© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|5968 |
| Gene name | |
| Location | Contig_62:7786..10023 |
| Strand | + |
| Gene length (bp) | 2237 |
| Transcript length (bp) | 1560 |
| Coding sequence length (bp) | 1560 |
| Protein length (aa) | 520 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00860 | Xan_ur_permease | Permease family | 2.3E-27 | 39 | 425 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94300|YOOH_SCHPO | Putative xanthine/uracil permease C887.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.17 PE=3 SV=1 | 1 | 484 | 6.0E-177 |
| sp|Q9SRK7|AZG1_ARATH | Adenine/guanine permease AZG1 OS=Arabidopsis thaliana GN=AZG1 PE=2 SV=1 | 1 | 447 | 3.0E-123 |
| sp|Q84MA8|AZG2_ARATH | Adenine/guanine permease AZG2 OS=Arabidopsis thaliana GN=AZG2 PE=2 SV=1 | 1 | 439 | 3.0E-91 |
| sp|Q57772|Y326_METJA | Putative permease MJ0326 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0326 PE=3 SV=1 | 1 | 443 | 3.0E-57 |
| sp|O34978|PBUO_BACSU | Guanine/hypoxanthine permease PbuO OS=Bacillus subtilis (strain 168) GN=pbuO PE=1 SV=1 | 66 | 439 | 1.0E-48 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94300|YOOH_SCHPO | Putative xanthine/uracil permease C887.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.17 PE=3 SV=1 | 1 | 484 | 6.0E-177 |
| sp|Q9SRK7|AZG1_ARATH | Adenine/guanine permease AZG1 OS=Arabidopsis thaliana GN=AZG1 PE=2 SV=1 | 1 | 447 | 3.0E-123 |
| sp|Q84MA8|AZG2_ARATH | Adenine/guanine permease AZG2 OS=Arabidopsis thaliana GN=AZG2 PE=2 SV=1 | 1 | 439 | 3.0E-91 |
| sp|Q57772|Y326_METJA | Putative permease MJ0326 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0326 PE=3 SV=1 | 1 | 443 | 3.0E-57 |
| sp|O34978|PBUO_BACSU | Guanine/hypoxanthine permease PbuO OS=Bacillus subtilis (strain 168) GN=pbuO PE=1 SV=1 | 66 | 439 | 1.0E-48 |
| sp|P31440|ADEQ_ECOLI | Adenine permease AdeQ OS=Escherichia coli (strain K12) GN=adeQ PE=1 SV=3 | 33 | 439 | 5.0E-48 |
| sp|O34987|PBUG_BACSU | Guanine/hypoxanthine permease PbuG OS=Bacillus subtilis (strain 168) GN=pbuG PE=1 SV=1 | 1 | 437 | 1.0E-46 |
| sp|P31466|ADEP_ECOLI | Adenine permease AdeP OS=Escherichia coli (strain K12) GN=adeP PE=1 SV=2 | 33 | 439 | 6.0E-41 |
| sp|P0AF52|GHXP_ECOLI | Guanine/hypoxanthine permease GhxP OS=Escherichia coli (strain K12) GN=ghxP PE=1 SV=1 | 49 | 431 | 1.0E-32 |
