PEX2_CRIGR	Peroxisome biogenesis factor 2 OS=Cricetulus griseus GN=PEX2 PE=1 SV=1	46	261	3.0E-28
sp\|P28328\|PEX2_HUMAN	Peroxisome biogenesis factor 2 OS=Homo sapiens GN=PEX2 PE=1 SV=2	43	261	8.0E-28
sp\|Q9CA86\|PEX2_ARATH	Peroxisome biogenesis protein 2 OS=Arabidopsis thaliana GN=PEX2 PE=1 SV=1	54	366	5.0E-27

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 46	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|6116 MTDSSFVLAQQRVAARNRARQAQHAAAEARPRLQPLFHFLQGARSREGTRPAFRVSQVDAELLDDELVELLRAQV GDALRYFADGHLQDDWAAEVSLVLRAVLFKLTVWDHDATYGAALQNLRYTDARRDGLVLVPPSRLQKSLYGLVTV VGRYAWTKLEDWLVDDEPDGRGRLLSRWTSTLSTLHSAAALVSFLVFLLHGRYRTLLDRVLRMRLAPPTSQVSRE VSFEYLNRQLVWHAFTEFLLFVLPLVGINRWRRWLSRTWRRTKEMMRTDHDDGDGHGARGELAFLPERTCAICYQ DQNQGTMTETELILAPSGVVGSAQTDVTNPYEATPCGCVYCFVCLATRLEREEGEGWTCLRCGEHIRECRPWSGD VLEPRVRKSSSAKTVAFSDDFREGEGRKTIGESEKDL*
Coding	>Ophun1\|6116 ATGACCGACTCGAGCTTCGTCCTCGCCCAGCAGCGAGTGGCGGCCCGAAACCGAGCCCGCCAAGCCCAGCACGCC GCCGCCGAGGCCCGGCCCCGTCTGCAGCCCCTTTTCCATTTCCTGCAAGGCGCGCGGTCGCGAGAGGGAACGCGG CCGGCCTTTCGCGTCTCGCAGGTCGACGCTGAGCTGCTCGACGATGAGCTGGTCGAGTTGTTGCGGGCGCAGGTC GGCGATGCGCTGCGGTACTTTGCCGATGGACACTTGCAGGATGACTGGGCGGCTGAGGTTTCGCTCGTCTTGCGC GCTGTGCTCTTTAAGCTCACCGTCTGGGATCACGATGCGACGTACGGTGCGGCCTTGCAGAATTTGCGATATACG GATGCGAGGAGGGATGGGCTCGTGCTGGTGCCGCCTTCGAGGCTGCAAAAGTCGCTCTATGGCCTCGTCACTGTC GTCGGCAGGTATGCGTGGACCAAGTTGGAGGACTGGCTTGTCGATGACGAGCCTGACGGCCGCGGACGATTACTC TCGCGATGGACTTCGACCTTGTCTACGCTGCATTCGGCTGCTGCGCTCGTCTCTTTCCTCGTCTTTCTCTTACAC GGCCGCTATCGCACGCTGCTGGATCGTGTGTTGCGGATGCGACTCGCGCCCCCGACCAGCCAGGTCAGCCGCGAG GTGTCGTTTGAGTATCTTAACCGGCAGCTGGTGTGGCACGCCTTTACCGAATTCCTGCTCTTCGTGTTGCCGCTC GTGGGCATCAACCGCTGGCGGCGCTGGCTGAGCCGCACCTGGCGGAGGACCAAGGAGATGATGCGCACCGACCAT GACGACGGAGACGGTCACGGCGCCCGGGGAGAGCTGGCATTCCTCCCCGAGCGGACCTGCGCCATCTGCTATCAG GATCAGAACCAGGGGACGATGACGGAGACAGAGCTGATACTGGCGCCCAGCGGCGTCGTCGGCTCGGCGCAGACG GACGTGACGAACCCGTACGAGGCGACGCCGTGCGGCTGCGTCTACTGCTTCGTCTGCTTGGCTACCCGGCTCGAG AGGGAGGAGGGCGAGGGCTGGACGTGTCTGCGGTGCGGCGAGCATATCCGGGAGTGTAGGCCGTGGAGCGGGGAC GTGCTGGAGCCGCGGGTGCGCAAGTCGAGCTCGGCGAAGACGGTAGCCTTTTCCGATGATTTCAGGGAGGGCGAG GGGAGGAAGACAATAGGAGAGTCGGAGAAGGACTTGTGA
