Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|6032
Gene name
LocationContig_63:23748..25860
Strand-
Gene length (bp)2112
Transcript length (bp)2052
Coding sequence length (bp)2052
Protein length (aa) 684

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05277 DUF726 Protein of unknown function (DUF726) 9.0E-85 315 649

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9US10|YK68_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC607.08c PE=3 SV=1 244 645 9.0E-45
sp|Q5TGY1|TMCO4_HUMAN Transmembrane and coiled-coil domain-containing protein 4 OS=Homo sapiens GN=TMCO4 PE=2 SV=1 406 679 1.0E-39
sp|Q91WU4|TMCO4_MOUSE Transmembrane and coiled-coil domain-containing protein 4 OS=Mus musculus GN=Tmco4 PE=2 SV=2 406 646 1.0E-38
sp|Q499U8|TMCO4_RAT Transmembrane and coiled-coil domain-containing protein 4 OS=Rattus norvegicus GN=Tmco4 PE=2 SV=1 406 646 3.0E-37
sp|O14244|YELD_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6F6.13c PE=3 SV=1 404 667 2.0E-33
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9US10|YK68_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC607.08c PE=3 SV=1 244 645 9.0E-45
sp|Q5TGY1|TMCO4_HUMAN Transmembrane and coiled-coil domain-containing protein 4 OS=Homo sapiens GN=TMCO4 PE=2 SV=1 406 679 1.0E-39
sp|Q91WU4|TMCO4_MOUSE Transmembrane and coiled-coil domain-containing protein 4 OS=Mus musculus GN=Tmco4 PE=2 SV=2 406 646 1.0E-38
sp|Q499U8|TMCO4_RAT Transmembrane and coiled-coil domain-containing protein 4 OS=Rattus norvegicus GN=Tmco4 PE=2 SV=1 406 646 3.0E-37
sp|O14244|YELD_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6F6.13c PE=3 SV=1 404 667 2.0E-33
sp|P43564|YFD4_YEAST Uncharacterized membrane protein YFL034W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YFL034W PE=1 SV=2 405 654 3.0E-31
sp|Q20035|TMCO4_CAEEL Uncharacterized membrane protein F35D11.3 OS=Caenorhabditis elegans GN=F35D11.3 PE=3 SV=2 390 653 1.0E-30
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|6032
MGRMGRGGGHSAFRRIDLTGLLSIAERNDLATLVSAITDKMHNDISCIFDSPPVTPLIHQQEHHNWLSRAILNCA
ITDPPADLPGDDGSKAFAKAHKTVVKEEAEAMAPQLRELKKEALLFFTKWQTAVIQRTREMQVQDTPAANTRAGR
GGRGGYRGRGGRGGAVRNGRCGLTLATGETHPQCFFFALKTKTPTGPPQISPAAADPELATRFSPTPNTLWSLSF
DKRKLLLHLVMLLVLSLQDYGANARILVLNLASSLNLTFEIYHENELRISRALAKAALEFSSNQQSDQKPDVKVN