| sp|P0AF53|GHXP_ECO57 | Guanine/hypoxanthine permease GhxP OS=Escherichia coli O157:H7 GN=ghxP PE=3 SV=1 | 49 | 431 | 1.0E-32 |
| sp|P44530|Y125_HAEIN | Putative permease HI_0125 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0125 PE=3 SV=1 | 32 | 431 | 1.0E-28 |
| sp|Q46817|GHXQ_ECOLI | Guanine/hypoxanthine permease GhxQ OS=Escherichia coli (strain K12) GN=ghxQ PE=1 SV=2 | 288 | 459 | 1.0E-15 |
| sp|Q46817|GHXQ_ECOLI | Guanine/hypoxanthine permease GhxQ OS=Escherichia coli (strain K12) GN=ghxQ PE=1 SV=2 | 49 | 168 | 8.0E-11 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 52 | 74 | 22 |
| 2 | 94 | 116 | 22 |
| 3 | 136 | 158 | 22 |
| 4 | 192 | 209 | 17 |
| 5 | 214 | 233 | 19 |
| 6 | 276 | 298 | 22 |
| 7 | 319 | 341 | 22 |
| 8 | 356 | 378 | 22 |
| 9 | 399 | 421 | 22 |
| 10 | 426 | 448 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 249 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5968 MAYIIAVNASLLSQTGGTCICEQRPHELCDTIPEFRACKEEVRRELITATAAVAGMASIVFGALTNLPVALAPGM GLNAYFAFQVVGVNGSGNISYRTALTAVFFEGLIFVVLALTGLRQWLVRLIPATIKTATGVGIGLFLTEIGLSYS VGIGAITGGGKATPLALGGCPLELIDQQSGMCQSGQMTSPKMWTGVICGGIVTSFLMAFRVKYAFVIGIAIVSVL SWPRHTSISYFPDTDEGNARFAFFQQVVAWHPIRHVANSLDWAFTAGGSHFALALFTFLYVDIIDATATLYSMAR FCGVADRRDGDFPRSTLAYCTDAVFISVGALLGSSPVTVFIESGAGIAEGGRTGLTAIVAGLCFVASIFFAPIFA SIPPWATGCTLVLVGCMMMRQISLINWNYFGDVLPSFVVIAFIPFSYSVAYGLIAGLFVYAVLNGLVGLVVLLSG GRFEPREYELKEYWTWKGGGRPPWFVRAINAHRRRRDAVRELETDDGRGSSLRDSRADSAPKEFPVPAT* |
| Coding | >Ophun1|5968 ATGGCATACATCATCGCCGTCAACGCCTCACTCCTTTCGCAAACGGGCGGGACGTGCATCTGCGAGCAGCGACCG CACGAGCTCTGCGATACGATCCCGGAGTTTAGGGCCTGCAAGGAAGAGGTTAGGAGGGAGTTGATTACCGCGACG GCGGCGGTTGCGGGGATGGCGTCGATTGTTTTTGGGGCGTTGACGAATTTGCCTGTTGCGCTTGCCCCCGGAATG GGCCTCAACGCCTACTTCGCCTTCCAAGTCGTCGGCGTCAACGGCTCAGGCAACATCTCGTACCGCACCGCCCTC ACCGCCGTCTTCTTCGAAGGCCTCATCTTCGTCGTCCTCGCCCTCACCGGCCTCCGCCAGTGGCTCGTCCGCCTG ATTCCCGCGACCATCAAGACAGCCACCGGTGTCGGCATCGGCCTCTTCCTCACTGAGATCGGCCTCTCGTACTCG GTCGGCATCGGTGCCATTACCGGAGGCGGAAAAGCTACTCCTCTCGCTCTCGGCGGCTGTCCGCTCGAGCTCATC GATCAGCAGTCAGGCATGTGTCAGTCCGGCCAGATGACGAGCCCCAAGATGTGGACGGGTGTCATCTGCGGAGGC ATCGTCACCTCGTTCCTCATGGCCTTTCGCGTCAAGTACGCGTTTGTCATTGGCATCGCCATCGTTTCCGTCCTC TCCTGGCCCCGTCATACCTCCATCTCCTACTTCCCCGACACAGACGAAGGCAACGCCCGCTTCGCCTTCTTCCAG CAAGTCGTCGCCTGGCATCCCATCCGCCACGTCGCCAACAGCCTCGACTGGGCATTCACCGCCGGCGGCTCGCAC