Transcript	>Ophun1\|6116 ATGACCGACTCGAGCTTCGTCCTCGCCCAGCAGCGAGTGGCGGCCCGAAACCGAGCCCGCCAAGCCCAGCACGCC GCCGCCGAGGCCCGGCCCCGTCTGCAGCCCCTTTTCCATTTCCTGCAAGGCGCGCGGTCGCGAGAGGGAACGCGG CCGGCCTTTCGCGTCTCGCAGGTCGACGCTGAGCTGCTCGACGATGAGCTGGTCGAGTTGTTGCGGGCGCAGGTC GGCGATGCGCTGCGGTACTTTGCCGATGGACACTTGCAGGATGACTGGGCGGCTGAGGTTTCGCTCGTCTTGCGC GCTGTGCTCTTTAAGCTCACCGTCTGGGATCACGATGCGACGTACGGTGCGGCCTTGCAGAATTTGCGATATACG GATGCGAGGAGGGATGGGCTCGTGCTGGTGCCGCCTTCGAGGCTGCAAAAGTCGCTCTATGGCCTCGTCACTGTC GTCGGCAGGTATGCGTGGACCAAGTTGGAGGACTGGCTTGTCGATGACGAGCCTGACGGCCGCGGACGATTACTC TCGCGATGGACTTCGACCTTGTCTACGCTGCATTCGGCTGCTGCGCTCGTCTCTTTCCTCGTCTTTCTCTTACAC GGCCGCTATCGCACGCTGCTGGATCGTGTGTTGCGGATGCGACTCGCGCCCCCGACCAGCCAGGTCAGCCGCGAG GTGTCGTTTGAGTATCTTAACCGGCAGCTGGTGTGGCACGCCTTTACCGAATTCCTGCTCTTCGTGTTGCCGCTC GTGGGCATCAACCGCTGGCGGCGCTGGCTGAGCCGCACCTGGCGGAGGACCAAGGAGATGATGCGCACCGACCAT GACGACGGAGACGGTCACGGCGCCCGGGGAGAGCTGGCATTCCTCCCCGAGCGGACCTGCGCCATCTGCTATCAG GATCAGAACCAGGGGACGATGACGGAGACAGAGCTGATACTGGCGCCCAGCGGCGTCGTCGGCTCGGCGCAGACG GACGTGACGAACCCGTACGAGGCGACGCCGTGCGGCTGCGTCTACTGCTTCGTCTGCTTGGCTACCCGGCTCGAG AGGGAGGAGGGCGAGGGCTGGACGTGTCTGCGGTGCGGCGAGCATATCCGGGAGTGTAGGCCGTGGAGCGGGGAC GTGCTGGAGCCGCGGGTGCGCAAGTCGAGCTCGGCGAAGACGGTAGCCTTTTCCGATGATTTCAGGGAGGGCGAG GGGAGGAAGACAATAGGAGAGTCGGAGAAGGACTTGTGA
Gene	>Ophun1\|6116 ATGACCGACTCGAGCTTCGTCCTCGCCCAGCAGCGAGTGGCGGCCCGAAACCGAGCCCGCCAAGCCCAGCACGCC GCCGCCGAGGCCCGGCCCCGTCTGCAGCCCCTTTTCCATTTCCTGCAAGGCGCGCGGTCGCGAGAGGGAACGCGG CCGGCCTTTCGCGTCTCGCAGGTCGACGCTGAGCTGCTCGACGATGAGCTGGTCGAGTTGTTGCGGGCGCAGGTC GGCGATGCGCTGCGGTACTTTGCCGATGGACACTTGCAGGATGACTGGGCGGCTGAGGTTTCGCTCGTCTTGCGC GCTGTGCTCTTTAAGCTCACCGTCTGGGATCACGATGCGACGTACGGTGCGGCCTTGCAGAATTTGCGATATACG GATGCGAGGAGGGATGGGCTCGTGCTGGTGCCGCCTTCGAGGCTGCAAAAGTCGCTCTATGGCCTCGTCACTGTC GTCGGCAGGTATGCGTGGACCAAGTTGGAGGACTGGCTTGTCGATGACGAGCCTGACGGCCGCGGACGATTACTC TCGCGATGGACTTCGACCTTGTCTACGCTGCATTCGGCTGCTGCGCTCGTCTCTTTCCTCGTCTTTCTCTTACAC GGCCGCTATCGCACGCTGCTGGATCGTGTGTTGCGGATGCGACTCGCGCCCCCGACCAGCCAGGTCAGCCGCGAG GTGTCGTTTGAGTATCTTAACCGGCAGCTGGTGTGGCACGCCTTTACCGAATTCCTGCTCTTCGTGTTGCCGCTC GTGGGCATCAACCGCTGGCGGCGCTGGCTGAGCCGCACCTGGCGGAGGACCAAGGAGATGATGCGCACCGACCAT GACGACGGAGACGGTCACGGCGCCCGGGGAGAGCTGGCATTCCTCCCCGAGCGGACCTGCGCCATCTGCTATCAG GATCAGAACCAGGGGACGATGACGGAGACAGAGCTGATACTGGCGCCCAGCGGCGTCGTCGGCTCGGCGCAGACG GACGTGACGAACCCGTACGAGGCGACGCCGTGCGGCTGCGTCTACTGCTTCGTCTGCTTGGCTACCCGGCTCGAG AGGGAGGAGGGCGAGGGCTGGACGTGTCTGCGGTGCGGCGAGCATATCCGGGAGTGTAGGCCGTGGAGCGGGGAC GTGCTGGAGCCGCGGGTGCGCAAGTCGAGCTCGGCGAAGACGGTAGCCTTTTCCGATGATTTCAGGGAGGGCGAG GGGAGGAAGACAATAGGAGAGTCGGAGAAGGACTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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