SRRWKNCLAAGSPASAGLAGRLKADGVGTMQHGPGLPPAAVAGLLGPMADHAHLLSNLFGISPIRPVSKMIDSCC
RDIQDFALVRLLDDGQHSEYRVAGETPAADRRLHVAVVMSGCLSQNRDVTEPWQCLGRETETYVVKWEVDALVDM
GVSFETVTKSLAWKTAKKDIAARFDASNLLNFSWPSQLLKISKIIDIPWSMGMVRAEKAGALLADAIIRHKFQGE
RSVSLIGYGLAARAIYTCLMVLAERRQFGLVDSVVMMGAPAPSESRVWLTLKSVVSGRLVNVYSKHDYLLAFLYR
TSNLHFGIAGLHEIQGAYGVENHCVGQLPRGHDDYHSLTGRILRDIAWEGVEVEAEPLSAPPKPARNPRPHRKNP
TRRPKAAR*
Coding >Ophun1|6032
ATGGGCCGCATGGGCCGCGGAGGCGGTCATTCCGCCTTTCGCCGCATCGACTTGACTGGCCTCCTTTCCATCGCC
GAAAGAAACGACTTGGCGACGCTCGTCAGTGCAATCACCGACAAGATGCACAACGACATCAGCTGCATCTTCGAC
TCGCCCCCCGTCACGCCCCTCATTCATCAGCAGGAACACCATAACTGGCTCTCGAGGGCCATTCTCAACTGCGCA
ATCACCGACCCTCCTGCCGACTTGCCCGGCGATGATGGCTCCAAGGCTTTCGCCAAAGCTCATAAAACAGTGGTC
AAAGAGGAAGCAGAGGCCATGGCACCTCAGCTTCGTGAGCTGAAGAAGGAGGCCCTGCTCTTCTTCACCAAGTGG
CAGACGGCCGTCATTCAGCGCACCCGCGAGATGCAGGTCCAAGACACGCCCGCCGCCAACACTCGAGCTGGCCGC
GGAGGCCGTGGCGGCTATCGCGGTCGCGGAGGCCGTGGAGGCGCCGTTAGAAACGGCCGTTGCGGCTTGACCTTG
GCTACCGGTGAGACTCACCCCCAGTGCTTCTTCTTCGCCCTAAAGACTAAAACGCCTACAGGACCACCCCAGATC
TCTCCCGCTGCTGCTGACCCCGAGCTAGCCACGAGGTTCTCGCCCACTCCCAACACGCTGTGGTCTCTGTCTTTC
GACAAGAGAAAGCTCCTGCTTCATCTCGTCATGCTGCTCGTCTTGTCGCTGCAGGACTACGGAGCCAACGCTCGC
ATTCTCGTGCTGAATCTCGCCTCGTCGCTCAACCTCACATTTGAAATATACCACGAGAACGAGCTTCGAATCTCT
CGCGCTCTCGCCAAGGCCGCCCTCGAATTCAGCTCCAATCAGCAGTCTGACCAGAAGCCCGACGTCAAGGTCAAC
TCTCGTCGGTGGAAGAACTGCCTCGCTGCCGGCTCTCCTGCCAGCGCCGGCCTCGCCGGTCGCCTCAAGGCCGAT
GGTGTCGGCACAATGCAGCACGGCCCTGGCCTCCCTCCTGCTGCCGTGGCAGGACTGCTGGGACCCATGGCGGAC
CATGCTCATCTTCTGAGCAACCTCTTCGGCATCAGCCCCATCAGGCCCGTCAGCAAGATGATCGACAGTTGCTGC
CGCGACATCCAGGACTTTGCCCTGGTCCGCCTGCTCGACGATGGGCAGCACTCCGAGTACCGCGTTGCAGGTGAG
ACGCCGGCCGCAGACCGTCGACTTCACGTAGCTGTTGTCATGAGCGGCTGTCTCTCTCAGAACAGGGACGTGACG
GAGCCGTGGCAGTGCCTCGGCCGCGAGACGGAGACGTACGTGGTCAAATGGGAGGTGGACGCACTCGTTGACATG
GGCGTCTCGTTCGAGACTGTCACCAAGAGCTTGGCTTGGAAGACGGCGAAGAAGGATATAGCGGCACGGTTCGAT
GCCTCGAATCTCTTGAATTTCTCCTGGCCGAGCCAGCTGCTCAAAATCAGCAAGATCATCGACATCCCCTGGAGC
ATGGGCATGGTGCGAGCCGAAAAGGCCGGCGCCCTCCTGGCCGATGCCATCATCCGACACAAGTTCCAGGGCGAG
CGCTCCGTCTCCCTCATCGGCTACGGCCTGGCAGCCCGAGCCATCTACACGTGCCTCATGGTGCTGGCCGAGCGT
CGTCAGTTCGGCCTGGTCGACTCGGTCGTCATGATGGGCGCGCCGGCTCCGTCGGAGAGCCGGGTGTGGCTGACT
CTCAAGAGCGTCGTGTCGGGTCGCCTTGTTAACGTTTACTCCAAGCACGACTATCTGCTGGCCTTTTTGTACCGA
ACCTCGAACCTGCACTTTGGCATCGCCGGCCTGCACGAGATTCAGGGGGCGTACGGCGTCGAGAACCACTGCGTC
