© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|6032 |
| Gene name | |
| Location | Contig_63:23748..25860 |
| Strand | - |
| Gene length (bp) | 2112 |
| Transcript length (bp) | 2052 |
| Coding sequence length (bp) | 2052 |
| Protein length (aa) | 684 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05277 | DUF726 | Protein of unknown function (DUF726) | 9.0E-85 | 315 | 649 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9US10|YK68_SCHPO | Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC607.08c PE=3 SV=1 | 244 | 645 | 9.0E-45 |
| sp|Q5TGY1|TMCO4_HUMAN | Transmembrane and coiled-coil domain-containing protein 4 OS=Homo sapiens GN=TMCO4 PE=2 SV=1 | 406 | 679 | 1.0E-39 |
| sp|Q91WU4|TMCO4_MOUSE | Transmembrane and coiled-coil domain-containing protein 4 OS=Mus musculus GN=Tmco4 PE=2 SV=2 | 406 | 646 | 1.0E-38 |
| sp|Q499U8|TMCO4_RAT | Transmembrane and coiled-coil domain-containing protein 4 OS=Rattus norvegicus GN=Tmco4 PE=2 SV=1 | 406 | 646 | 3.0E-37 |
| sp|O14244|YELD_SCHPO | Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6F6.13c PE=3 SV=1 | 404 | 667 | 2.0E-33 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9US10|YK68_SCHPO | Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC607.08c PE=3 SV=1 | 244 | 645 | 9.0E-45 |
| sp|Q5TGY1|TMCO4_HUMAN | Transmembrane and coiled-coil domain-containing protein 4 OS=Homo sapiens GN=TMCO4 PE=2 SV=1 | 406 | 679 | 1.0E-39 |
| sp|Q91WU4|TMCO4_MOUSE | Transmembrane and coiled-coil domain-containing protein 4 OS=Mus musculus GN=Tmco4 PE=2 SV=2 | 406 | 646 | 1.0E-38 |
| sp|Q499U8|TMCO4_RAT | Transmembrane and coiled-coil domain-containing protein 4 OS=Rattus norvegicus GN=Tmco4 PE=2 SV=1 | 406 | 646 | 3.0E-37 |
| sp|O14244|YELD_SCHPO | Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6F6.13c PE=3 SV=1 | 404 | 667 | 2.0E-33 |
| sp|P43564|YFD4_YEAST | Uncharacterized membrane protein YFL034W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YFL034W PE=1 SV=2 | 405 | 654 | 3.0E-31 |
