Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5985
Gene name
LocationContig_620:4371..4900
Strand+
Gene length (bp)529
Transcript length (bp)480
Coding sequence length (bp)480
Protein length (aa) 160

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16541 AltA1 Alternaria alternata allergen 1 3.7E-09 31 134

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 5 22 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5985
MRAPIIAGSLFAALAAATAIAVPQAEKIMIHHFAARAEVGPHIIKVKAVAFEISGRDVDGEMCTADNPVFPKPKE
ITPCGSPRFRFTLHRGINRNEFGIHLYYEPTPGIEYHGFGSVPTACRQAKVEGPEHLVCIQAGGARSLALDGSTP
PPDEFYTDE*
Coding >Ophun1|5985
ATGCGCGCCCCAATCATCGCCGGCAGCCTCTTCGCCGCCTTGGCCGCAGCCACTGCAATAGCAGTCCCACAAGCA
GAAAAGATCATGATCCACCACTTCGCAGCTCGAGCCGAAGTGGGCCCCCACATCATCAAGGTCAAGGCCGTCGCC
TTCGAAATCAGCGGCAGAGACGTCGACGGCGAAATGTGCACCGCTGATAATCCAGTATTTCCCAAGCCCAAGGAA
ATAACCCCTTGTGGCTCGCCCCGTTTCCGCTTCACGCTGCATCGCGGAATCAACCGTAACGAATTCGGTATACAT
CTCTATTATGAACCGACTCCGGGCATCGAGTATCATGGCTTTGGCAGCGTGCCGACTGCATGTCGCCAGGCCAAA
GTTGAAGGCCCTGAGCATTTGGTGTGCATACAAGCAGGAGGCGCGCGGAGCCTTGCTCTTGACGGCAGCACCCCC
CCCCCTGATGAGTTTTATACCGACGAGTAG
Transcript >Ophun1|5985
ATGCGCGCCCCAATCATCGCCGGCAGCCTCTTCGCCGCCTTGGCCGCAGCCACTGCAATAGCAGTCCCACAAGCA
GAAAAGATCATGATCCACCACTTCGCAGCTCGAGCCGAAGTGGGCCCCCACATCATCAAGGTCAAGGCCGTCGCC
TTCGAAATCAGCGGCAGAGACGTCGACGGCGAAATGTGCACCGCTGATAATCCAGTATTTCCCAAGCCCAAGGAA
ATAACCCCTTGTGGCTCGCCCCGTTTCCGCTTCACGCTGCATCGCGGAATCAACCGTAACGAATTCGGTATACAT
CTCTATTATGAACCGACTCCGGGCATCGAGTATCATGGCTTTGGCAGCGTGCCGACTGCATGTCGCCAGGCCAAA
GTTGAAGGCCCTGAGCATTTGGTGTGCATACAAGCAGGAGGCGCGCGGAGCCTTGCTCTTGACGGCAGCACCCCC
CCCCCTGATGAGTTTTATACCGACGAGTAG
Gene >Ophun1|5985
ATGCGCGCCCCAATCATCGCCGGCAGCCTCTTCGCCGCCTTGGCCGCAGCCACTGCAATAGCAGTCCCACAAGCA
GAAAAGATCATGATCCACCACTTCGCAGCTCGAGCCGAAGTGGGCCCCCACATCATCAAGGTCAAGGCCGTCGCC
TTCGAAATCAGCGGCAGAGACGTCGACGGCGAAATGTGCACCGCTGATAATCCAGTATTTCCCAAGCCCAAGGAA
ATAACCCCTTGTGGCTCGCCCCGTTTCCGCTTCACGCTGCATCGCGGAATCAACCGTAACGAATTCGGTATACAT
CTCTATTATGAACCGACTCCGGGGTGAGTCTTGTTCTCGAGGTTAACTGCTGCATCTAACATACTTGATTAGCAT
CGAGTATCATGGCTTTGGCAGCGTGCCGACTGCATGTCGCCAGGCCAAAGTTGAAGGCCCTGAGCATTTGGTGTG
CATACAAGCAGGAGGCGCGCGGAGCCTTGCTCTTGACGGCAGCACCCCCCCCCCTGATGAGTTTTATACCGACGA
GTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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