TTTGCCCTCGCTCTCTTCACCTTTCTCTACGTCGACATCATCGACGCCACCGCAACGCTCTACTCCATGGCCCGC TTCTGCGGCGTCGCTGACCGTCGTGACGGCGACTTTCCGCGCTCCACGCTCGCGTACTGCACCGACGCCGTCTTC ATCTCCGTCGGCGCTCTGCTGGGCTCCTCGCCCGTTACCGTCTTTATCGAGAGCGGTGCCGGTATTGCTGAGGGG GGACGGACCGGGCTGACGGCTATTGTCGCTGGCTTGTGCTTTGTTGCCTCCATCTTCTTCGCCCCGATCTTTGCG TCGATTCCGCCCTGGGCCACGGGCTGTACACTAGTTCTGGTCGGCTGCATGATGATGCGTCAAATCAGCCTCATT AACTGGAACTACTTTGGAGACGTCCTCCCCTCCTTTGTTGTCATCGCCTTTATCCCTTTTAGCTACAGCGTCGCC TACGGCCTCATAGCCGGCCTCTTCGTCTACGCCGTGCTCAACGGCCTCGTCGGCCTCGTCGTCCTCCTCAGCGGC GGCCGTTTCGAGCCCCGGGAGTATGAGTTAAAGGAGTACTGGACCTGGAAAGGCGGAGGCCGTCCGCCCTGGTTC GTCAGAGCCATCAACGCCCATCGTCGTCGTAGGGACGCCGTTCGCGAGCTTGAGACGGATGACGGCCGCGGGTCC TCGCTTCGTGACTCTCGCGCTGATTCTGCGCCTAAGGAGTTCCCCGTGCCCGCTACGTGA |
| Transcript | >Ophun1|5968 ATGGCATACATCATCGCCGTCAACGCCTCACTCCTTTCGCAAACGGGCGGGACGTGCATCTGCGAGCAGCGACCG CACGAGCTCTGCGATACGATCCCGGAGTTTAGGGCCTGCAAGGAAGAGGTTAGGAGGGAGTTGATTACCGCGACG GCGGCGGTTGCGGGGATGGCGTCGATTGTTTTTGGGGCGTTGACGAATTTGCCTGTTGCGCTTGCCCCCGGAATG GGCCTCAACGCCTACTTCGCCTTCCAAGTCGTCGGCGTCAACGGCTCAGGCAACATCTCGTACCGCACCGCCCTC ACCGCCGTCTTCTTCGAAGGCCTCATCTTCGTCGTCCTCGCCCTCACCGGCCTCCGCCAGTGGCTCGTCCGCCTG ATTCCCGCGACCATCAAGACAGCCACCGGTGTCGGCATCGGCCTCTTCCTCACTGAGATCGGCCTCTCGTACTCG GTCGGCATCGGTGCCATTACCGGAGGCGGAAAAGCTACTCCTCTCGCTCTCGGCGGCTGTCCGCTCGAGCTCATC GATCAGCAGTCAGGCATGTGTCAGTCCGGCCAGATGACGAGCCCCAAGATGTGGACGGGTGTCATCTGCGGAGGC ATCGTCACCTCGTTCCTCATGGCCTTTCGCGTCAAGTACGCGTTTGTCATTGGCATCGCCATCGTTTCCGTCCTC TCCTGGCCCCGTCATACCTCCATCTCCTACTTCCCCGACACAGACGAAGGCAACGCCCGCTTCGCCTTCTTCCAG CAAGTCGTCGCCTGGCATCCCATCCGCCACGTCGCCAACAGCCTCGACTGGGCATTCACCGCCGGCGGCTCGCAC TTTGCCCTCGCTCTCTTCACCTTTCTCTACGTCGACATCATCGACGCCACCGCAACGCTCTACTCCATGGCCCGC TTCTGCGGCGTCGCTGACCGTCGTGACGGCGACTTTCCGCGCTCCACGCTCGCGTACTGCACCGACGCCGTCTTC ATCTCCGTCGGCGCTCTGCTGGGCTCCTCGCCCGTTACCGTCTTTATCGAGAGCGGTGCCGGTATTGCTGAGGGG GGACGGACCGGGCTGACGGCTATTGTCGCTGGCTTGTGCTTTGTTGCCTCCATCTTCTTCGCCCCGATCTTTGCG TCGATTCCGCCCTGGGCCACGGGCTGTACACTAGTTCTGGTCGGCTGCATGATGATGCGTCAAATCAGCCTCATT AACTGGAACTACTTTGGAGACGTCCTCCCCTCCTTTGTTGTCATCGCCTTTATCCCTTTTAGCTACAGCGTCGCC TACGGCCTCATAGCCGGCCTCTTCGTCTACGCCGTGCTCAACGGCCTCGTCGGCCTCGTCGTCCTCCTCAGCGGC GGCCGTTTCGAGCCCCGGGAGTATGAGTTAAAGGAGTACTGGACCTGGAAAGGCGGAGGCCGTCCGCCCTGGTTC GTCAGAGCCATCAACGCCCATCGTCGTCGTAGGGACGCCGTTCGCGAGCTTGAGACGGATGACGGCCGCGGGTCC TCGCTTCGTGACTCTCGCGCTGATTCTGCGCCTAAGGAGTTCCCCGTGCCCGCTACGTGA |
