© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|601 |
| Gene name | |
| Location | Contig_119:12911..13756 |
| Strand | - |
| Gene length (bp) | 845 |
| Transcript length (bp) | 789 |
| Coding sequence length (bp) | 789 |
| Protein length (aa) | 263 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06912 | DUF1275 | Protein of unknown function (DUF1275) | 6.1E-49 | 41 | 249 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 32 | 51 | 19 |
| 2 | 58 | 80 | 22 |
| 3 | 90 | 107 | 17 |
| 4 | 120 | 142 | 22 |
| 5 | 152 | 171 | 19 |
| 6 | 210 | 227 | 17 |
| 7 | 232 | 254 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 2534 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|601 MAGPNSVSAGEALPLLGRTKPRTITTWLADDVSRSWADVVLLLCYVVTGLLDSASTQVWGAFVSMQTGNTVYVGL GLASLVSPPASPRLYRSGVSLISFCIGSFLFARFHRRFSPRRRWVLCVSFAVQAVLIVAAALIISMAPPARDDAV DWTVLLPLALVAFQSCGQAVASRALRHNALTSVVLTSIYCDLFSDQDLFARANVERNRRAAAPLLLLLGAVAGGL LAHSSLGISGALWCAAALKLCMVVAWLSWPPESDDSR* |
| Coding | >Ophun1|601 ATGGCCGGGCCCAACTCCGTCTCAGCAGGAGAAGCCTTGCCGCTCCTCGGTCGGACGAAGCCTCGTACCATCACG ACATGGCTCGCAGACGATGTCTCGCGCTCTTGGGCAGATGTCGTCTTGCTGCTCTGCTACGTCGTCACGGGCCTG CTTGACAGTGCATCGACGCAGGTCTGGGGCGCCTTCGTTTCCATGCAGACCGGAAACACCGTCTACGTCGGTCTA GGCCTTGCCTCGCTCGTCTCGCCACCAGCCTCACCACGTCTCTACCGCTCGGGCGTCTCCCTCATCTCGTTCTGT ATCGGGTCTTTTCTCTTTGCCCGCTTTCATCGCCGCTTCTCTCCCCGTCGCCGCTGGGTGCTCTGTGTCTCCTTC GCCGTCCAGGCCGTCCTCATCGTCGCGGCTGCTCTCATTATATCCATGGCGCCGCCGGCTCGTGACGATGCCGTC GACTGGACCGTCTTGCTGCCTCTTGCTCTCGTCGCCTTTCAGAGTTGCGGTCAGGCAGTTGCCAGCCGCGCGCTC CGTCACAATGCTCTGACTAGCGTCGTTCTCACCAGCATCTACTGCGACCTCTTCTCCGACCAGGACCTCTTTGCC CGTGCCAACGTCGAGCGCAACCGCCGCGCTGCCGCTCCCTTGCTGCTACTTCTCGGCGCCGTCGCCGGAGGCCTC TTGGCTCACAGCTCTTTGGGTATCAGCGGTGCTCTGTGGTGCGCCGCCGCCCTCAAGCTCTGCATGGTCGTCGCC TGGCTCTCGTGGCCCCCAGAGAGCGATGATTCGCGGTGA |
| Transcript | >Ophun1|601 ATGGCCGGGCCCAACTCCGTCTCAGCAGGAGAAGCCTTGCCGCTCCTCGGTCGGACGAAGCCTCGTACCATCACG ACATGGCTCGCAGACGATGTCTCGCGCTCTTGGGCAGATGTCGTCTTGCTGCTCTGCTACGTCGTCACGGGCCTG CTTGACAGTGCATCGACGCAGGTCTGGGGCGCCTTCGTTTCCATGCAGACCGGAAACACCGTCTACGTCGGTCTA GGCCTTGCCTCGCTCGTCTCGCCACCAGCCTCACCACGTCTCTACCGCTCGGGCGTCTCCCTCATCTCGTTCTGT ATCGGGTCTTTTCTCTTTGCCCGCTTTCATCGCCGCTTCTCTCCCCGTCGCCGCTGGGTGCTCTGTGTCTCCTTC GCCGTCCAGGCCGTCCTCATCGTCGCGGCTGCTCTCATTATATCCATGGCGCCGCCGGCTCGTGACGATGCCGTC GACTGGACCGTCTTGCTGCCTCTTGCTCTCGTCGCCTTTCAGAGTTGCGGTCAGGCAGTTGCCAGCCGCGCGCTC CGTCACAATGCTCTGACTAGCGTCGTTCTCACCAGCATCTACTGCGACCTCTTCTCCGACCAGGACCTCTTTGCC CGTGCCAACGTCGAGCGCAACCGCCGCGCTGCCGCTCCCTTGCTGCTACTTCTCGGCGCCGTCGCCGGAGGCCTC TTGGCTCACAGCTCTTTGGGTATCAGCGGTGCTCTGTGGTGCGCCGCCGCCCTCAAGCTCTGCATGGTCGTCGCC TGGCTCTCGTGGCCCCCAGAGAGCGATGATTCGCGGTGA |
| Gene | >Ophun1|601 ATGGCCGGGCCCAACTCCGTCTCAGCAGGAGAAGCCTTGCCGCTCCTCGGTCGGACGAAGCCTCGTACCATCACG ACATGGCTCGCAGACGATGTCTCGCGCTCTTGGGCAGATGTCGTCTTGCTGCTCTGCTACGTCGTCACGGGCCTG CTTGACAGTGCATCGACGCAGGTCTGGGGCGCCTTCGTTTCCATGCAGACCGGTGCGTCGGCCCCCGAAAACGCC TCTCCTTTCTCGCGTCTGACGAGACATGCACAGGAAACACCGTCTACGTCGGTCTAGGCCTTGCCTCGCTCGTCT CGCCACCAGCCTCACCACGTCTCTACCGCTCGGGCGTCTCCCTCATCTCGTTCTGTATCGGGTCTTTTCTCTTTG CCCGCTTTCATCGCCGCTTCTCTCCCCGTCGCCGCTGGGTGCTCTGTGTCTCCTTCGCCGTCCAGGCCGTCCTCA TCGTCGCGGCTGCTCTCATTATATCCATGGCGCCGCCGGCTCGTGACGATGCCGTCGACTGGACCGTCTTGCTGC CTCTTGCTCTCGTCGCCTTTCAGAGTTGCGGTCAGGCAGTTGCCAGCCGCGCGCTCCGTCACAATGCTCTGACTA GCGTCGTTCTCACCAGCATCTACTGCGACCTCTTCTCCGACCAGGACCTCTTTGCCCGTGCCAACGTCGAGCGCA ACCGCCGCGCTGCCGCTCCCTTGCTGCTACTTCTCGGCGCCGTCGCCGGAGGCCTCTTGGCTCACAGCTCTTTGG GTATCAGCGGTGCTCTGTGGTGCGCCGCCGCCCTCAAGCTCTGCATGGTCGTCGCCTGGCTCTCGTGGCCCCCAG AGAGCGATGATTCGCGGTGA |