| sp|Q20035|TMCO4_CAEEL | Uncharacterized membrane protein F35D11.3 OS=Caenorhabditis elegans GN=F35D11.3 PE=3 SV=2 | 390 | 653 | 1.0E-30 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|6032 MGRMGRGGGHSAFRRIDLTGLLSIAERNDLATLVSAITDKMHNDISCIFDSPPVTPLIHQQEHHNWLSRAILNCA ITDPPADLPGDDGSKAFAKAHKTVVKEEAEAMAPQLRELKKEALLFFTKWQTAVIQRTREMQVQDTPAANTRAGR GGRGGYRGRGGRGGAVRNGRCGLTLATGETHPQCFFFALKTKTPTGPPQISPAAADPELATRFSPTPNTLWSLSF DKRKLLLHLVMLLVLSLQDYGANARILVLNLASSLNLTFEIYHENELRISRALAKAALEFSSNQQSDQKPDVKVN SRRWKNCLAAGSPASAGLAGRLKADGVGTMQHGPGLPPAAVAGLLGPMADHAHLLSNLFGISPIRPVSKMIDSCC RDIQDFALVRLLDDGQHSEYRVAGETPAADRRLHVAVVMSGCLSQNRDVTEPWQCLGRETETYVVKWEVDALVDM GVSFETVTKSLAWKTAKKDIAARFDASNLLNFSWPSQLLKISKIIDIPWSMGMVRAEKAGALLADAIIRHKFQGE RSVSLIGYGLAARAIYTCLMVLAERRQFGLVDSVVMMGAPAPSESRVWLTLKSVVSGRLVNVYSKHDYLLAFLYR TSNLHFGIAGLHEIQGAYGVENHCVGQLPRGHDDYHSLTGRILRDIAWEGVEVEAEPLSAPPKPARNPRPHRKNP TRRPKAAR* |
| Coding | >Ophun1|6032 ATGGGCCGCATGGGCCGCGGAGGCGGTCATTCCGCCTTTCGCCGCATCGACTTGACTGGCCTCCTTTCCATCGCC GAAAGAAACGACTTGGCGACGCTCGTCAGTGCAATCACCGACAAGATGCACAACGACATCAGCTGCATCTTCGAC TCGCCCCCCGTCACGCCCCTCATTCATCAGCAGGAACACCATAACTGGCTCTCGAGGGCCATTCTCAACTGCGCA ATCACCGACCCTCCTGCCGACTTGCCCGGCGATGATGGCTCCAAGGCTTTCGCCAAAGCTCATAAAACAGTGGTC AAAGAGGAAGCAGAGGCCATGGCACCTCAGCTTCGTGAGCTGAAGAAGGAGGCCCTGCTCTTCTTCACCAAGTGG CAGACGGCCGTCATTCAGCGCACCCGCGAGATGCAGGTCCAAGACACGCCCGCCGCCAACACTCGAGCTGGCCGC GGAGGCCGTGGCGGCTATCGCGGTCGCGGAGGCCGTGGAGGCGCCGTTAGAAACGGCCGTTGCGGCTTGACCTTG GCTACCGGTGAGACTCACCCCCAGTGCTTCTTCTTCGCCCTAAAGACTAAAACGCCTACAGGACCACCCCAGATC TCTCCCGCTGCTGCTGACCCCGAGCTAGCCACGAGGTTCTCGCCCACTCCCAACACGCTGTGGTCTCTGTCTTTC GACAAGAGAAAGCTCCTGCTTCATCTCGTCATGCTGCTCGTCTTGTCGCTGCAGGACTACGGAGCCAACGCTCGC ATTCTCGTGCTGAATCTCGCCTCGTCGCTCAACCTCACATTTGAAATATACCACGAGAACGAGCTTCGAATCTCT CGCGCTCTCGCCAAGGCCGCCCTCGAATTCAGCTCCAATCAGCAGTCTGACCAGAAGCCCGACGTCAAGGTCAAC TCTCGTCGGTGGAAGAACTGCCTCGCTGCCGGCTCTCCTGCCAGCGCCGGCCTCGCCGGTCGCCTCAAGGCCGAT GGTGTCGGCACAATGCAGCACGGCCCTGGCCTCCCTCCTGCTGCCGTGGCAGGACTGCTGGGACCCATGGCGGAC CATGCTCATCTTCTGAGCAACCTCTTCGGCATCAGCCCCATCAGGCCCGTCAGCAAGATGATCGACAGTTGCTGC CGCGACATCCAGGACTTTGCCCTGGTCCGCCTGCTCGACGATGGGCAGCACTCCGAGTACCGCGTTGCAGGTGAG ACGCCGGCCGCAGACCGTCGACTTCACGTAGCTGTTGTCATGAGCGGCTGTCTCTCTCAGAACAGGGACGTGACG GAGCCGTGGCAGTGCCTCGGCCGCGAGACGGAGACGTACGTGGTCAAATGGGAGGTGGACGCACTCGTTGACATG GGCGTCTCGTTCGAGACTGTCACCAAGAGCTTGGCTTGGAAGACGGCGAAGAAGGATATAGCGGCACGGTTCGAT GCCTCGAATCTCTTGAATTTCTCCTGGCCGAGCCAGCTGCTCAAAATCAGCAAGATCATCGACATCCCCTGGAGC ATGGGCATGGTGCGAGCCGAAAAGGCCGGCGCCCTCCTGGCCGATGCCATCATCCGACACAAGTTCCAGGGCGAG CGCTCCGTCTCCCTCATCGGCTACGGCCTGGCAGCCCGAGCCATCTACACGTGCCTCATGGTGCTGGCCGAGCGT CGTCAGTTCGGCCTGGTCGACTCGGTCGTCATGATGGGCGCGCCGGCTCCGTCGGAGAGCCGGGTGTGGCTGACT