GGCCAGCTGCCGCGCGGCCACGACGACTATCACAGCCTCACCGGCCGCATCCTCCGGGACATTGCCTGGGAGGGC
GTCGAGGTCGAGGCAGAGCCGCTGTCGGCGCCGCCCAAGCCGGCCAGGAATCCGCGCCCTCACAGGAAGAACCCG
ACGAGACGGCCCAAGGCGGCTCGCTAG
Transcript >Ophun1|6032
ATGGGCCGCATGGGCCGCGGAGGCGGTCATTCCGCCTTTCGCCGCATCGACTTGACTGGCCTCCTTTCCATCGCC
GAAAGAAACGACTTGGCGACGCTCGTCAGTGCAATCACCGACAAGATGCACAACGACATCAGCTGCATCTTCGAC
TCGCCCCCCGTCACGCCCCTCATTCATCAGCAGGAACACCATAACTGGCTCTCGAGGGCCATTCTCAACTGCGCA
ATCACCGACCCTCCTGCCGACTTGCCCGGCGATGATGGCTCCAAGGCTTTCGCCAAAGCTCATAAAACAGTGGTC
AAAGAGGAAGCAGAGGCCATGGCACCTCAGCTTCGTGAGCTGAAGAAGGAGGCCCTGCTCTTCTTCACCAAGTGG
CAGACGGCCGTCATTCAGCGCACCCGCGAGATGCAGGTCCAAGACACGCCCGCCGCCAACACTCGAGCTGGCCGC
GGAGGCCGTGGCGGCTATCGCGGTCGCGGAGGCCGTGGAGGCGCCGTTAGAAACGGCCGTTGCGGCTTGACCTTG
GCTACCGGTGAGACTCACCCCCAGTGCTTCTTCTTCGCCCTAAAGACTAAAACGCCTACAGGACCACCCCAGATC
TCTCCCGCTGCTGCTGACCCCGAGCTAGCCACGAGGTTCTCGCCCACTCCCAACACGCTGTGGTCTCTGTCTTTC
GACAAGAGAAAGCTCCTGCTTCATCTCGTCATGCTGCTCGTCTTGTCGCTGCAGGACTACGGAGCCAACGCTCGC
ATTCTCGTGCTGAATCTCGCCTCGTCGCTCAACCTCACATTTGAAATATACCACGAGAACGAGCTTCGAATCTCT
CGCGCTCTCGCCAAGGCCGCCCTCGAATTCAGCTCCAATCAGCAGTCTGACCAGAAGCCCGACGTCAAGGTCAAC
TCTCGTCGGTGGAAGAACTGCCTCGCTGCCGGCTCTCCTGCCAGCGCCGGCCTCGCCGGTCGCCTCAAGGCCGAT
GGTGTCGGCACAATGCAGCACGGCCCTGGCCTCCCTCCTGCTGCCGTGGCAGGACTGCTGGGACCCATGGCGGAC
CATGCTCATCTTCTGAGCAACCTCTTCGGCATCAGCCCCATCAGGCCCGTCAGCAAGATGATCGACAGTTGCTGC
CGCGACATCCAGGACTTTGCCCTGGTCCGCCTGCTCGACGATGGGCAGCACTCCGAGTACCGCGTTGCAGGTGAG
ACGCCGGCCGCAGACCGTCGACTTCACGTAGCTGTTGTCATGAGCGGCTGTCTCTCTCAGAACAGGGACGTGACG
GAGCCGTGGCAGTGCCTCGGCCGCGAGACGGAGACGTACGTGGTCAAATGGGAGGTGGACGCACTCGTTGACATG
GGCGTCTCGTTCGAGACTGTCACCAAGAGCTTGGCTTGGAAGACGGCGAAGAAGGATATAGCGGCACGGTTCGAT
GCCTCGAATCTCTTGAATTTCTCCTGGCCGAGCCAGCTGCTCAAAATCAGCAAGATCATCGACATCCCCTGGAGC
ATGGGCATGGTGCGAGCCGAAAAGGCCGGCGCCCTCCTGGCCGATGCCATCATCCGACACAAGTTCCAGGGCGAG
CGCTCCGTCTCCCTCATCGGCTACGGCCTGGCAGCCCGAGCCATCTACACGTGCCTCATGGTGCTGGCCGAGCGT
CGTCAGTTCGGCCTGGTCGACTCGGTCGTCATGATGGGCGCGCCGGCTCCGTCGGAGAGCCGGGTGTGGCTGACT
CTCAAGAGCGTCGTGTCGGGTCGCCTTGTTAACGTTTACTCCAAGCACGACTATCTGCTGGCCTTTTTGTACCGA
ACCTCGAACCTGCACTTTGGCATCGCCGGCCTGCACGAGATTCAGGGGGCGTACGGCGTCGAGAACCACTGCGTC
GGCCAGCTGCCGCGCGGCCACGACGACTATCACAGCCTCACCGGCCGCATCCTCCGGGACATTGCCTGGGAGGGC
GTCGAGGTCGAGGCAGAGCCGCTGTCGGCGCCGCCCAAGCCGGCCAGGAATCCGCGCCCTCACAGGAAGAACCCG