| Gene | >Ophun1|5968 ATGGCATACATCATCGCCGTCAACGTCCGTTCCCTTCCTCCTCGTCCCCTCATACTCCCTTGCTAAGTTGGAGAA TCTACAGGCCTCACTCCTTTCGCAAACGGGCGGGACGTGCATCTGCGAGCAGCGACCGCACGAGCTCTGCGATAC GATCCCGGAGTTTAGGGCCTGCAAGGAAGGTTTGTTTCGTTTCGTTTCGTTTCGTTTCGTTTCGTCGGGTAGGGC TGTGCTGATGGGTTTGGAAGAGGTTAGGAGGGAGTTGATTACCGCGACGGCGGCGGTTGCGGGGATGGCGTCGAT TGTTTTTGGGGCGTTGACGAATTTGCCTGTTGCGCTTGCGTACGTATTCTCTCGTCTTCTCTCGACTGGTCTGTC GTTGCTTCTGTTGTTGTTGTGTTGGTCCATCTCTGTTGTTTATCTTATCCTTATCATTGTTCTTTTCATCTTCCA TCGTGCTTCTTCTGCCTCATCTGTTATCGTTCTTCCGTCCTCCTTCTATCGCTCTTCTATCTTATCCTTATCTCT GCTCTTCTTCCAACTACATCTCTCACAAAGCATTCTCTGCCATCTCCATCATCTCTTCCCTTCTTCCTTTCTTCA TCTCGTCACATCCTTCTATACAACCGTCTCCTCTTCCCTTCCCCCTATCCTCATCTTCACCCTCATCTTCACCCT CATCTTCACCCTCATCTTCTCCGCCCTCACCACCACAATGACCACGCTGACACCCCCAGCAGCCCCGGAATGGGC CTCAACGCCTACTTCGCCTTCCAAGTCGTCGGCGTCAACGGCTCAGGCAACATCTCGTACCGCACCGCCCTCACC GCCGTCTTCTTCGAAGGCCTCATCTTCGTCGTCCTCGCCCTCACCGGCCTCCGCCAGTGGCTCGTCCGCCTGATT CCCGCGACCATCAAGACAGCCACCGGTGTCGGCATCGGCCTCTTCCTCACTGAGATCGGCCTCTCGTACTCGGTC GGCATCGGTGCCATTACCGGAGGCGGAAAAGCTACTCCTCTCGCTCTCGGCGGCTGTCCGCTCGAGCTCATCGAT CAGCAGTCAGGCATGTGTCAGTCCGGCCAGATGACGAGCCCCAAGATGTGGACGGGTGTCATCTGCGGAGGCATC GTCACCTCGTTCCTCATGGCCTTTCGCGTCAAGTACGCGTTTGTCATTGGCATCGCCATCGTTTCCGTCCTCTCC TGGCCGTGAGTCACGTCCCATGACCCTCCTCTTGCACCATCTCCCCTGACTACCTCGTCATAGCCGTCATACCTC CATCTCCTACTTCCCCGACACAGACGAAGGCAACGCCCGCTTCGCCTTCTTCCAGCAAGTCGTCGCCTGGCATCC CATCCGCCACGTCGCCAACAGCCTCGACTGGGCATTCACCGCCGGCGGCTCGCACTTTGCCCTCGCTCTCTTCAC CTTTCTCTACGTCGACATCATCGACGCCACCGCAACGCTCTACTCCATGGCCCGCTTCTGCGGCGTCGCTGACCG TCGTGACGGCGACTTTCCGCGCTCCACGCTCGCGTACTGCACCGACGCCGTCTTCATCTCCGTCGGCGCTCTGCT GGGCTCCTCGCCCGTTACCGTCTTTATCGAGAGCGGTGCCGGTATTGCTGAGGGGGGACGGACCGGGCTGACGGC TATTGTCGCTGGCTTGTGCTTTGTTGCCTCCATCTTCTTCGCCCCGATCTTTGCGTCGATTCCGCCCTGGGCCAC GGGCTGTACACTAGTTCTGGTAAGTCTCTTGTGATCCTCTCATTCTTATGAAGACTTACACGATGCAAGGTCGGC TGCATGATGATGCGTCAAATCAGCCTCATTAACTGGAACTACTTTGGAGACGTCCTCCCCTCCTTTGTTGTCATC GCCTTTATCCCTTTTAGCTACAGCGTCGCCTACGGCCTCATAGCGTACGTCCATCTCCATGCCAGTTTTTTCAAT TGCTAACACCTCACAGCGGCCTCTTCGTCTACGCCGTGCTCAACGGCCTCGTCGGCCTCGTCGTCCTCCTCAGCG GCGGCCGTTTCGAGCCCCGGGAGTATGAGTTAAAGGAGTACTGGACCTGGAAAGGCGGAGGCCGTCCGCCCTGGT TCGTCAGAGCCATCAACGCCCATCGTCGTCGTAGGGACGCCGTTCGCGAGCTTGAGACGGATGACGGCCGCGGGT CCTCGCTTCGTGACTCTCGCGCTGATTCTGCGCCTAAGGAGTTCCCCGTGCCCGCTACGTGA |