CTCAAGAGCGTCGTGTCGGGTCGCCTTGTTAACGTTTACTCCAAGCACGACTATCTGCTGGCCTTTTTGTACCGA ACCTCGAACCTGCACTTTGGCATCGCCGGCCTGCACGAGATTCAGGGGGCGTACGGCGTCGAGAACCACTGCGTC GGCCAGCTGCCGCGCGGCCACGACGACTATCACAGCCTCACCGGCCGCATCCTCCGGGACATTGCCTGGGAGGGC GTCGAGGTCGAGGCAGAGCCGCTGTCGGCGCCGCCCAAGCCGGCCAGGAATCCGCGCCCTCACAGGAAGAACCCG ACGAGACGGCCCAAGGCGGCTCGCTAG |
| Transcript | >Ophun1|6032 ATGGGCCGCATGGGCCGCGGAGGCGGTCATTCCGCCTTTCGCCGCATCGACTTGACTGGCCTCCTTTCCATCGCC GAAAGAAACGACTTGGCGACGCTCGTCAGTGCAATCACCGACAAGATGCACAACGACATCAGCTGCATCTTCGAC TCGCCCCCCGTCACGCCCCTCATTCATCAGCAGGAACACCATAACTGGCTCTCGAGGGCCATTCTCAACTGCGCA ATCACCGACCCTCCTGCCGACTTGCCCGGCGATGATGGCTCCAAGGCTTTCGCCAAAGCTCATAAAACAGTGGTC AAAGAGGAAGCAGAGGCCATGGCACCTCAGCTTCGTGAGCTGAAGAAGGAGGCCCTGCTCTTCTTCACCAAGTGG CAGACGGCCGTCATTCAGCGCACCCGCGAGATGCAGGTCCAAGACACGCCCGCCGCCAACACTCGAGCTGGCCGC GGAGGCCGTGGCGGCTATCGCGGTCGCGGAGGCCGTGGAGGCGCCGTTAGAAACGGCCGTTGCGGCTTGACCTTG GCTACCGGTGAGACTCACCCCCAGTGCTTCTTCTTCGCCCTAAAGACTAAAACGCCTACAGGACCACCCCAGATC TCTCCCGCTGCTGCTGACCCCGAGCTAGCCACGAGGTTCTCGCCCACTCCCAACACGCTGTGGTCTCTGTCTTTC GACAAGAGAAAGCTCCTGCTTCATCTCGTCATGCTGCTCGTCTTGTCGCTGCAGGACTACGGAGCCAACGCTCGC ATTCTCGTGCTGAATCTCGCCTCGTCGCTCAACCTCACATTTGAAATATACCACGAGAACGAGCTTCGAATCTCT CGCGCTCTCGCCAAGGCCGCCCTCGAATTCAGCTCCAATCAGCAGTCTGACCAGAAGCCCGACGTCAAGGTCAAC TCTCGTCGGTGGAAGAACTGCCTCGCTGCCGGCTCTCCTGCCAGCGCCGGCCTCGCCGGTCGCCTCAAGGCCGAT GGTGTCGGCACAATGCAGCACGGCCCTGGCCTCCCTCCTGCTGCCGTGGCAGGACTGCTGGGACCCATGGCGGAC CATGCTCATCTTCTGAGCAACCTCTTCGGCATCAGCCCCATCAGGCCCGTCAGCAAGATGATCGACAGTTGCTGC CGCGACATCCAGGACTTTGCCCTGGTCCGCCTGCTCGACGATGGGCAGCACTCCGAGTACCGCGTTGCAGGTGAG ACGCCGGCCGCAGACCGTCGACTTCACGTAGCTGTTGTCATGAGCGGCTGTCTCTCTCAGAACAGGGACGTGACG GAGCCGTGGCAGTGCCTCGGCCGCGAGACGGAGACGTACGTGGTCAAATGGGAGGTGGACGCACTCGTTGACATG GGCGTCTCGTTCGAGACTGTCACCAAGAGCTTGGCTTGGAAGACGGCGAAGAAGGATATAGCGGCACGGTTCGAT GCCTCGAATCTCTTGAATTTCTCCTGGCCGAGCCAGCTGCTCAAAATCAGCAAGATCATCGACATCCCCTGGAGC ATGGGCATGGTGCGAGCCGAAAAGGCCGGCGCCCTCCTGGCCGATGCCATCATCCGACACAAGTTCCAGGGCGAG CGCTCCGTCTCCCTCATCGGCTACGGCCTGGCAGCCCGAGCCATCTACACGTGCCTCATGGTGCTGGCCGAGCGT CGTCAGTTCGGCCTGGTCGACTCGGTCGTCATGATGGGCGCGCCGGCTCCGTCGGAGAGCCGGGTGTGGCTGACT CTCAAGAGCGTCGTGTCGGGTCGCCTTGTTAACGTTTACTCCAAGCACGACTATCTGCTGGCCTTTTTGTACCGA ACCTCGAACCTGCACTTTGGCATCGCCGGCCTGCACGAGATTCAGGGGGCGTACGGCGTCGAGAACCACTGCGTC GGCCAGCTGCCGCGCGGCCACGACGACTATCACAGCCTCACCGGCCGCATCCTCCGGGACATTGCCTGGGAGGGC GTCGAGGTCGAGGCAGAGCCGCTGTCGGCGCCGCCCAAGCCGGCCAGGAATCCGCGCCCTCACAGGAAGAACCCG ACGAGACGGCCCAAGGCGGCTCGCTAG |