ACGAGACGGCCCAAGGCGGCTCGCTAG
Gene >Ophun1|6032
ATGGGCCGCATGGGCCGCGGAGGCGGTCATTCCGCCTTTCGCCGCATCGACTTGACTGGCCTCCTTTCCATCGCC
GAAAGAAACGACTTGGCGACGCTCGTCAGTGCAATCACCGACAAGATGCACAACGACATCAGCTGCATCTTCGAC
TCGCCCCCCGTCACGCCCCTCATTCATCAGCAGGAACACCATAACTGGCTCTCGAGGGCCATTCTCAACTGCGCA
ATCACCGACCCTCCTGCCGACTTGCCCGGCGATGATGGCTCCAAGGCTTTCGCCAAAGCTCATAAAACAGTGGTC
AAAGAGGAAGCAGAGGCCATGGCACCTCAGCTTCGTGAGCTGAAGAAGGAGGCCCTGCTCTTCTTCACCAAGTGG
CAGACGGCCGTCATTCAGCGCACCCGCGAGATGCAGGTCCAAGACACGCCCGCCGCCAACACTCGAGCTGGCCGC
GGAGGCCGTGGCGGCTATCGCGGTCGCGGAGGCCGTGGAGGCGCCGTTAGAAACGGCCGTTGCGGCTTGACCTTG
GCTACCGGTGAGACTCACCCCCAGTGCTTCTTCTTCGCCCTAAAGACTAAAACGCCTACAGGACCACCCCAGATC
TCTCCCGCTGCTGCTGACCCCGAGCTAGCCACGAGGTTCTCGCCCACTCCCAACACGCTGTGGTCTCTGTCTTTC
GACAAGAGAAAGCTCCTGCTTCATCTCGTCATGCTGCTCGTCTTGTCGCTGCAGGACTACGGAGCCAACGCTCGC
ATTCTCGTGCTGAATCTCGCCTCGTCGCTCAACCTCACATTTGAAATATACCACGAGAACGAGCTTCGAATCTCT
CGCGCTCTCGCCAAGGCCGCCCTCGAATTCAGCTCCAATCAGCAGTCTGACCAGAAGCCCGACGTCAAGGTCAAC
TCTCGTCGGTGGAAGAACTGCCTCGCTGCCGGCTCTCCTGCCAGCGCCGGCCTCGCCGGTCGCCTCAAGGCCGAT
GGTGTCGGCACAATGCAGCACGGCCCTGGCCTCCCTCCTGCTGCCGTGGCAGGACTGCTGGGACCCATGGCGGAC
CATGCTCATCTTCTGAGCAACCTCTTCGGCATCAGCCCCATCAGGCCCGTCAGCAAGATGATCGACAGTTGCTGC
CGCGACATCCAGGACTTTGCCCTGGTCCGCCTGCTCGACGATGGGCAGCACTCCGAGTACCGCGTTGCAGGTGAG
ACGCCGGCCGCAGACCGTCGACTTCACGTAGCTGTTGTCATGAGCGGCTGTCTCTCTCAGAACAGGGACGTGACG
GAGCCGTGGCAGTGCCTCGGCCGCGAGACGGAGACGTACGTGGTCAAATGGGAGGTGGACGCACTCGTTGACATG
GGCGTCTCGTTCGAGACTGTCACCAAGAGCTTGGCTTGGAAGACGGCGAAGAAGGATATAGCGGCACGGTTCGGT
AAGTCACAGCCAAGACGATGCGCTCCTCCTGTCTCGAGACTAACTTGATGGTTGCTAGATGCCTCGAATCTCTTG
AATTTCTCCTGGCCGAGCCAGCTGCTCAAAATCAGCAAGATCATCGACATCCCCTGGAGCATGGGCATGGTGCGA
GCCGAAAAGGCCGGCGCCCTCCTGGCCGATGCCATCATCCGACACAAGTTCCAGGGCGAGCGCTCCGTCTCCCTC
ATCGGCTACGGCCTGGCAGCCCGAGCCATCTACACGTGCCTCATGGTGCTGGCCGAGCGTCGTCAGTTCGGCCTG
GTCGACTCGGTCGTCATGATGGGCGCGCCGGCTCCGTCGGAGAGCCGGGTGTGGCTGACTCTCAAGAGCGTCGTG
TCGGGTCGCCTTGTTAACGTTTACTCCAAGCACGACTATCTGCTGGCCTTTTTGTACCGAACCTCGAACCTGCAC
TTTGGCATCGCCGGCCTGCACGAGATTCAGGGGGCGTACGGCGTCGAGAACCACTGCGTCGGCCAGCTGCCGCGC
GGCCACGACGACTATCACAGCCTCACCGGCCGCATCCTCCGGGACATTGCCTGGGAGGGCGTCGAGGTCGAGGCA
GAGCCGCTGTCGGCGCCGCCCAAGCCGGCCAGGAATCCGCGCCCTCACAGGAAGAACCCGACGAGACGGCCCAAG
GCGGCTCGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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