| Gene | >Ophun1|6032 ATGGGCCGCATGGGCCGCGGAGGCGGTCATTCCGCCTTTCGCCGCATCGACTTGACTGGCCTCCTTTCCATCGCC GAAAGAAACGACTTGGCGACGCTCGTCAGTGCAATCACCGACAAGATGCACAACGACATCAGCTGCATCTTCGAC TCGCCCCCCGTCACGCCCCTCATTCATCAGCAGGAACACCATAACTGGCTCTCGAGGGCCATTCTCAACTGCGCA ATCACCGACCCTCCTGCCGACTTGCCCGGCGATGATGGCTCCAAGGCTTTCGCCAAAGCTCATAAAACAGTGGTC AAAGAGGAAGCAGAGGCCATGGCACCTCAGCTTCGTGAGCTGAAGAAGGAGGCCCTGCTCTTCTTCACCAAGTGG CAGACGGCCGTCATTCAGCGCACCCGCGAGATGCAGGTCCAAGACACGCCCGCCGCCAACACTCGAGCTGGCCGC GGAGGCCGTGGCGGCTATCGCGGTCGCGGAGGCCGTGGAGGCGCCGTTAGAAACGGCCGTTGCGGCTTGACCTTG GCTACCGGTGAGACTCACCCCCAGTGCTTCTTCTTCGCCCTAAAGACTAAAACGCCTACAGGACCACCCCAGATC TCTCCCGCTGCTGCTGACCCCGAGCTAGCCACGAGGTTCTCGCCCACTCCCAACACGCTGTGGTCTCTGTCTTTC GACAAGAGAAAGCTCCTGCTTCATCTCGTCATGCTGCTCGTCTTGTCGCTGCAGGACTACGGAGCCAACGCTCGC ATTCTCGTGCTGAATCTCGCCTCGTCGCTCAACCTCACATTTGAAATATACCACGAGAACGAGCTTCGAATCTCT CGCGCTCTCGCCAAGGCCGCCCTCGAATTCAGCTCCAATCAGCAGTCTGACCAGAAGCCCGACGTCAAGGTCAAC TCTCGTCGGTGGAAGAACTGCCTCGCTGCCGGCTCTCCTGCCAGCGCCGGCCTCGCCGGTCGCCTCAAGGCCGAT GGTGTCGGCACAATGCAGCACGGCCCTGGCCTCCCTCCTGCTGCCGTGGCAGGACTGCTGGGACCCATGGCGGAC CATGCTCATCTTCTGAGCAACCTCTTCGGCATCAGCCCCATCAGGCCCGTCAGCAAGATGATCGACAGTTGCTGC CGCGACATCCAGGACTTTGCCCTGGTCCGCCTGCTCGACGATGGGCAGCACTCCGAGTACCGCGTTGCAGGTGAG ACGCCGGCCGCAGACCGTCGACTTCACGTAGCTGTTGTCATGAGCGGCTGTCTCTCTCAGAACAGGGACGTGACG GAGCCGTGGCAGTGCCTCGGCCGCGAGACGGAGACGTACGTGGTCAAATGGGAGGTGGACGCACTCGTTGACATG GGCGTCTCGTTCGAGACTGTCACCAAGAGCTTGGCTTGGAAGACGGCGAAGAAGGATATAGCGGCACGGTTCGGT AAGTCACAGCCAAGACGATGCGCTCCTCCTGTCTCGAGACTAACTTGATGGTTGCTAGATGCCTCGAATCTCTTG AATTTCTCCTGGCCGAGCCAGCTGCTCAAAATCAGCAAGATCATCGACATCCCCTGGAGCATGGGCATGGTGCGA GCCGAAAAGGCCGGCGCCCTCCTGGCCGATGCCATCATCCGACACAAGTTCCAGGGCGAGCGCTCCGTCTCCCTC ATCGGCTACGGCCTGGCAGCCCGAGCCATCTACACGTGCCTCATGGTGCTGGCCGAGCGTCGTCAGTTCGGCCTG GTCGACTCGGTCGTCATGATGGGCGCGCCGGCTCCGTCGGAGAGCCGGGTGTGGCTGACTCTCAAGAGCGTCGTG TCGGGTCGCCTTGTTAACGTTTACTCCAAGCACGACTATCTGCTGGCCTTTTTGTACCGAACCTCGAACCTGCAC TTTGGCATCGCCGGCCTGCACGAGATTCAGGGGGCGTACGGCGTCGAGAACCACTGCGTCGGCCAGCTGCCGCGC GGCCACGACGACTATCACAGCCTCACCGGCCGCATCCTCCGGGACATTGCCTGGGAGGGCGTCGAGGTCGAGGCA GAGCCGCTGTCGGCGCCGCCCAAGCCGGCCAGGAATCCGCGCCCTCACAGGAAGAACCCGACGAGACGGCCCAAG GCGGCTCGCTAG |